Details from NCBI annotation

Gene Symbol Pdcd2
Gene Name programmed cell death 2, transcript variant X4
Entrez Gene ID 101701624

Database interlinks

Part of NW_004624850.1 (Scaffold)

For more information consult the page for NW_004624850.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PDCD2 ENSCPOG00000002920 (Guinea pig)

Gene Details

programmed cell death 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002652, Guinea pig)

Protein Percentage 20.31%
CDS Percentage 33.59%
Ka/Ks Ratio 0.17501 (Ka = 1.4358, Ks = 8.2041)

PDCD2 ENSG00000071994 (Human)

Gene Details

programmed cell death 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000439467, Human)

Protein Percentage 79.65%
CDS Percentage 85.99%
Ka/Ks Ratio 0.39716 (Ka = 0.116, Ks = 0.2921)

Pdcd2 ENSMUSG00000014771 (Mouse)

Gene Details

programmed cell death 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000052523, Mouse)

Protein Percentage 79.11%
CDS Percentage 79.41%
Ka/Ks Ratio 0.15723 (Ka = 0.1217, Ks = 0.7743)

Pdcd2 ENSRNOG00000001490 (Rat)

Gene Details

programmed cell death 2 (Pdcd2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002040, Rat)

Protein Percentage 78.67%
CDS Percentage 78.81%
Ka/Ks Ratio 0.15511 (Ka = 0.1256, Ks = 0.8095)

Genome Location

Sequence Coding sequence

Length: 681 bp    Location: 6383800..6378837   Strand: -
>XM_004868858.1
ATGGCAGCCGCGGTACCCGCGTCTGTGGAGCTAGGCTTTGCCGAGGAGGCTCCGGCATGGCGGCTGCGCAGCGAGCAGTTCCCCAGCAAGGTGGGCGGGCGTCCGGCGTGGCTGAGCGCGACCGCGCTGCCGGAGCCCGGGGCCCTGACGTGCCCGCGCTGCGGCCGACCCCTCGCCTTCCTGCTGCAGGTGTACGCGCCATTGCCCGGCCGCGCCGACGCCTTCCACCGCAGCCTCTTCCTTTTCTGCTGCCGTGAGCCGCCGTGCTGTGCGGGCCTCCGAGTTTTTAGGAATCAGCTACCCAGGAAAAATGAGTTTTACTCATTTGAGCCACCTTCTGAGCACCCTCCCCCAGAAGCAGGAGAATCTGTGTGTCTCCAACTTCAGTCTGGCACTCACCTCTGCAGGGTTTGTGGCTGTTTAGCCCCCAAAACATGCTCCAGATGCCACCAGGCACATTACTGCAGTAAGGAGCATCAGACCCTAGACTGGAGGTTGGTACATAAGCAGACTTGCACACAAGCTCAGTTGAACCATCCAGTTCCAGACCACAACTTCCTTTTTCCAGAATTTGAAATTGTAATAGAAACAGAAGATGAGACTGTGCCTGAAGTTGTAGAAAAGGAAGATGACACTGAGATTATAGAAAGCATGGATTCTCAGATATGGCAGAGGTATTGA

Related Sequences

XP_004868915.1 Protein

Pdcd2 PREDICTED: programmed cell death protein 2 isoform X4 [Heterocephalus glaber]

Length: 226 aa      View alignments
>XP_004868915.1
MAAAVPASVELGFAEEAPAWRLRSEQFPSKVGGRPAWLSATALPEPGALTCPRCGRPLAFLLQVYAPLPGRADAFHRSLFLFCCREPPCCAGLRVFRNQLPRKNEFYSFEPPSEHPPPEAGESVCLQLQSGTHLCRVCGCLAPKTCSRCHQAHYCSKEHQTLDWRLVHKQTCTQAQLNHPVPDHNFLFPEFEIVIETEDETVPEVVEKEDDTEIIESMDSQIWQRY