Details from NCBI annotation

Gene Symbol Trmt13
Gene Name tRNA methyltransferase 13 homolog (S. cerevisiae)
Entrez Gene ID 101721354

Database interlinks

Part of NW_004624857.1 (Scaffold)

For more information consult the page for NW_004624857.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRMT13 ENSCPOG00000000694 (Guinea pig)

Gene Details

tRNA methyltransferase 13 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000616, Guinea pig)

Protein Percentage 95.64%
CDS Percentage 95.47%
Ka/Ks Ratio 0.14783 (Ka = 0.0206, Ks = 0.1396)

TRMT13 ENSG00000122435 (Human)

Gene Details

tRNA methyltransferase 13 homolog (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000359160, Human)

Protein Percentage 91.06%
CDS Percentage 92.38%
Ka/Ks Ratio 0.20557 (Ka = 0.0442, Ks = 0.2148)

Trmt13 ENSMUSG00000033439 (Mouse)

Gene Details

tRNA methyltransferase 13

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047320, Mouse)

Protein Percentage 87.08%
CDS Percentage 87.29%
Ka/Ks Ratio 0.16588 (Ka = 0.0703, Ks = 0.4241)

Trmt13 ENSRNOG00000015140 (Rat)

Gene Details

tRNA methyltransferase 13 homolog (S. cerevisiae) (Trmt13), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062314, Rat)

Protein Percentage 87.29%
CDS Percentage 88.96%
Ka/Ks Ratio 0.20475 (Ka = 0.0675, Ks = 0.3294)

Genome Location

Sequence Coding sequence

Length: 1446 bp    Location: 2930566..2948364   Strand: +
>XM_004869123.1
ATGGCAGCTTCTGCGCCGACACAATCCGCGACTGGTTTTCCAGCTGAGGGTAGATGCAGTTACTACGTAGAAAAGAAGAAGCGGTTCTGCAGGATGGTGGTGGCTGCAGGAAAAAGGTTCTGTGGTGAACACGCTGGAGCTGCGGAGGAAGAAAATGCTCGGAAAAGAATCCTGTGTCCTTTAGATCCAAAACACACAGTATATGAAGATCAACTAGCAAAGCATCTGAAAAAATGTAACTCAAGAGAGAAGCCAAAGCCTGATTTCTTTATTCAGGATATTAATGCAGGCTTAAAAGATGAAACAGAAATACCTGAACAACTAGTTCCAATTTCTTCTCTATCTGAAGAGCAGTTGGAAAACTTAATTAAGAAATTGAGAAAAGCAAGTAAAGATTTGAATTCTACACTTGAAGATCACATTATGTCCCATCCAGCATTACATGATGCCCTTAATGACCCTAAAAATGGTGATTCTGCAGTCAAGCACCTAAAGCAGCAGGCTTCTCTTTTAGGTAACATTGAAAAATTAAAATTACTTGGCCCAAGAAGATGCTTTGTTGAGTTTGGAGCAGGAAAGGGAAAATTATCTCACTGGGTTGATATTGCTTTAAAAGATGCTGAAAAAGTTCACTTCATCCTAGTAGAAAAAGTGACCACAAGATTCAAGGTAGATGGTAAACACAGAAAGAAAAATTCAGTGTTTGAAAGACTTCAAATTGATATTCAACACTTATGTTTGAACAAGATTCCTGTTCTAAGAGAAGGAAGACTGCCTGTGGTAGGAATTGGAAAACATCTCTGTGGTGTGGCAACAGATCTTGCATTACGATGTTTGGTTGAAACCTATGCTGCCAGTTATGAGGAAAGGAATGAAGAACCTTTAGCCAAACGCATAAAGAATGATAAAACAGAAAAAGAAATTAACACTTTGACCAAGGAAGGAAGTGAAAAAAATGTCGCAGAGAAGTGGACTCCTGTGGCTGGCATTGTTATTGCACTCTGTTGTCACCACAGGTGTGATTGGAGACATTATGTGGGCAAAGAATATTTCAGGGCGCTAGGCCTTGGAGCAGTGGAATTCCACTATTTCCAGAGAATGAGTAGTTGGGCGACTTGTGGGATGCAGAAAACATCGTTGGAAACTTCAGATATTACTACAAAGAGAAAAGATGATCAGAATGATGATAACGAAGAGCATGACAGTGGAGAATGCAGAATCACAGATGAGAGCACTGACAGCTTACCTGGGCTTCTTACTGTTGAAGAAAAGAAGAAAATAGGACATCTTTGTAAATTGCTGATTGACCAAGGCCGTATCCAGTATTTAGAGCAGAAGGGATTTAATCCTGCTTTACAATACTATACAGACCCTTTGGTGTCTTTGGAAAATGTATTGTTAACTGCTTTACCTATTCATTCTTCATCACCAGAAACAACTGCCTAA

Related Sequences

XP_004869180.1 Protein

Trmt13 PREDICTED: tRNA:m(4)X modification enzyme TRM13 homolog [Heterocephalus glaber]

Length: 481 aa      View alignments
>XP_004869180.1
MAASAPTQSATGFPAEGRCSYYVEKKKRFCRMVVAAGKRFCGEHAGAAEEENARKRILCPLDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDETEIPEQLVPISSLSEEQLENLIKKLRKASKDLNSTLEDHIMSHPALHDALNDPKNGDSAVKHLKQQASLLGNIEKLKLLGPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQIDIQHLCLNKIPVLREGRLPVVGIGKHLCGVATDLALRCLVETYAASYEERNEEPLAKRIKNDKTEKEINTLTKEGSEKNVAEKWTPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGAVEFHYFQRMSSWATCGMQKTSLETSDITTKRKDDQNDDNEEHDSGECRITDESTDSLPGLLTVEEKKKIGHLCKLLIDQGRIQYLEQKGFNPALQYYTDPLVSLENVLLTALPIHSSSPETTA