Details from NCBI annotation

Gene Symbol Srebf1
Gene Name sterol regulatory element binding transcription factor 1, transcript variant X2
Entrez Gene ID 101705277

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SREBF1 ENSCPOG00000002439 (Guinea pig)

Gene Details

sterol regulatory element binding transcription factor 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002221, Guinea pig)

Protein Percentage 92.36%
CDS Percentage 91.69%
Ka/Ks Ratio 0.18497 (Ka = 0.0423, Ks = 0.2287)

SREBF1 ENSG00000072310 (Human)

Gene Details

sterol regulatory element binding transcription factor 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000348069, Human)

Protein Percentage 86.65%
CDS Percentage 85.99%
Ka/Ks Ratio 0.14869 (Ka = 0.0731, Ks = 0.4917)

Srebf1 ENSMUSG00000020538 (Mouse)

Gene Details

sterol regulatory element binding transcription factor 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000020846, Mouse)

Protein Percentage 82.11%
CDS Percentage 80.73%
Ka/Ks Ratio 0.16203 (Ka = 0.1124, Ks = 0.6935)

Srebf1 ENSRNOG00000003463 (Rat)

Gene Details

sterol regulatory element binding transcription factor 1 (Srebf1), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000050057, Rat)

Protein Percentage 81.41%
CDS Percentage 80.57%
Ka/Ks Ratio 0.17467 (Ka = 0.1175, Ks = 0.6728)

