Sequence details NCBI ID: XM_004868721.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Nt5m
Gene Name 5',3'-nucleotidase, mitochondrial, transcript variant X1
Entrez Gene ID 101708532

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

NT5M ENSCPOG00000022552 (Guinea pig)

Gene Details

5',3'-nucleotidase, mitochondrial

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000015530, Guinea pig)

Protein Percentage 87.1%
CDS Percentage 86.79%
Ka/Ks Ratio 0.14849 (Ka = 0.0771, Ks = 0.5194)

NT5M ENSG00000205309 (Human)

Gene Details

5',3'-nucleotidase, mitochondrial

External Links

Gene Match (Ensembl Protein ID: ENSP00000373674, Human)

Protein Percentage 87.56%
CDS Percentage 89.04%
Ka/Ks Ratio 0.13115 (Ka = 0.0618, Ks = 0.471)

Nt5m ENSMUSG00000032615 (Mouse)

Gene Details

5',3'-nucleotidase, mitochondrial

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099756, Mouse)

Protein Percentage 89.09%
CDS Percentage 85.61%
Ka/Ks Ratio 0.08444 (Ka = 0.0659, Ks = 0.7803)

Nt5m ENSRNOG00000003332 (Rat)

Gene Details

5',3'-nucleotidase, mitochondrial (Nt5m), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000004448, Rat)

Protein Percentage 77.99%
CDS Percentage 77.19%
Ka/Ks Ratio 0.1274 (Ka = 0.1492, Ks = 1.1712)

Genome Location

Sequence Coding sequence

Length: 708 bp    Location: 4098149..4051342   Strand: -
Raw sequence   
>XM_004868721.1
ATGATCCGGCTGGGCGGCTGGTGCGCGCGGCGCCCCCGTGGCGCGGCGGGCCCGGCGGAGAGGCGCGGAGTGTCGGGGGGGCCGGGCAGCCGCGCCCTGCGGGTGCTGGTGGACATGGACGGCGTGCTGGCCGACTTCGAGGGCGGTTTCCTCAAGAAGTTCCGCGCGCGCTTCCCCGACCTGCCCTTCGTCGCGCTGGAGGACCGGCGCGGCTTCTGGGTGTCGGAGCAGTACGGTCGCTTGCGGCCCGGGCTGAGCGAGAAGGCCATTAGCATCTGGGAGTCCAAGAATTTCTTCTTTGAACTTGAGCCTTTGCCAGGGGCTGTGGAAGCTGTGAAGCAGATGGCCAACCTACAGAACACTGACGTGTTCATCTGCACAAGTCCCATCAAGATGTTCAAGTACTGTCCCTATGAGAAGTATGCCTGGGTGGAGAAGCACTTTGGTCCTGACTTTTTGGAGCAGATCGTGCTGACCAGAGACAAGACCATAATCTCTGCTGACCTCCTCATAGACGACCGGCTGGACATTATAGGGGCTGAGCCACACCCCAGCTGGGAGCACGTCCTCTTCACATCTTGTCACAACCAGCACGTGTGGCTGCCTCCTTCCCGCCACCGGCTGCACTCATGGGCGGATGACTGGAAGGCCATTCTGGACAGCAAGCGGGCCATTGTTGACTGCTGCACTGAGACTCTCCTTGACTGA

Related Sequences

XP_004868778.1 Protein

Nt5m PREDICTED: 5'(3')-deoxyribonucleotidase, mitochondrial isoform X1 [Heterocephalus glaber]

Length: 235 aa      View alignments
>XP_004868778.1
MIRLGGWCARRPRGAAGPAERRGVSGGPGSRALRVLVDMDGVLADFEGGFLKKFRARFPDLPFVALEDRRGFWVSEQYGRLRPGLSEKAISIWESKNFFFELEPLPGAVEAVKQMANLQNTDVFICTSPIKMFKYCPYEKYAWVEKHFGPDFLEQIVLTRDKTIISADLLIDDRLDIIGAEPHPSWEHVLFTSCHNQHVWLPPSRHRLHSWADDWKAILDSKRAIVDCCTETLLD