Details from NCBI annotation

Gene Symbol Pof1b
Gene Name premature ovarian failure, 1B, transcript variant X1
Entrez Gene ID 101698475

Database interlinks

Part of NW_004624852.1 (Scaffold)

For more information consult the page for NW_004624852.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

POF1B ENSCPOG00000009472 (Guinea pig)

Gene Details

premature ovarian failure, 1B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008501, Guinea pig)

Protein Percentage 89.63%
CDS Percentage 92.57%
Ka/Ks Ratio 0.39821 (Ka = 0.0581, Ks = 0.1459)

POF1B ENSG00000124429 (Human)

Gene Details

premature ovarian failure, 1B

External Links

Gene Match (Ensembl Protein ID: ENSP00000262753, Human)

Protein Percentage 87.93%
CDS Percentage 89.0%
Ka/Ks Ratio 0.21791 (Ka = 0.0659, Ks = 0.3022)

Pof1b ENSMUSG00000034607 (Mouse)

Gene Details

premature ovarian failure 1B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047655, Mouse)

Protein Percentage 89.93%
CDS Percentage 88.23%
Ka/Ks Ratio 0.11135 (Ka = 0.0495, Ks = 0.4447)

Pof1b ENSRNOG00000004795 (Rat)

Gene Details

premature ovarian failure 1B (Pof1b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006415, Rat)

Protein Percentage 90.44%
CDS Percentage 88.4%
Ka/Ks Ratio 0.11172 (Ka = 0.0483, Ks = 0.4322)

Genome Location

Sequence Coding sequence

Length: 1770 bp    Location: 3022251..3133343   Strand: +
>XM_004868873.1
ATGATGAGCTCAAGCTATTGGAATGAAACCAGCAGTAGCTGTGGGACCCAACAGCCCTCTGAGGTGCTACAGTACCAGCCCCAGCATTACCATTGCCAGCATCAGTCAAGCCAAGTCCAACAGCCTCTAGAAAAAAATGTAGTCTATGAACGAGTGAGGACCTACAGTGGGCCCATGAACAAGGTAGTTCAAGCCTTGGACCCCATCGGTTCTCGGGAAGTGCTCTCCCCTCTCAAAACTGCCTCCTCCTACCAAAACTTGGTTTGGAGCAACCATTCCCAGGAACTCCATTCTCCAACTCTGAAAATATCAACTTGTGCCCCAAGCAATTTACATATAACGCAAAACACTGAACAGGAACTCCATTCTCCAACAGTGAAAGTCATTACATATCCACAAACCAATATTAGGAGATACATAGTACAAAATCCTGAGCAGGAACCACTGTCTCCATTCATGAGAGGAAACCATTTCTTCCCTGGAAACAATGTTATTTATGAAAAGACAATAAGAAAAGTGGAAAAGCTAAACACAGATCAAGAATGCTATCCTCAGGTTCAATGTCTTCATCACATTGTCCAACAGCCCCCAGTCACCCACTGTCCACATTGTCAACAATTCCATTCCAGCCAACAAATCAAAAGCATTACAGAAAATGATTCAACTTCTATAAACATTGGAAATGAACTTTGCCATGGTGGGTCAAGCCAGATACATGAGCAGGTTATAATGCAGGATGATGGCCCTGAGAAATTGGACCCCAAGTATTTTGGAGAGTTGCTTGCTGACCTATGTCGTAAGAATACTGATCTATATAACTGCTTATTAGAACATCTGCAGAGAATTGGAGGAAGCAAACAAGACTTTGAGTCTACTGATACATCAGAAGACATTGAGTCATTGATTCCTAAAGGATTGTCAGAATTTACAAAACAGCAAATTCGCTATATTCTACAGATGAGGGATATGTCTGATAAATCACTCCGGCTAATACTATCCACATTCAGTAACATAAGGGAGGAGCTTGGACATCTTCAAAATGACTTGACATCACTGGAAAATGACAAGATAAGACTTGAGAAGGACTTGGCATTCAAAGAATCTCAAATAAAAGGGTATGAAGAACTCTTGGCATCAGTGCGAGCAAATAATCGCCAGCAGCAACAAGGACTTCAAGACTCAGGCTCAAAATGCCAGGCATTAGAAGAAAATAATCTTTCTCTTCGACATACACTATCAGATATGGAGTACAGATTAAAAGAACTGGAGTATTGTAAATGTAATTTAGAACAAGAGAATAAAAATCTTAGATTACAGGTTTCTGAGACTTGCACAGGCCCAATGTTGCAGGTTAAAATGGATGAAATTGGCAACCATTACACAGAGATGGTAAAAAACTTGAGACTAGAGAAAGACAGAGAGATCTGCAAGCTAAGGTCCCAATTAAACCAGTACCAAAAAGATGTTTCAAGAAGAGAAGGAAGCTGTAATGACTTTCAGTTCAAGCTTCATGAACTGACAAGCTTGCTGGAAGAGAAGGATTCCCTCATAAAGCGTCAGTCAGAGGAACTCTCAAAGTTGAGACAAGAAATATACTCATCTCATAACCAACCCTCCAGTGGTGGAAGGACTACTATTACCACTAAAAAGTACAGGACACAGTATCCAATCCTAGGCCTCCTGTATGATGACTATGAATATATACCACCAGGTACTGACACACAGACAATTGTGATTGAGAAAACAGAAGACAAATGGACTTGTCCATGA

Related Sequences

XP_004868930.1 Protein

Pof1b PREDICTED: protein POF1B isoform X1 [Heterocephalus glaber]

Length: 589 aa      View alignments
>XP_004868930.1
MMSSSYWNETSSSCGTQQPSEVLQYQPQHYHCQHQSSQVQQPLEKNVVYERVRTYSGPMNKVVQALDPIGSREVLSPLKTASSYQNLVWSNHSQELHSPTLKISTCAPSNLHITQNTEQELHSPTVKVITYPQTNIRRYIVQNPEQEPLSPFMRGNHFFPGNNVIYEKTIRKVEKLNTDQECYPQVQCLHHIVQQPPVTHCPHCQQFHSSQQIKSITENDSTSINIGNELCHGGSSQIHEQVIMQDDGPEKLDPKYFGELLADLCRKNTDLYNCLLEHLQRIGGSKQDFESTDTSEDIESLIPKGLSEFTKQQIRYILQMRDMSDKSLRLILSTFSNIREELGHLQNDLTSLENDKIRLEKDLAFKESQIKGYEELLASVRANNRQQQQGLQDSGSKCQALEENNLSLRHTLSDMEYRLKELEYCKCNLEQENKNLRLQVSETCTGPMLQVKMDEIGNHYTEMVKNLRLEKDREICKLRSQLNQYQKDVSRREGSCNDFQFKLHELTSLLEEKDSLIKRQSEELSKLRQEIYSSHNQPSSGGRTTITTKKYRTQYPILGLLYDDYEYIPPGTDTQTIVIEKTEDKWTCP