Details from NCBI annotation

Gene Symbol Tom1l2
Gene Name target of myb1-like 2 (chicken), transcript variant X4
Entrez Gene ID 101701365

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TOM1L2 ENSCPOG00000003626 (Guinea pig)

Gene Details

target of myb1-like 2 (chicken)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000003274, Guinea pig)

Protein Percentage 94.35%
CDS Percentage 91.67%
Ka/Ks Ratio 0.17087 (Ka = 0.0404, Ks = 0.2362)

TOM1L2 ENSG00000175662 (Human)

Gene Details

target of myb1-like 2 (chicken)

External Links

Gene Match (Ensembl Protein ID: ENSP00000368818, Human)

Protein Percentage 97.24%
CDS Percentage 89.35%
Ka/Ks Ratio 0.02691 (Ka = 0.0133, Ks = 0.4938)

Tom1l2 ENSMUSG00000000538 (Mouse)

Gene Details

target of myb1-like 2 (chicken)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099744, Mouse)

Protein Percentage 94.87%
CDS Percentage 87.77%
Ka/Ks Ratio 0.04744 (Ka = 0.0265, Ks = 0.5587)

Tom1l2 ENSRNOG00000003590 (Rat)

Gene Details

target of myb1-like 2 (chicken) (Tom1l2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000061635, Rat)

Protein Percentage 90.85%
CDS Percentage 86.62%
Ka/Ks Ratio 0.11205 (Ka = 0.0539, Ks = 0.4812)

Genome Location

Sequence Coding sequence

Length: 1524 bp    Location: 3466588..3593129   Strand: +
>XM_004868699.1
ATGGAATTCCTCCTTGGGAACCCGTTTAGCACGCCTGTGGGGCAGTGTCTCGAAAAAGCAACAGACGGCTCCTTGCAGAGTGAAGACTGGACATTGAACATGGAGATCTGCGACATCATCAATGAGACAGAGGAAGGGCCAAAGGATGCCATTCGAGCCCTGAAGAAGCGGCTCAGTGGGAACCGGAACTACAGGGAAGTAATGCTGGCACTGACGGTACTGGAAACATGTGTGAAGAACTGTGGCCACCGGTTCCACATCCTTGTGGCCAACCGAGACTTCATTGACAGCGTTCTGGTCAAAATCATCTCTCCCAAGAACAACCCTCCCACCATTGTGCAGGATAAAGTGCTTGCTCTGATCCAGGCATGGGCAGATGCCTTTCGGAGCAGTCCTGACCTCACTGGTGTGGTCCACATATACGAGGAGCTGAAGAGGAAGGGGGTTGAGTTTCCCATGGCAGACTTGGACGCTCTGTCTCCCATCCACACTCCCCAGCGGAGTGTCCCAGAAGTGGATCCAGCCACGACCATCCCCAGGTCCCAGTCACAACAGAGGACAACTACTGGCTCCTACTCCTCACCTTCTCCTGCTTCCTACTCTGCTCCTCAGGCCCCAGCTCTGAGTGTAACTGGTCCCATCACAGCCAACTCAGAACAGATTGCCAGGCTGCGGAGTGAGCTGGATGTAGTTCGGGGAAATACAAAAGTTATGTCTGAAATGTTAACAGAGATGGTTCCCGGGCAGGAGGACTCATCTGATCTGGAACTGCTGCAGGAGCTGAACAGGACCTGTCGGGCCATGCAGCACCGCATTGTGGAGCTCATCTCCCGTGTGTCCAATGAGGAGGTCACTGAGGAGCTGCTGCATGTTAATGACGACCTCAACAATGTCTTCCTCCGCTATGAGAGGTTTGAGCGATACAGGTCGGGCCGATCGGTTCAGAACGCCAGCAATGGAGTACTCAATGAAGTGACTGAAGACAACTTAATAGACCTGGGGCCTGGCTCTCCTGCTGTGGTGAGCCCAATGGTGGGAAGTGCAGCACCCCCCTCTTCCCTCTCCTCGCAGCTGGCAGGGCTGGACTTGGGGACAGAAAGTGTCAGCGGCACCCTCAGTTCACTTCAGCAGTGCAATCCTCGGGACGGGTTTGACATGTTTGCCCAGACCAGAGGGAACTCCTTAGCTGAGCAGCGCAAAACGGTCACCTATGAGGACCCCCAGGCTGTTGGAGGACTTGCTTCTGCACTAGATAGTCGGAAACAGAGCTCAGAAGTGATCCCCGTTGCGCAGCCCTCTGTCATGGACGACATTGAGGTGTGGCTCAGGACGGACCTGAAGGGTGACGACCTGGAAGAGGGTGTCACAAGTGAAGAGTTTGATAAGTTCCTGGAAGAAAGAGCCAAGGCCGCTGAAATGGTCCCTGACCTCCCATCACCCCCTGTGGAGGCTCCCACCCCAGCTTCCAATCCTTCTGGCCGGAAGAAGCCCGAGCGGTCAGAGGATGCCCTCTTTGCCCTGTGA

Related Sequences

XP_004868756.1 Protein

Tom1l2 PREDICTED: TOM1-like protein 2 isoform X4 [Heterocephalus glaber]

Length: 507 aa      View alignments
>XP_004868756.1
MEFLLGNPFSTPVGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLSGNRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPATTIPRSQSQQRTTTGSYSSPSPASYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQHRIVELISRVSNEEVTEELLHVNDDLNNVFLRYERFERYRSGRSVQNASNGVLNEVTEDNLIDLGPGSPAVVSPMVGSAAPPSSLSSQLAGLDLGTESVSGTLSSLQQCNPRDGFDMFAQTRGNSLAEQRKTVTYEDPQAVGGLASALDSRKQSSEVIPVAQPSVMDDIEVWLRTDLKGDDLEEGVTSEEFDKFLEERAKAAEMVPDLPSPPVEAPTPASNPSGRKKPERSEDALFAL