Details from NCBI annotation

Gene Symbol Palmd
Gene Name palmdelphin
Entrez Gene ID 101716376

Database interlinks

Part of NW_004624857.1 (Scaffold)

For more information consult the page for NW_004624857.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PALMD ENSCPOG00000020596 (Guinea pig)

Gene Details

palmdelphin

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000014629, Guinea pig)

Protein Percentage 88.46%
CDS Percentage 89.93%
Ka/Ks Ratio 0.23349 (Ka = 0.0647, Ks = 0.277)

PALMD ENSG00000099260 (Human)

Gene Details

palmdelphin

External Links

Gene Match (Ensembl Protein ID: ENSP00000263174, Human)

Protein Percentage 85.45%
CDS Percentage 87.64%
Ka/Ks Ratio 0.21338 (Ka = 0.0784, Ks = 0.3675)

Palmd ENSMUSG00000033377 (Mouse)

Gene Details

palmdelphin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000044693, Mouse)

Protein Percentage 79.78%
CDS Percentage 81.91%
Ka/Ks Ratio 0.17661 (Ka = 0.1207, Ks = 0.6836)

Palmd ENSRNOG00000016508 (Rat)

Gene Details

palmdelphin (Palmd), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022615, Rat)

Protein Percentage 79.74%
CDS Percentage 82.06%
Ka/Ks Ratio 0.1917 (Ka = 0.1212, Ks = 0.6321)

Genome Location

Sequence Coding sequence

Length: 1656 bp    Location: 2439752..2510138   Strand: +
>XM_004869108.1
ATGGAAGAAGCTGAGCTGGTGAAGGGAAGACTCCAAGCCATCACAGACAAAAGAAAAATACAGGAAGAAATCTCACAGAAACGTCTGAAAATAGAAGAAGAAAAACTAAAACACCAACATTTGAAGAAAAAAGCCTTGAGGGAGAAATGGCTTCTGGATGGGATCAGCAACGGAAAAGAACAAGAAGAGATGAAGAAGCAAAATCAACAAGACCAGCATCAGATCCAGGTTCTAGAACAAAGTATCCACAGGCTTGAGAAAGAGATCCAAGATCTTGAAAAGGTTGAACTGGAAATCTCAACCAATGAAGAGGCAATTTTAAAGAAACTAAAATCAATTGAGAGGACAACAGAAGATATAATAAGATCTGTGAAGGAAGAAAAGGAAGAAACATCAAGAGAGTCCATTGAGGATATCTATGCTAACATCCCTGACCTTCCAAAATATTACATACCTTCCAGATTAAGGAAGGAAAGAAATGAAGGACTGGAAGATGATGAACAAAATAGAAAAGCACTGTATGCCATGGAAATTAAAGTTGAAAAAGACTTGAAGACTGGGGAAAGTACAGTTCTGTCTTCGATACCTCTCCCATCAGATGACTTTAAAGGTACAGGAATCAAAGTTTATGATGACGGACAAAAGTCAGTGTATGCAGTAAGCTCTAATCACTGTGCAGCATACAATGGCACCGATGGCCTGGCACCAGTTGAGGTGGAGGAACTTCTAAGACAAGCCTCAGAGAGAAACTCTAAATCTCCAACTGAATATCATGAGCCTGTGTATGCCAATCCATTTTGCAGACCCACAGCCCCGCAGAGAGAAAAGGCAACCCCTGGACCAAATTTTCAAGAAAGGATAAAGATTAAAGCTAATGGACTGAGCGACGATGTAAATGACTCCATACTCAATATGGACAATGGACTTTCAGAGGAGAGGAGCATCAGAGTCAATCACATCAGCCCCATTCAGCCAATACCTCATCCCCGATCAATAACTCAACAAGCAGATGAGATGTCCCACGCCCCAAAAAAGATGATGACTCCTTGGGAAGACTCAAATGCCATTCAGGACAAATATGATGCACCCTCTCCAAAAACCAGAGTGAGCCCCAGCAAAGCAACACTTGGGAAGTCAGAACACCAGGGCTCTTCTCCCACTTGCCAAGGGGAAGAAGAAGATGTTAGATATAATATCATTCACTCATTGCCTCCTGACATGGATAATTCAAAACCTGTGACCATGATTTTCATGGGGTATCAGCAGGCAGAGGACAATGAAGAAGACAAAAAACTTCTGACGGGGTATGATGGGATCATCCACGCTGAGCTAGTTGTGATTGATGATGAGACAGAGGAGGATGAAGGAGAAGCTGAACAGCTGTCCTATCACCCCGTAGCGCCCTGTATTCAGGTTTACCAGCCACCCAAACCCACACCACTTCCTAGAAAGAGACCTGAAGTGAATCCTCATGAAAACTCAAACCATAAATCTCCCCACAAAAATTCAATATCTCTGAAAGAACAAGAAGAAAGTTTAGGTGGCCCTGCCCACCATTCTCCAATTGATGTTCCGATAGCCGGGGATGGGACTGAGGATCCATCTTTAACAGCTCTAAGGATGAGAATGGCAAAGCTTGGGAAAAAAGTGATCTGA

Related Sequences

XP_004869165.1 Protein

Palmd PREDICTED: palmdelphin [Heterocephalus glaber]

Length: 551 aa      View alignments
>XP_004869165.1
MEEAELVKGRLQAITDKRKIQEEISQKRLKIEEEKLKHQHLKKKALREKWLLDGISNGKEQEEMKKQNQQDQHQIQVLEQSIHRLEKEIQDLEKVELEISTNEEAILKKLKSIERTTEDIIRSVKEEKEETSRESIEDIYANIPDLPKYYIPSRLRKERNEGLEDDEQNRKALYAMEIKVEKDLKTGESTVLSSIPLPSDDFKGTGIKVYDDGQKSVYAVSSNHCAAYNGTDGLAPVEVEELLRQASERNSKSPTEYHEPVYANPFCRPTAPQREKATPGPNFQERIKIKANGLSDDVNDSILNMDNGLSEERSIRVNHISPIQPIPHPRSITQQADEMSHAPKKMMTPWEDSNAIQDKYDAPSPKTRVSPSKATLGKSEHQGSSPTCQGEEEDVRYNIIHSLPPDMDNSKPVTMIFMGYQQAEDNEEDKKLLTGYDGIIHAELVVIDDETEEDEGEAEQLSYHPVAPCIQVYQPPKPTPLPRKRPEVNPHENSNHKSPHKNSISLKEQEESLGGPAHHSPIDVPIAGDGTEDPSLTALRMRMAKLGKKVI