Sequence details NCBI ID: XM_004868937.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Gtf3c3
Gene Name general transcription factor IIIC, polypeptide 3, 102kDa
Entrez Gene ID 101710433

Database interlinks

Part of NW_004624854.1 (Scaffold)

For more information consult the page for NW_004624854.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

GTF3C3 ENSCPOG00000006643 (Guinea pig)

Gene Details

general transcription factor IIIC, polypeptide 3, 102kDa

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005982, Guinea pig)

Protein Percentage 91.83%
CDS Percentage 87.53%
Ka/Ks Ratio 0.0784 (Ka = 0.0447, Ks = 0.5696)

GTF3C3 ENSG00000119041 (Human)

Gene Details

general transcription factor IIIC, polypeptide 3, 102kDa

External Links

Gene Match (Ensembl Protein ID: ENSP00000263956, Human)

Protein Percentage 90.83%
CDS Percentage 84.3%
Ka/Ks Ratio 0.06735 (Ka = 0.0498, Ks = 0.7397)

Gtf3c3 ENSMUSG00000041303 (Mouse)

Gene Details

general transcription factor IIIC, polypeptide 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000039420, Mouse)

Protein Percentage 89.46%
CDS Percentage 82.77%
Ka/Ks Ratio 0.06692 (Ka = 0.0575, Ks = 0.8593)

Gtf3c3 ENSRNOG00000002091 (Rat)

Gene Details

general transcription factor IIIC, polypeptide 3 (Gtf3c3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002864, Rat)

Protein Percentage 88.9%
CDS Percentage 82.6%
Ka/Ks Ratio 0.06878 (Ka = 0.06, Ks = 0.8727)

Genome Location

Sequence Coding sequence

Length: 2655 bp    Location: 333579..362324   Strand: +
Raw sequence   
>XM_004868937.1
ATGTCCGGCTTCAGCCCCGAGCTCATCGACTACCTGGAGGGGAAGATTTCCTTCGAGGAGTTCGAGCGGCGGAGAGAAGAGAGGAAGACGCGGGAGAAGAAGAGTCTTCAGGAAGAAGGAAAGTTATCAGCCGAAGAAAATGCGGATGACTCTGAAGCTCCCTCATCCTCAGGGATTAACTCTAGCAAATCCCACGTCAGAGATGTCAGTGAAGGAGAAACTTCAGATGGGGTGAGTAAGTCGGTTCAGAAGGTCTTTGACTCCATGCTCGGAGAGACTGAAGATGATGAGGAAGAAGAGGAGGAGGAAGAGGAAGGGGAGGAGATGCTTGAGCAACCCACAGCGGGTGAGGTGTTTGCACTGGAGCTAGTTCTTAACCGCGAAACCAAGAAAATGATGAAAGAGAAGAGGCCTCGGAGCAAACTGCCCAGGGCGCTGCGAGGTCTCATGGGCGAAGCCAACATCCGCTTCGCGCGGGGGAAGCGGGAAGAGGCCATCCTGATGTGCATGGAGATCATCCGGCAAGCTCCTCTGGCTTATGAGCCGTTCTCTACTCTTGCCATGATATACGAGGACCAAGGCGACATGGAGAAATCCTTGCAGTTTGAATTGATTGCCGCACATTTAAATCCCAGTGACACTGAAGAATGGGTTCGACTGGCAGAAATGTCTCTGGAACAGGACAATATTAAGCAGGCTATCTTCTGCTATACAAAAGCTCTTAAATACGAACCTACTAATATCCGTTTTCTGTGGGAGCGATCAAGTCTGTGTGAACAGATGGGTGACCATAAAATGGCAATGGACGGGTACAGGCGAATTCTGAACCTTTTGCCTGCGTCTGATGGAGAGCGCTTTATGCAGTTGGCTAGAGATATGGCCAAGAGTTACTATGAAGCCAGTGACAGCGCCTCAGCTATTAACATAATCGAAGAAGCCTTCTCCAAACACCAGGCCCTGGTCTCCATGGAGGACGTCAATATCGCGGCCGAGCTGTACATTTCTAACAAGCAGTATGACAGAGCTTTGGAGGTAATTACGGATTTTTCTGGAATTGTGCTAGAAAAACAAACTTTGGAAGAAGACGGCCCCTCTGAGGAGAATAAAGCCTGCGATGGCATCACCTGTGCGGTCCCTGAGGGCGTGCCCATCGACATCATGGTGAAGCTGATGGTCTGCCTCGTGCATCTCCACATCCTCGAGCCGCTGAACCCTCTCCTGACGACACTGGTGGAGCAGAACCCCGAGGACATGGGCGACCTCTACCTGGATGTGGCGGAGGCGCTTCTGGACATTGGGGAGTACAGCTCTGCGCTGCCGCTCCTCAGTGCGCTGGTTTGCTCGGAGAGATACAGCCTCGCAGTGGTCTGGCTCCGCCATGCAGAGTGCCTGAAGGCCTTGGGCTACATGGAGCGTGCTGCTGAGAGCTACAGCAAGGTGGTGGATCTGGCCCCGCTCCACTTGGATGCCAGGATTTCCCTTTCCACCCTTCAGCAGCAGCTGGGCCGTCCCGAGAAGGCGCTGGAAGCTCTGGAACCGATGTATGACCCAGACACGTTAGCCCAGGATGCAAATGCCGCACAGCAGGAGCTGAAGCTGCTGCTGCACCGCTCCACGCTGCTGTTCTCGCAAGGCAAGATGCGCGGTTACGTGGACACCCTGCTCACCATGCTGGCCATGCTCCTGAAGGTAGCTATGAACAGAGCCCAGGTCTGCTTGATATCCAGCTCCAAATCTGGAGAGAGACATCTGTACCTTATGAAAGTATCGCGAGACAAAATATCAGACAGCAATGACCAAGAGTCGGCAAATTGTGACGCAAAAGCAATATTTGCTGTGCTCACGAGTGTCCTGCCTAAGGATGACTGGTGGAACCTTCTGCTGAAGGCCATCTACTCCTTATGTGACCTGTCCCGCTTTGAAGAGGCTGAGCTGCTGGCAGATTCTTCATTGGAATATTACTCGTTTTATGATGACAGGCAAAAGCGCAAAGAACTAGAGTACTTTGGTCTGTCAGCTGCAATTCTGGACAAAAATTTCAGAAAGGCATACAACTACATCAGGATAATGGTAATGGAAAATGTCAATAAACCCCAGCTCTGGAATATTTTCAACCAAGTCACCATGCATTCCCAAGATGTACGACATCATCGCTTCTGTCTCCGCCTCATGCTGAAAAACCCAGATAACCATGCCCTGTGTGTTTTGAATGGACACAATGCGTTCGTGTCTGGCAGTTTTAAGCACGCGCTTGCACAGTACATTCAGGCCTTTCGCGCCCGCCGTGATGAACCTCTCTACAACATGTGTATAGGCCTGACTTTTATTCACATGGCATCCCAGAAGTACGTGTTAAAGAGACATGCTCTCATTGTGCAGGGCTTCGCCTTCCTTAATCGATACCTCAGCCTGCGTGGTCGGTGCCAGGAGTCTCTGTACAATTTGGGCCGAGCCCTTCACCAGCTGGGGCTGACTCACCTCGCCATCCACTATTACCAGGAGGCGCTGGAGCTCCCCCCATTGGAGGCAGAGGGGATAGAGGCTGAGCAGGTGGACTTGCGAAGAGACATTGCCTACAACCTGGCCCTCATTTACCAGAGCAGCGGGAACTTGCTCATGGCCCGGTACCTCCTGTTCACCTACTGCACCATATGA

