Details from NCBI annotation

Gene Symbol Top3a
Gene Name topoisomerase (DNA) III alpha
Entrez Gene ID 101706019

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TOP3A ENSCPOG00000009392 (Guinea pig)

Gene Details

topoisomerase (DNA) III alpha

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008433, Guinea pig)

Protein Percentage 87.32%
CDS Percentage 88.16%
Ka/Ks Ratio 0.28149 (Ka = 0.0824, Ks = 0.2927)

TOP3A ENSG00000177302 (Human)

Gene Details

topoisomerase (DNA) III alpha

External Links

Gene Match (Ensembl Protein ID: ENSP00000321636, Human)

Protein Percentage 82.82%
CDS Percentage 83.22%
Ka/Ks Ratio 0.21413 (Ka = 0.1101, Ks = 0.5143)

Top3a ENSMUSG00000002814 (Mouse)

Gene Details

topoisomerase (DNA) III alpha

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002891, Mouse)

Protein Percentage 81.51%
CDS Percentage 80.45%
Ka/Ks Ratio 0.1684 (Ka = 0.1176, Ks = 0.6985)

Top3a ENSRNOG00000005099 (Rat)

Gene Details

topoisomerase (DNA) III alpha

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061212, Rat)

Protein Percentage 76.48%
CDS Percentage 78.23%
Ka/Ks Ratio 0.23478 (Ka = 0.1601, Ks = 0.6817)

Genome Location

Sequence Coding sequence

Length: 2748 bp    Location: 3159353..3196253   Strand: +
>XM_004868798.1
ATGATCTTTTCGGTCGTCCATTACCCGCTCCGGTGGCTTCGACGGCCCGGAGGCCGTGCCTTGACCCTCGCCGCCATGGAAGTGGCCTTCCGAGGCGTGCGGAAAGTCCTCTGTGTGGCCGAGAAAAACGACGCAGCCAAGGGAATCGCTGATCTGCTGTCCAACGGTCGCATGAGACGGGAGCTGGAGAAACTGGCTTCTCGAAAGTTGAGAATAAATGCTAAAGAAACTATGAGAATTGCTGAAAAGCTCTACACTCAAGGTGTGATTGACTTTGACCTCAGTGACCCTTTGTGTTCTGCAGTGAAGCCCAGTCTGCAGGTGTTAAGAGCCCGTTTCTCTGAGATCACCCCCGGTGCTGTCAGGACAGCCTGTGAAAACCTGACTGAGCCAGATCAGAGAGTGAGTGATGCTGTGGATGTGAGGCAGGAGCTGGACCTGAGGATCGGAGCTGCCTTCACTCGGTTCCAGACCCTGCGGCTCCAGAAGGTTTTTCCTGAAGTGCTGGCCGAGCAGCTCATCAGCTATGGCAGCTGCCAGTTTCCCACATTGGGCTTTGTGGTGGAAAGATTCAAAGCCATTCAGGCCTTTGTGCCAGAAATCTTCCACAGAATCAAAGTAACTCATGACCACGAAGATGGTGCTGTAGATTTCAATTGGAAAAGGCATCGTCTGTTTAACCATACAGCTTGTCTTGTCCTCTATCAGTTGTGTATGGAGGATCCCATGGCAACTGTAGTGGAGGTCAGGTCAAAGCCAAAGAGCAAGTGGAGGCCTCAAGCCTTGGACACTGTGGTATGTTCTAGACAGACTGTTCCAGTGCTAAAGAACAATTACTTCCTATTGTACATCAGCTATCCCCGAACAGAGACAAACATTTTCCCCAGAGACTTAAACTTGATGGCATTGGTGGAACAGCAAACGCAGGATCCAGACTGGGGGGCCTTTGCCCAGAGTATTTTAGAACGGGGTGGCCCTACCCCACGCAATGGAAATAAGTCTGACCAAGCTCACCCTCCAATTCACCCCACTAAGTATACCAGTAACTTGCAGGGAGATGAACAGCGACTGTATGAGTTGATTGTTCGTCATTTCCTGGCTTGCTGCTCCCAAGATGCCCAAGGACAGGAAACAACTGTGGAGATTGACATTGCTCAGGAACGCTTTGTGGCCCGTGGCCTCATGATTCTAGCCCGAAACTACCTGGATGTGTATCCATATGATCGCTGGAGTGACAAGCTCCTCCCTGTCTATGAGGAAGGCTCCCAGTTTCAGCCCAGCACAATAGAGATGCTAGATGGGGAGACCAGCCCTCCACAGCTGCTCACTGAGGCTGACCTCATCGCCCTCATGGAGAAACACGGCATTGGTACTGATGCCACTCATGCGGAGCACATTGAGACCATCAAAGCCCGGATGTATGTTGGGCTCACTTCCGACAAGCGGTTCCTCCCTGGGCACCTGGGCATGGGACTAGTGGAAGGTTATGATTCCATGGGCTATGAGATGTCTAAGCCTGACCTCCGGGCTGAGCTGGAAGCTGATCTGAAACTGATCTGTGAAGGCAAGAAGGACAAGTCTGTAGTTCTGAGGCAGCAGGTGCAGAAATATAAACAGGTTTTCATTGAAGCAGTGGCTAAGGCAAAGAAGTTGGACGAGGCCTTGTCTCAGTACTTTGGAGAAGGGACAGAGACGCCCCAGCAAGAAGAGATCTACCCAGCCATGCCAGAGCCCATCCGGAAGTGCCCACAGTGCAACAAAGACATAGTCCTAAAGACCAAGAAGAGTGGTGGTTTCTACCTTGGCTGTACAAGTTTCCCAGAATGCCGACTGGCCATGTGGTTTCCCGACTCAGTGCTGGAGGTCAGCAGGGATGAGAGTGTGTGTCCAGTTTGTCAACCGGCCCCTGTGTACAGGTTGAAGTTCAAATTCAAGCGTGGGAGCCTTCCCCCAACCATCCCCCTGGAGTTTGTGGGCTGCATCGGTGGATGTGATGAGACCCTGAATGAGATCCTGGGCGTGCAATTTTCACGGGGTCCTCCCAGAAGCAGCCAGCCCTCTGGCCACCTGCAGGCTAGCCAGTCAATGAACAGGATGGACAGCAGCCACTCCCAGCCTCCTGACAGTAGACAGACCAGACCCTCACAGGCTCAGGCCCAGGCCCTCCTGCCTGCTGCTGCCACTGGTGAGAGCAACGCTGTGACTTGCAACTGTGGCCAGGAGGCTGTGCTGCTCACCGTCCGAAAAGAGGGCCCCAACCAGGGTCGGCAGTTCTACAAGTGCAACAGTGGTGGCTGCAACTTCTTCCTCTGGGCCGATGGTGGCCATCCTGGAGCAGGAGGAGCCCCTGCCTCTGCAACAAGACCCCCAGGCAGCTCACTTGGACACCCACCAGGCTCAGGGCACCACTTTGGTGGCTTCAGCAACCCTGATGATGGCAGTGGTGGCAGCACATCCTGCTTGTGTAGTCAACCTGCTGTCATGAGAACAGTGCAGAAGGAGGGTCCCAACAAAGGCCGCCAGTTCCACACGTGTGCAAAGCCACGGGAGCAGCAGTGTGGCTTCTTTCAGTGGGCCGATGAGAACGTGGCCCCAGGAACTTTTGCAGCCCAACCTTGGCCAGGAGGCAGGAGCAAAAGGCCCCGGACCAGTTCCTCAGATGCAGGGTCCACAGCAAAGAAATCTCGTAAATGCAGTCTTTGCCACCAGCCTGGACACACCCGGCCCTTCTGTCCTCAGAATAGATGA