Genome Location

Sequence Coding sequence

Length: 3390 bp    Location: 3612943..3623922   Strand: +
>XM_004868712.1
ATGGATTGCACATTTGAAGACATGCTTCAGCTCATCAACAACCAAAACAGCGACTTCCCTGGCCTATTTGATCCACCTTATGCTGGGGCTGGGGCAGGAGACACAGATCCAGCCAGCCCTGGTGCCTGCTCCCCAAGCAGCTTGTCTCCACCTCTGTCACTGAGCTCCCCTCTGGAAGCACTCCTGGGGGGGTCCAAGGCAACACCCCCACCTTCATCCCCTCCCCAGTCTGTACTCACCCCACTGAAGATGTTCTCTTCTGTGTCCCCCTTCTCCCCTGGGCATGGTATCAAAGAAGAGCTGGTGCCACTCACCATCCTGCAGCCCCCTACCCTGCCATCTCCAGCCCGGCAGCCTCCCATCCCTCAGCCCCTACCGCCCCTCCTGCCTCAGAGCTTTCCAGCCCCAGCCCCTCCACAGTTCAACTCCACCCCTGTTTTGGGTTATTCCAGCTCTCCCGGAGGCTTTGTGGCAGAAACCCCTTCCGGGAGCGCCCAGCCGCCACTGCTTGGCCTGCCATTGGCTTCCCCGACAGGAGTCATACCCACCTCCTTTCATGCCCCGGTCCAGAGTATGGCCCCCCAGCAGCTTCTGACAGCCACAGCAGCCCCTGGAACAACCACCGTGACCTCACAGATCCAGCAGGTCCCGGTCCTGCTGCAGCCACACTTCATCAAGGCAGACTCATTGCTCCTGACGACCATGAAGACAGATGTGGGGGCCACTGTGAAGGCAACGGGTATTAGCTCCCTGGCCCCTGGCACAGCTGTGCAGACAGGGCCCTTGCAGACTCTGGTGAGTGGTGGGACCATCCTGGCCACGGTGCCACTGGTCGTGGATGCTGACAAATTGCCCATCAACCGGCTTGCAGCTGGCAGCAAAGCCCCAGGCTCCGCCCAGAGCCGTGGGGAGAAGCGCACAGCCCATAATGCCATCGAGAAGCGCTACCGCTCCTCCATCAACGACAAGATCGTGGAGCTCAAGGATCTGGTGGTGGGCACGGAGGCAAAGCTGAATAAATCTGCTGTCTTGCGCAAGGCCATCGATTACATCCGTTTCTTACAACACAGCAACCAGAAACTCAAGCAGGAGAACCTGAGTCTTCGAAGTGCTGTCCACAAAAGCAAATCACTGAAGGATCTGGTGTCAGACTGTGGCAGTGGAGAAAATGCAGATGTGGCCATGGAGGGTGTGAAGTCTGAGGTGGTAGACACGCTGACTCCACCACCCTCGGATGCCGGCTCGCCCTCCCAGAGCAGCCCTTTGTCCCTCAGCAGCAGGAGTAGTGGTAGTGGTGGCAGCGGCAGTGACTCGGAGCCTGACAGTCCAGTCATCGAGGACAGCCAGGTAAAGCCAGAGCAGCTGCCGTCTCCCCATAGCCGGGGCATGCTGGACCGCTCCCGCCTGGCCTTGTGTGCACTGGTTTTCCTCTGTGTGTTCTACAACCCCTTGGCTTCCCTGCTGAGTGGCCGGGGGCTTCCCAGCCCCCTGGATGCCACCAGTGTCCACCACAGTCCTGGGCGTGCCATGCTGGGTGCCGAGGGCAGAGATGGCCCTGGCTGGGCTCAGTGGCTGCTGCCCCCTCTGGTCTGGCTGGGCAATGGGTTGCTGGTGCTGCTCTCCCTGGCATTTCTTTTTGTCTATGGGGAGCCGGTGACGCGGCCTCACTCTGGCCCCGCGGTGCACTTCTGGAGACATCGCAAGCAGGCTGACCTGGACCTGGCCCGGGGGGACTTTGCCCAGGCTGCCCAGCAGTTGTGGCTGGCCCTTCGGGCGCTGGGCCGGCCCCTGCCTACCTCCCACCTGGACCTGGCCTGCAGCCTGCTCTGGAACCTCATCCGCCACCTGCTACAGCGCTTCTGGGTGGGCCGCTGGCTGGCCGGCCGTGCTGGAGGCCTACAAAGGGACTGTGCCCTGAGGGCAGATGTGCGCGCCAGTGCCCGGGATGCAGCCCTTGTCTACCACAAGCTGCACCAGCTGCATGCCATGGGGAAGTACACAGGTGGGCATCTCACTGCCGCCAACTTGGCACTGAGTGCCCTGAACCTGGCGGAATGTGCAGGGGATACTGTGTCCATGGCAACGATGGCGGAGATCTATGTGGCAGCTGCCCTGAGAGTCAAGACCAGTCTCCCAAGAGCCTTGCACTTTCTGACACGCTTCTTCCTGAGTGGTGCCCGCCAGGCCTGCCTGGCACAGAGCAGCTCAGTGCCTCTTACCATGCAGTGGCTCTGCCACCCTGTGGGCCACCGTTTCTTCGTGGATGGGGACTGGGCCGTGTGCAGTGCCCCAAGGGAAAGCCTGTACAGCTTGGCCGGGAACCCAGTGGACCCCCTGGCCCAGGTGACTCAGCTATTCCGTGAACATCTCCTGGAGCGAGCGCTGAACTGTGTGGCTCAGCCCAGCCTGAGCCCCAGCCCAGGGTCAGCTGATGGGGACAGAGAATTCTCAGACGCCCTCAGCTACCTGCAGCTGCTGAACAGCTGCTCTGATGCTGCCGGGACCCCTGCCTGCAGCTTCTCCATCAGCTCTAGCATGGCTGCCACCACTGGAACAGACCCAGTGGCTAAGTGGTGGGCCTCACTGACAGCTGTGGTCATCCACTGGCTGCGGCGTGACGAAGAAGCAGCAGAGCGGCTATACCCACTGGTAGAGCAGCTGCCCCGTGCCCTGCAGGAGACCGAGAGACCCCTGCCCAGGGCGGCTCTGCATTCCTTCAAGGCTGTCCGGGCTCTGCTGGGCTGTGGAAAGTCAGAGTCTGGCCTGGCCAGCCTGGCCATCTGTGAAAAGGCCAGCGGGTACCTGCAGGATAGCCTGGCTACCACATCAACTGGCAGCTCCATCGACAAGGCTGTGCAGCTGCTCCTGTGTGACCTGCTCCTTGTGGCACGCACTAGCTTGTGGCAGCAGCAGCAGCCACCTACCTCAGCCCAGGTGGCTCAGGGTGCCAGCAGCGGGCCCCAGGCCTCTGCTCTCGAGCTTCGTGGCTTCCAGAGGGACTTGAGTGGCCTGAGGCGCCTGGCACAGAGCTTCCGGCCTGCCATGCGGAGGGTGTTTCTGCATGAGGCCACAGCCCGGCTGATGGCAGGGGCCAGCCCCACACGGACGCATCAGCTGCTGGACCGTAGTCTGAGGCGGCGGGCAGGCCCAGGGAGCAAAGGAGGTGCGGCAGAGTTGGAGCCACGGCCTACGCGGCGGGAGCACGCGGAGGCTCTGCTGCTGGCCTCGTGCTACCTGCCGCCCGGCTTCCTGTCGGCTCCTGGGCAGCGTGTGGGAATGCTTGCCGAGGCGGCCCGCACGCTCGAGAAGCTCGGAGATCGCCGGCTGCTGCACGACTGCCAGCAGATGCTCATGCGCCTGGGCGGCGGGACCACCGTCACTTCCAGCTAG