Related Sequences

XP_004868994.1 Protein

Gtf3c3 PREDICTED: general transcription factor 3C polypeptide 3 [Heterocephalus glaber]

Length: 884 aa      View alignments
>XP_004868994.1
MSGFSPELIDYLEGKISFEEFERRREERKTREKKSLQEEGKLSAEENADDSEAPSSSGINSSKSHVRDVSEGETSDGVSKSVQKVFDSMLGETEDDEEEEEEEEEGEEMLEQPTAGEVFALELVLNRETKKMMKEKRPRSKLPRALRGLMGEANIRFARGKREEAILMCMEIIRQAPLAYEPFSTLAMIYEDQGDMEKSLQFELIAAHLNPSDTEEWVRLAEMSLEQDNIKQAIFCYTKALKYEPTNIRFLWERSSLCEQMGDHKMAMDGYRRILNLLPASDGERFMQLARDMAKSYYEASDSASAINIIEEAFSKHQALVSMEDVNIAAELYISNKQYDRALEVITDFSGIVLEKQTLEEDGPSEENKACDGITCAVPEGVPIDIMVKLMVCLVHLHILEPLNPLLTTLVEQNPEDMGDLYLDVAEALLDIGEYSSALPLLSALVCSERYSLAVVWLRHAECLKALGYMERAAESYSKVVDLAPLHLDARISLSTLQQQLGRPEKALEALEPMYDPDTLAQDANAAQQELKLLLHRSTLLFSQGKMRGYVDTLLTMLAMLLKVAMNRAQVCLISSSKSGERHLYLMKVSRDKISDSNDQESANCDAKAIFAVLTSVLPKDDWWNLLLKAIYSLCDLSRFEEAELLADSSLEYYSFYDDRQKRKELEYFGLSAAILDKNFRKAYNYIRIMVMENVNKPQLWNIFNQVTMHSQDVRHHRFCLRLMLKNPDNHALCVLNGHNAFVSGSFKHALAQYIQAFRARRDEPLYNMCIGLTFIHMASQKYVLKRHALIVQGFAFLNRYLSLRGRCQESLYNLGRALHQLGLTHLAIHYYQEALELPPLEAEGIEAEQVDLRRDIAYNLALIYQSSGNLLMARYLLFTYCTI