Sequence details NCBI ID: XM_004868646.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Cdc27
Gene Name cell division cycle 27, transcript variant X1
Entrez Gene ID 101717421

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CDC27 ENSCPOG00000002797 (Guinea pig)

Gene Details

cell division cycle 27

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000002542, Guinea pig)

Protein Percentage 99.27%
CDS Percentage 96.76%
Ka/Ks Ratio 0.02342 (Ka = 0.0032, Ks = 0.1386)

CDC27 ENSG00000004897 (Human)

Gene Details

cell division cycle 27

External Links

Gene Match (Ensembl Protein ID: ENSP00000434614, Human)

Protein Percentage 99.15%
CDS Percentage 95.99%
Ka/Ks Ratio 0.0206 (Ka = 0.0038, Ks = 0.182)

Cdc27 ENSMUSG00000020687 (Mouse)

Gene Details

cell division cycle 27

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000091452, Mouse)

Protein Percentage 97.57%
CDS Percentage 92.67%
Ka/Ks Ratio 0.03322 (Ka = 0.011, Ks = 0.3302)

Cdc27 ENSRNOG00000005904 (Rat)

Gene Details

cell division cycle 27 (Cdc27), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000007963, Rat)

Protein Percentage 97.81%
CDS Percentage 92.86%
Ka/Ks Ratio 0.03007 (Ka = 0.0099, Ks = 0.3284)

Genome Location

Sequence Coding sequence

Length: 2472 bp    Location: 2026427..2093336   Strand: +
Raw sequence   
>XM_004868646.1
ATGACGGTGCTGCAGGAACCCGTCCAGGCTGCTATATGGCAAGCACTAAACCACTATGCTTACCGAGATGCAGTTTTCCTCGCAGAACGACTGTATGCAGAAGTACACTCAGAAGAAGCCTTGTTTTTACTGGCAACCTGTTATTACCGCTCAGGAAAGGCATACAAAGCATATAGACTCTTGAAAGGTCACAGTTGTACTACACCACAGTGTAAATACCTGCTTGCAAAATGTTGTGTTGATCTCAGCAAGCTTGCAGAAGGGGAACAGATCTTATCTGGTGGAGTGTTTAATAAGCAGAAAAGCCATGATGATATTGTTACTGAGTTTGGTGATTCAGCCTGTTTTACTCTTTCACTGTTGGGACATGTATATTGCAAGACAGACCGCCTTGCCAAAGGATCAGAATGTTACCAAAAGAGCCTTAGTTTGAATCCTTTCCTCTGGTCTCCCTTTGAATCATTATGTGAAATAGGTGAAAAGCCAGATCCTGACCAAACATTTAAATTAACATCTATACAGAACTTTAGCAACTGTCTGCCTAACTCTTGTACAACACTAGTATCTAATCATAGTTTATCTCATAGACAGCCTGAGACCGTTCTTACAGAAACACCCCAGGACACAATTGAGTTAAACAGACTGAACTTAGAATCTTCCAATTCAAAATATTCCTTGAATACAGATTCCTCTTACATTGATTCAGCTGTAATTTCACCAGATACTGTCCCTCTTGGAACAGGAACTTCTATATTATCTAAACAGGTTCAAAATAAACCAAAAACTGGTCGAAGTTTATTAGGAGGACCAGCTGCCCTTAGCCCATTAACCCCAAGTTTTGGGATTTTGCCATTAGAAACCCCAAGTCCTGGAGATGGATCCTATTTACAAAACTACACTAATACACCTTCTGTAATTGACGTGCCATCTACCGGAGCCCCTACCAAAAAGTCTGTTGCCAGAATCGGCCAAACTGGAACAAAGTCTGTCTTCTCACAAAGTGGAAATAGTCGGGAGGTTACTCCAATTCTTGTTGCACAAACACAAAGTTCTGGTCCACAAACAAGTACAACACCTCAGGTATTGAGTCCTACAATTACATCGCCCCCAAATGCACTGCCACGAAGAAGTTCACGACTTTTTACCAGTGACAGCTCTACAACTAAGGAGAATAGCAAAAAATTAAAAATGAAGTTTCCACCTAAAATCCCAAACAGGAAAACAAAAAGTAAAACTAATAAAGGAGGAATAACTCAACCTAACATAAATGATAGCCTGGAAATTACAAAATTGGACTCTTCCATCATTTCAGAAGGGAAAATATCCACATTCACACCTCAGATCCAGGCTTTTAATCTACAAAAAGCAGCAGCAGAAGGTTTGATGAGCCTTCTTCGTGAAATGGGGAAAGGTTATTTAGCTTTGTGTTCATACAACTGCAAAGAAGCTATAAATATTTTGAGCCACCTACCTTCTCACCACTACAATACTGGTTGGGTATTGTGCCAAATCGGAAGAGCCTATTTTGAACTTTCAGAATACATGCAAGCTGAAAGAATATTCTCAGAAGTTAGAAGAATTGAGAATTACAGAGTTGAAGGCATGGAGATCTACTCTACAACACTTTGGCATCTTCAAAAAGATGTTGCTCTATCAGTTCTTTCAAAAGACTTAACAGACATGGATAAGAATTCACCAGAGGCCTGGTGTGCTGCAGGGAACTGTTTCAGTCTGCAACGGGAACATGATATTGCAATTAAATTCTTCCAGAGAGCAATCCAGGTCGATCCAAATTATGCTTATGCCTATACTCTATTAGGGCATGAGTTTGTGTTAACTGAAGAACTAGATAAAGCATTAGCTTGTTTTCGAAATGCTATCAGAGTAAATCCTCGACATTATAATGCATGGTATGGTTTAGGAATGATTTATTACAAACAAGAAAAATTCAGCCTTGCAGAAATGCATTTCCAGAAAGCACTTGATATCAATCCTCAAAGTTCAGTTTTACTTTGCCACATTGGAGTAGTTCAGCATGCACTGAAAAAATCTGAGAAGGCTTTGGATACCCTAAACAAAGCCATTGTTATTGATCCCAAGAACCCACTATGCAAATTTCACAGAGCCTCAGTTTTATTTGCAAATGAAAAATATAAGTCTGCTTTACAAGAACTTGAAGAATTGAAACAGATTGTTCCCAAAGAATCTCTTGTTTACTTCTTAATAGGAAAGGTTTACAAGAAGTTAGGTCAAACGCACCTCGCCCTGATGAATTTCTCTTGGGCTATGGATTTAGATCCTAAAGGAGCCAATAACCAGATTAAAGAGGCAATTGATAAGCGCTATCTTCCAGATGATGAGGAACCTATAACCCAAGAAGAACAGATCATGGGAACAGATGAATCCCAGGAGAGCAGCATGACAGATGCAGACGACACACAACTTCATGCAGCTGAGAGTGATGAATTTTAA