Related Sequences

XP_004868769.1 Protein

Srebf1 PREDICTED: sterol regulatory element-binding protein 1 isoform X2 [Heterocephalus glaber]

Length: 1129 aa      View alignments
>XP_004868769.1
MDCTFEDMLQLINNQNSDFPGLFDPPYAGAGAGDTDPASPGACSPSSLSPPLSLSSPLEALLGGSKATPPPSSPPQSVLTPLKMFSSVSPFSPGHGIKEELVPLTILQPPTLPSPARQPPIPQPLPPLLPQSFPAPAPPQFNSTPVLGYSSSPGGFVAETPSGSAQPPLLGLPLASPTGVIPTSFHAPVQSMAPQQLLTATAAPGTTTVTSQIQQVPVLLQPHFIKADSLLLTTMKTDVGATVKATGISSLAPGTAVQTGPLQTLVSGGTILATVPLVVDADKLPINRLAAGSKAPGSAQSRGEKRTAHNAIEKRYRSSINDKIVELKDLVVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLRSAVHKSKSLKDLVSDCGSGENADVAMEGVKSEVVDTLTPPPSDAGSPSQSSPLSLSSRSSGSGGSGSDSEPDSPVIEDSQVKPEQLPSPHSRGMLDRSRLALCALVFLCVFYNPLASLLSGRGLPSPLDATSVHHSPGRAMLGAEGRDGPGWAQWLLPPLVWLGNGLLVLLSLAFLFVYGEPVTRPHSGPAVHFWRHRKQADLDLARGDFAQAAQQLWLALRALGRPLPTSHLDLACSLLWNLIRHLLQRFWVGRWLAGRAGGLQRDCALRADVRASARDAALVYHKLHQLHAMGKYTGGHLTAANLALSALNLAECAGDTVSMATMAEIYVAAALRVKTSLPRALHFLTRFFLSGARQACLAQSSSVPLTMQWLCHPVGHRFFVDGDWAVCSAPRESLYSLAGNPVDPLAQVTQLFREHLLERALNCVAQPSLSPSPGSADGDREFSDALSYLQLLNSCSDAAGTPACSFSISSSMAATTGTDPVAKWWASLTAVVIHWLRRDEEAAERLYPLVEQLPRALQETERPLPRAALHSFKAVRALLGCGKSESGLASLAICEKASGYLQDSLATTSTGSSIDKAVQLLLCDLLLVARTSLWQQQQPPTSAQVAQGASSGPQASALELRGFQRDLSGLRRLAQSFRPAMRRVFLHEATARLMAGASPTRTHQLLDRSLRRRAGPGSKGGAAELEPRPTRREHAEALLLASCYLPPGFLSAPGQRVGMLAEAARTLEKLGDRRLLHDCQQMLMRLGGGTTVTSS