Details from NCBI annotation

Gene Symbol Slc47a1
Gene Name solute carrier family 47, member 1, transcript variant X3
Entrez Gene ID 101698224

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SLC47A1 ENSCPOG00000011224 (Guinea pig)

Gene Details

solute carrier family 47 (multidrug and toxin extrusion), member 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010092, Guinea pig)

Protein Percentage 91.93%
CDS Percentage 91.27%
Ka/Ks Ratio 0.18664 (Ka = 0.0435, Ks = 0.2332)

SLC47A1 ENSG00000142494 (Human)

Gene Details

solute carrier family 47 (multidrug and toxin extrusion), member 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000270570, Human)

Protein Percentage 82.49%
CDS Percentage 84.12%
Ka/Ks Ratio 0.27064 (Ka = 0.112, Ks = 0.414)

Slc47a1 ENSMUSG00000010122 (Mouse)

Gene Details

solute carrier family 47, member 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000010267, Mouse)

Protein Percentage 83.15%
CDS Percentage 82.31%
Ka/Ks Ratio 0.15971 (Ka = 0.0988, Ks = 0.6187)

Slc47a1 ENSRNOG00000002355 (Rat)

Gene Details

solute carrier family 47 (multidrug and toxin extrusion), member 1 (Slc47a1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000054704, Rat)

Protein Percentage 81.85%
CDS Percentage 82.03%
Ka/Ks Ratio 0.17515 (Ka = 0.1057, Ks = 0.6035)

Genome Location

Sequence Coding sequence

Length: 1665 bp    Location: 5776044..5831966   Strand: +
>XM_004868788.1
ATGGAGGCTCCCTTGGAGTCTGGGCCCGGGCCCGAAGGCACCCCGGCCACCTCCGAGCGGCGGGGGCTGCGCTGCCCCCTGCTGCCTGATTTCCGAGAGGAGCTGCGGGCTCTCCTGGTCCTGGCTGGTCCCGCGTTCCTGGCCCAGCTGATGATATTCCTGATCAGTTTCATCAGCTCTGTGTTCTGTGGCCACCTGGGCAAGCTGGAACTGGACGCTGTCACACTCGCAATTGCAATTATCAATGTCACTGGCATTTCTGTGGGACATGGCTTGTCTTCTGCTTGTGACACCCTCATCTCCCAGACTTACGGGAGCCAGAACCTGAAGCACGTGGGGGTGATCCTGCAGAGGGGCACACTCATTCTGCTGCTCTGCTGCTTTCCTTGCTGGGCGCTCTTCCTCAACACCCAGCACATCTTGCTGCTCTTCAGGCAGGATCCAGACGTGTCCAGGCTTACCCAGACCTATGTCATGATCTTCATTCCAGCTCTTCCTGGAATTGTTCTGCCCCAGATTGTGACTGGAGTTGCAGCCAACCTTGTCAATGCCTTTGCCAACTATATATTTCTCTATCAGCTGCACCTTGGAGTGACGGGTTCTGCACTGGCCAATACCATTTCCCAGTTCACCCTAGCTCTTCTCCTCTTTCTCTACATCTTTGGGAGAAAATTGCATGAAGCTACGTGGGGAGGCTGGTCGCTTGAGTGCCTGCAGGACTGGGCCTCTTTCCTTCACCTGGCCATCCCCAGCATGTTCATGCTGTGCATCGAGTGGTGGGCCTACGAGATCGGGAGCTTCCTGAGTGGTATCCTTGGCATGGTGGAACTGGGAGCCCAGTCCATTGTATACGAGCTGGCTGTCATTGTGTACATGGTCCCTACAGGCTTCAGTGTGGCAGCCAGCGTCCGGGTAGGAAATGCGTTGGGTGCTGGAAACATTGAACAGGCAAAGAAGTCCTCAGTCGTCTCCCTGTTGGTCACAGAGCTCTTCGCGGTAACCTTTTGTGTCCTGCTGTTAAGCTGTAAGGACCTTTTGGGGTACATTTTCACTACTGACAGAGACATCATTGCTCTGGTGGCTCAGGTGGTCCCAATTTATGCTGTGACCCACCTCTTTGAAGGTCTTGCTTGTACAAGTGGTGGCATCCTGAGGGGAACTGGAAACCAGAAGGTTGGAGCCATTGTTAATACCATTGGGTATTATGTGATTGGTCTTCCCATTGGGATTGCGCTGATGTTTGCAGCTGAGCTTGGAGTTATTGGTCTGTGGTCAGGGATCATCATCTGTGCTGTCTCTCAAGCTGTGTGTTTTCTGGTCTTCATTGCTCAGCTTAACTGGAAACAAGCCTGCCAGCAGGCTCAAGTACATGCCAACTTGAAGGTAAATGTGGCCCTGAGTGGGAATTCTACTGCCTCTCAGGATCCAGTTTTCTCAGTGAGTCCTGAAAACCATGAAGAGATTTTAATGAGAGATATTGAAAAAAAAGAGGAGACTCACTCGGAACAACAGATACACCAAGAACAACCTTTGCCTGCCCATACAAAAGACAATGGCAAATTGTCTGGAAAACAGTTGGTGCTACGGCGAGGGCTCCTGCTCCTTGGGGTCCTTTTAGTCTTGCTCATAGGGATTTTAGTGAGAATATATGTCAGAATTCAGTGA

Related Sequences

XP_004868845.1 Protein

Slc47a1 PREDICTED: multidrug and toxin extrusion protein 1 isoform X3 [Heterocephalus glaber]

Length: 554 aa      View alignments
>XP_004868845.1
MEAPLESGPGPEGTPATSERRGLRCPLLPDFREELRALLVLAGPAFLAQLMIFLISFISSVFCGHLGKLELDAVTLAIAIINVTGISVGHGLSSACDTLISQTYGSQNLKHVGVILQRGTLILLLCCFPCWALFLNTQHILLLFRQDPDVSRLTQTYVMIFIPALPGIVLPQIVTGVAANLVNAFANYIFLYQLHLGVTGSALANTISQFTLALLLFLYIFGRKLHEATWGGWSLECLQDWASFLHLAIPSMFMLCIEWWAYEIGSFLSGILGMVELGAQSIVYELAVIVYMVPTGFSVAASVRVGNALGAGNIEQAKKSSVVSLLVTELFAVTFCVLLLSCKDLLGYIFTTDRDIIALVAQVVPIYAVTHLFEGLACTSGGILRGTGNQKVGAIVNTIGYYVIGLPIGIALMFAAELGVIGLWSGIIICAVSQAVCFLVFIAQLNWKQACQQAQVHANLKVNVALSGNSTASQDPVFSVSPENHEEILMRDIEKKEETHSEQQIHQEQPLPAHTKDNGKLSGKQLVLRRGLLLLGVLLVLLIGILVRIYVRIQ