Related Sequences

XP_004868703.1 Protein

Cdc27 PREDICTED: cell division cycle protein 27 homolog isoform X1 [Heterocephalus glaber]

Length: 823 aa      View alignments
>XP_004868703.1
MTVLQEPVQAAIWQALNHYAYRDAVFLAERLYAEVHSEEALFLLATCYYRSGKAYKAYRLLKGHSCTTPQCKYLLAKCCVDLSKLAEGEQILSGGVFNKQKSHDDIVTEFGDSACFTLSLLGHVYCKTDRLAKGSECYQKSLSLNPFLWSPFESLCEIGEKPDPDQTFKLTSIQNFSNCLPNSCTTLVSNHSLSHRQPETVLTETPQDTIELNRLNLESSNSKYSLNTDSSYIDSAVISPDTVPLGTGTSILSKQVQNKPKTGRSLLGGPAALSPLTPSFGILPLETPSPGDGSYLQNYTNTPSVIDVPSTGAPTKKSVARIGQTGTKSVFSQSGNSREVTPILVAQTQSSGPQTSTTPQVLSPTITSPPNALPRRSSRLFTSDSSTTKENSKKLKMKFPPKIPNRKTKSKTNKGGITQPNINDSLEITKLDSSIISEGKISTFTPQIQAFNLQKAAAEGLMSLLREMGKGYLALCSYNCKEAINILSHLPSHHYNTGWVLCQIGRAYFELSEYMQAERIFSEVRRIENYRVEGMEIYSTTLWHLQKDVALSVLSKDLTDMDKNSPEAWCAAGNCFSLQREHDIAIKFFQRAIQVDPNYAYAYTLLGHEFVLTEELDKALACFRNAIRVNPRHYNAWYGLGMIYYKQEKFSLAEMHFQKALDINPQSSVLLCHIGVVQHALKKSEKALDTLNKAIVIDPKNPLCKFHRASVLFANEKYKSALQELEELKQIVPKESLVYFLIGKVYKKLGQTHLALMNFSWAMDLDPKGANNQIKEAIDKRYLPDDEEPITQEEQIMGTDESQESSMTDADDTQLHAAESDEF