Related Sequences

XP_004868855.1 Protein

Top3a PREDICTED: DNA topoisomerase 3-alpha [Heterocephalus glaber]

Length: 915 aa      View alignments
>XP_004868855.1
MIFSVVHYPLRWLRRPGGRALTLAAMEVAFRGVRKVLCVAEKNDAAKGIADLLSNGRMRRELEKLASRKLRINAKETMRIAEKLYTQGVIDFDLSDPLCSAVKPSLQVLRARFSEITPGAVRTACENLTEPDQRVSDAVDVRQELDLRIGAAFTRFQTLRLQKVFPEVLAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIKVTHDHEDGAVDFNWKRHRLFNHTACLVLYQLCMEDPMATVVEVRSKPKSKWRPQALDTVVCSRQTVPVLKNNYFLLYISYPRTETNIFPRDLNLMALVEQQTQDPDWGAFAQSILERGGPTPRNGNKSDQAHPPIHPTKYTSNLQGDEQRLYELIVRHFLACCSQDAQGQETTVEIDIAQERFVARGLMILARNYLDVYPYDRWSDKLLPVYEEGSQFQPSTIEMLDGETSPPQLLTEADLIALMEKHGIGTDATHAEHIETIKARMYVGLTSDKRFLPGHLGMGLVEGYDSMGYEMSKPDLRAELEADLKLICEGKKDKSVVLRQQVQKYKQVFIEAVAKAKKLDEALSQYFGEGTETPQQEEIYPAMPEPIRKCPQCNKDIVLKTKKSGGFYLGCTSFPECRLAMWFPDSVLEVSRDESVCPVCQPAPVYRLKFKFKRGSLPPTIPLEFVGCIGGCDETLNEILGVQFSRGPPRSSQPSGHLQASQSMNRMDSSHSQPPDSRQTRPSQAQAQALLPAAATGESNAVTCNCGQEAVLLTVRKEGPNQGRQFYKCNSGGCNFFLWADGGHPGAGGAPASATRPPGSSLGHPPGSGHHFGGFSNPDDGSGGSTSCLCSQPAVMRTVQKEGPNKGRQFHTCAKPREQQCGFFQWADENVAPGTFAAQPWPGGRSKRPRTSSSDAGSTAKKSRKCSLCHQPGHTRPFCPQNR