Details from NCBI annotation

Gene Symbol Smcr8
Gene Name Smith-Magenis syndrome chromosome region, candidate 8
Entrez Gene ID 101696614

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMCR8 ENSCPOG00000009409 (Guinea pig)

Gene Details

Smith-Magenis syndrome chromosome region, candidate 8

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008449, Guinea pig)

Protein Percentage 93.7%
CDS Percentage 92.91%
Ka/Ks Ratio 0.15149 (Ka = 0.0315, Ks = 0.2082)

SMCR8 ENSG00000176994 (Human)

Gene Details

Smith-Magenis syndrome chromosome region, candidate 8

External Links

Gene Match (Ensembl Protein ID: ENSP00000385025, Human)

Protein Percentage 91.87%
CDS Percentage 89.59%
Ka/Ks Ratio 0.10933 (Ka = 0.0416, Ks = 0.3808)

Smcr8 ENSMUSG00000049323 (Mouse)

Gene Details

Smith-Magenis syndrome chromosome region, candidate 8 homolog (human)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000055926, Mouse)

Protein Percentage 88.87%
CDS Percentage 85.55%
Ka/Ks Ratio 0.11188 (Ka = 0.0638, Ks = 0.5703)

Smcr8 ENSRNOG00000005165 (Rat)

Gene Details

Smith-Magenis syndrome chromosome region, candidate 8 (Smcr8), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006984, Rat)

Protein Percentage 88.76%
CDS Percentage 85.69%
Ka/Ks Ratio 0.11545 (Ka = 0.0634, Ks = 0.5488)

Genome Location

Sequence Coding sequence

Length: 2811 bp    Location: 3159278..3149121   Strand: -
>XM_004868680.1
ATGATCAGCGCCCCTGATGTGGTAGCTTTCACCAAAGAAGATGAGTATGAGGAAGAGCCTTACAATGAGCCGTCCCTGCCTGAGGAGTACTCCGTGCCACTCTTCCCCTTCGCCAACCAGGGAACCAACCCGTGGTCTAAGCTGTCCGGGGCCAAGTTCTCGAGGGACTTCATCCTTATTTCTGAGTTCTCTGAGCAGGTGGGACCCCAACCCTTGCTGACCATCCCCAACGACACCAAAGTTTTTGGCACCTTTGATCTCAATTACTTCTCTCTGCGGATCATGTCTGTGGATTACCAGGCTTCCTTTGTGGGCCATCCTCCTGGTTCTGCGTACCCTAAGTTGAACTTTGTGGAGGACTCCAAAGTGGTACTGGGAGACTCCAAGGAAGGAGCCTTTGCATATGTGCATCACCTAACCCTGTATGACCTAGAGGCCCGAGGTTTTGTGAGGCCCTTCTGTATGGCTTATATCTCAGCAGACCAGCATAAAATCATGCAGCAGTTCCAGGAGCTTTCAGCTGAATTTTCCAAAGCCTCCGAGTGTTTGAAATCAGGCAATAGGAAGGCATTTGCTGGGGAACTTGAAAAAAAGCTTAAAGACTTGGATTACACCAGGACAGTCCTGCATACAGAAACGGAGATCCAGAAGAAAGCCAATGATAAAGGTTTTTACTCATCTCAGGCAATTGAAAAGGCTAATGAACTGGCCAGTGTGGAGAAGTCCATCATTGAACATCAAGACCTGCTGAAGCAGATCCGCTCATACCCTCACAGGAAGGTGAAGGGGTCTGATTTGTGTCCTGGTGAGATGGAGCACACCCAGGATCAGGCTGATCATGCATCCACTACCTCTAACCCAGATGGGTCTGCGGACTCAGACAGTTACACCTGCAGACCAGCGTACACCCCAAAACTCATCAAAGCAAAGTCCACCAAGTGTTTTGACAAGAAGTTGAAGACCTTGGAGGAGCTCTGTGATACTGAGTATTTCACCCAGACCCTGGGCCAGCTCAGCCACATTGAGCACATGTTCAGAGGAGATCTGTGCTACCTCCTAACCAGTCAAATTGACCGAGCACTTCTAAAACAACAACACATAACAAACTTCCTCTTTGAAGACTTTGTGGAGGTTGATGACAGGATGGTGGAGAAACAAGACAGTGTACCCTCTCAGCCCAGTCAAGACAGGCTACCTTCCAGGTCTCTGGAAGAATGCCCGATTCCTAAAGTGTTAATTAGTGTTGGTTCCTACAAGTCCAGTGTGGAGTCTGTGTTGATCAAGATGGATCAGGAACTTCGAGATGAGGAGTACAAGGAAGTAGAGGTAACAGAATCAAGCAGTTTTGAGCCCCAGGAAAACTTGGACTACCTGGATATGGACATGAAAGGGAGCCTCAGCAGTGGTGAAAGCATTGAAGTTTTGGGCACGGAGAAGTCCACTGCTCTACTGTCAAAGTCTGACAGCCAGGCTAGCCTCACGGTACCATTGAGTCCCCAGGTGGTCCGAAGCAAAGCAGTCAGCCACAGGACCATCAGTGAGGACAGTATTGAAGTCCTGAGCACCTGTCCTTCTGAGGCCCTCATCCCTGATGACTTTAAGGCCAGCTACCCAAGTGCCATTAATGAGGAAGAATCCTATGCAGAGAACGAGGGGGCCATCCACTTCCAAGTAAGCCTCAGTCCACTGGAGCTGGGTGAGGTGCAGGAGGGTGGCTTGGAAAACACCCCACCCCAGATAGACTCCTCCTGCTGTATTGTGAAGGAGAGCAATGGTCAGCTGGTGCCGCTCCCCACTCCTGCCCACACTCACGCTGATGAGTACGGCGTGGTGAGCATTGCCCCACAGCGCTACAGGCAGAAGGACCAAGGCTTCCGTGTGGACTTTGCAGTGGAAAACATCAATCCTTCCCAAGACAACAGTTGTGAAGCATTCCCAGCTTATGAGTTGGATCCAAGCCACCTGCTGGCTAGCCGGGATGTCAGTAAGACTAGCCTGGATAACTACTCGGACACCACCAGCTACGTGAGCAGTGTGGCCTCCACCAGCTCAGACAGGACCCCCTCCTCTGCTCACCCTGTCAGCCTGTCTTCTGAGAGACATAAAAAGAAGGCTGGCCAGAATGCCTTAAAATTTATTCGCCAGTATCCCTTTGCTCACCCGGCCATCTACTCCCTGCTCAGTGGGAGGACACTTGTGGTTCTAGGAGAAGATGAGACCATAGTCAGGAAGCTTGTGACTGCACTGTCCATCTTTGTTCCCAACTATGGCCACTATGCCAAGCCTGTGAAGCACTGGGTCTCTTCTCCTTTGCACATTATGGATTTTCAGAAGTGGAAGCTTATTGGCCTGCAGAGAGTGGCCTCCCCTGGCAGTGCAGGCACCCTTCATGCCTTGAGCCGCTACAGCCGCTACACAAGCATCTTGGACCTGGACAACAAAACCCTGCGCTGTCCCTTGTACAGGGGCATGCTGGTGCCCCGCCTGGCAGACCACCGCACTCAGATCAAGCGGGGCAGCACCTATTACCTGCATGTGCAGAGCATGCTCACCCAGCTCTGCTCCAAGGCCTTCCTCTACACCTTCTGCCACCACCTGCACCTGCCTGCCCATGACAGGGAGACAGAGGAAGTGGTAGCCAGTCGCCAGCTGAGCTTCCTGAAGCTGAACCTGGGCCTAGTGAATGAGGACATCAGGGTGGTCCAGTACCTGTCTGAGCTGCTGAAGCTGTACTACATGCAAGAATCTCCTGGGACCAGCAACCCCATGCTCAGGTTTGACTATGTACCCAGCTTTTTGTACAAAATCTGA

