Details from NCBI annotation

Gene Symbol Smad1
Gene Name SMAD family member 1, transcript variant X1
Entrez Gene ID 101725903

Database interlinks

Part of NW_004624853.1 (Scaffold)

For more information consult the page for NW_004624853.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMAD1 ENSCPOG00000009073 (Guinea pig)

Gene Details

SMAD family member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008146, Guinea pig)

Protein Percentage 99.14%
CDS Percentage 94.98%
Ka/Ks Ratio 0.01988 (Ka = 0.004, Ks = 0.202)

SMAD1 ENSG00000170365 (Human)

Gene Details

SMAD family member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000426568, Human)

Protein Percentage 99.35%
CDS Percentage 94.19%
Ka/Ks Ratio 0.01277 (Ka = 0.003, Ks = 0.2387)

Smad1 ENSMUSG00000031681 (Mouse)

Gene Details

SMAD family member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000071035, Mouse)

Protein Percentage 98.92%
CDS Percentage 88.39%
Ka/Ks Ratio 0.00747 (Ka = 0.005, Ks = 0.665)

Smad1 ENSRNOG00000018483 (Rat)

Gene Details

SMAD family member 1 (Smad1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025079, Rat)

Protein Percentage 98.28%
CDS Percentage 87.81%
Ka/Ks Ratio 0.01159 (Ka = 0.008, Ks = 0.6928)

Genome Location

Sequence Coding sequence

Length: 1398 bp    Location: 4444859..4502495   Strand: +
>XM_004868910.1
ATGAATGTGACAAGTTTATTTTCCTTCACAAGCCCAGCTGTGAAGAGACTTCTTGGGTGGAAACAGGGTGATGAAGAAGAAAAATGGGCAGAGAAAGCTGTTGATGCTTTGGTGAAAAAACTGAAGAAAAAGAAAGGTGCCATGGAGGAACTTGAAAAGGCTTTGAGCTGCCCAGGGCAACCAAGTAACTGTGTCACCATTCCCCGCTCGCTGGATGGCAGGCTGCAGGTGTCCCACCGGAAGGGACTGCCTCACGTCATTTACTGCCGTGTGTGGCGCTGGCCTGATCTTCAGAGCCACCATGAACTAAAACCACTGGAGTGCTGCGAATTTCCTTTTGGTTCCAAGCAGAAGGAGGTCTGCATCAACCCCTACCACTATAAGCGAGTAGAAAGCCCTGTTCTTCCTCCAGTGCTGGTTCCAAGACACAGCGAATATAATCCTCAGCACAGCCTCCTAGCTCAGTTCCGTACCTTGGGACAAAACGAGCCTCACATGCCACTCAACGCCACCTTTCCGGATTCTTTCCAGCAACCCAACAGCCACCCATTTCCCCATTCTCCCAACAGCAGTTACCCAAACTCTCCCGGAAGCAGCAGCAGCACCTACCCTCACTCTCCTACCAGCTCAGACCCAGGCAGCCCTTTCCAGATGCCAGCTGATACACCTCCACCTGCCTACCTGCCACCTGAAGACCCCATGACTCAGGATGGTTCTCAGCCAATGGACACAAATATGATGGCGCCTTCACTGCCCTCTGAAATCAGCAGAGGAGATGTTCAGGCAGTTGCTTATGAGGAACCAAAACATTGGTGTTCTATTGTCTACTATGAGCTCAATAACCGTGTGGGTGAAGCGTTCCATGCCTCCTCCACAAGCGTGTTGGTAGATGGCTTCACCGATCCTTCCAACAATAAGAACCGTTTCTGCCTTGGGCTGCTCTCCAATGTTAACCGGAATTCCACTATCGAAAACACCAGGCGGCACATTGGAAAAGGAGTTCATCTTTATTATGTTGGAGGGGAGGTATATGCCGAATGCCTCAGTGACAGTAGCATCTTTGTGCAGAGTCGGAACTGCAACTACCATCATGGATTTCATCCCACTACTGTTTGCAAAATCCCTAGTGGATGTAGTTTAAAAATTTTTAACAACCAAGAATTTGCTCAGTTATTGGCACAGTCTGTGAACCATGGTTTCGAAACAGTCTATGAGCTCACAAAAATGTGCACTATACGCATGAGTTTTGTGAAGGGCTGGGGAGCAGAATACCATCGCCAGGATGTTACGAGCACCCCCTGCTGGATTGAGATACACCTGCATGGCCCACTCCAGTGGCTGGATAAAGTTCTCACCCAGATGGGTTCACCTCACAATCCTATTTCATCAGTGTCTTAA

Related Sequences

XP_004868967.1 Protein

Smad1 PREDICTED: mothers against decapentaplegic homolog 1 isoform X1 [Heterocephalus glaber]

Length: 465 aa      View alignments
>XP_004868967.1
MNVTSLFSFTSPAVKRLLGWKQGDEEEKWAEKAVDALVKKLKKKKGAMEELEKALSCPGQPSNCVTIPRSLDGRLQVSHRKGLPHVIYCRVWRWPDLQSHHELKPLECCEFPFGSKQKEVCINPYHYKRVESPVLPPVLVPRHSEYNPQHSLLAQFRTLGQNEPHMPLNATFPDSFQQPNSHPFPHSPNSSYPNSPGSSSSTYPHSPTSSDPGSPFQMPADTPPPAYLPPEDPMTQDGSQPMDTNMMAPSLPSEISRGDVQAVAYEEPKHWCSIVYYELNNRVGEAFHASSTSVLVDGFTDPSNNKNRFCLGLLSNVNRNSTIENTRRHIGKGVHLYYVGGEVYAECLSDSSIFVQSRNCNYHHGFHPTTVCKIPSGCSLKIFNNQEFAQLLAQSVNHGFETVYELTKMCTIRMSFVKGWGAEYHRQDVTSTPCWIEIHLHGPLQWLDKVLTQMGSPHNPISSVS