Related Sequences

XP_004868737.1 Protein

Smcr8 PREDICTED: smith-Magenis syndrome chromosomal region candidate gene 8 protein [Heterocephalus glaber]

Length: 936 aa      View alignments
>XP_004868737.1
MISAPDVVAFTKEDEYEEEPYNEPSLPEEYSVPLFPFANQGTNPWSKLSGAKFSRDFILISEFSEQVGPQPLLTIPNDTKVFGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVEDSKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADQHKIMQQFQELSAEFSKASECLKSGNRKAFAGELEKKLKDLDYTRTVLHTETEIQKKANDKGFYSSQAIEKANELASVEKSIIEHQDLLKQIRSYPHRKVKGSDLCPGEMEHTQDQADHASTTSNPDGSADSDSYTCRPAYTPKLIKAKSTKCFDKKLKTLEELCDTEYFTQTLGQLSHIEHMFRGDLCYLLTSQIDRALLKQQHITNFLFEDFVEVDDRMVEKQDSVPSQPSQDRLPSRSLEECPIPKVLISVGSYKSSVESVLIKMDQELRDEEYKEVEVTESSSFEPQENLDYLDMDMKGSLSSGESIEVLGTEKSTALLSKSDSQASLTVPLSPQVVRSKAVSHRTISEDSIEVLSTCPSEALIPDDFKASYPSAINEEESYAENEGAIHFQVSLSPLELGEVQEGGLENTPPQIDSSCCIVKESNGQLVPLPTPAHTHADEYGVVSIAPQRYRQKDQGFRVDFAVENINPSQDNSCEAFPAYELDPSHLLASRDVSKTSLDNYSDTTSYVSSVASTSSDRTPSSAHPVSLSSERHKKKAGQNALKFIRQYPFAHPAIYSLLSGRTLVVLGEDETIVRKLVTALSIFVPNYGHYAKPVKHWVSSPLHIMDFQKWKLIGLQRVASPGSAGTLHALSRYSRYTSILDLDNKTLRCPLYRGMLVPRLADHRTQIKRGSTYYLHVQSMLTQLCSKAFLYTFCHHLHLPAHDRETEEVVASRQLSFLKLNLGLVNEDIRVVQYLSELLKLYYMQESPGTSNPMLRFDYVPSFLYKI