Details from NCBI annotation

Gene Symbol Smarcd2
Gene Name SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, transcript variant X3
Entrez Gene ID 101711033

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SMARCD2 ENSCPOG00000011371 (Guinea pig)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010221, Guinea pig)

Protein Percentage 81.8%
CDS Percentage 82.68%
Ka/Ks Ratio 0.34369 (Ka = 0.1434, Ks = 0.4173)

SMARCD2 ENSG00000108604 (Human)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000392617, Human)

Protein Percentage 85.21%
CDS Percentage 83.68%
Ka/Ks Ratio 0.17791 (Ka = 0.1011, Ks = 0.5683)

Smarcd2 ENSMUSG00000078619 (Mouse)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021052, Mouse)

Protein Percentage 83.78%
CDS Percentage 80.94%
Ka/Ks Ratio 0.15008 (Ka = 0.1134, Ks = 0.7556)

Smarcd2 ENSRNOG00000010557 (Rat)

Gene Details

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 (Smarcd2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000014508, Rat)

Protein Percentage 83.58%
CDS Percentage 81.22%
Ka/Ks Ratio 0.16347 (Ka = 0.1162, Ks = 0.7107)

Genome Location

Sequence Coding sequence

Length: 1515 bp    Location: 1363714..1354821   Strand: -
>XM_004868632.1
ATGGCACTGGGGCTCTGCCTGCTTGTATCTTACAACCCTCTGCTGGCTATGACATTGGTCCCAGGCCTCACTTGTACTGTGCTTCTCTCTGGAGATGGGCTAAGGAGAACGGCCTGGCATGTCGCCAGGGAACCGGATGCCCATGGCTGGCTTGCAAGTGGGACCCCCTACTGGCTCCCCATTTGGCACAGCTGTTCCATTGCGACCTGGCATGCCACCCACCATGATGGATCCATTCCGAAAACGCCTGCTTGTGCCCCAGGCCCAGCCACCGATCCCTGCCCAGCGCCGGGGATTCGGGAACTTGTCCCGGAGTCTCAGGCATACATGGATCTCTTGGCTTTTGAGCGGAAGCTGGACCAGACCATTGCTCGCAAGCGGATGGAAATCCAGGAGGCCATCAAAAAGCCTCTGACGCAAAAGCGAAAGCTTCGAATCTACATTTCCAATACGTTCAGTCCCAGCAAGGCAGAAGGTGATAGTGCAGGAACTGCAGGGACCCCTGGAGGAACCCCAGCAGGGGACAAAGTGGCTTCCTGGGAACTCCGCGTGGAGGGCAAACTGCTAGATGATCCTAGCAAACAGAAGAGAAAGTTTTCTTCATTCTTCAAGAGCCTTGTCATTGAGTTGGACAAGGAATTGTATGGGCCTGACAATCACTTGGTGGAGTGGCACCGGATGCCCACCACTCAGGAGACAGATGGCTTCCAGGTGAAACGGCCAGGAGACCTCAATGTCAAGTGCACACTCCTGCTCATGCTGGATCATCAGCCTCCCCAGTATAAACTGGATCCCCGACTAGCGAGGCTACTGGGAGTGCACACACAGACGAGGGCTGCCATCATGCAGGCCCTGTGGCTTTACATAAAACACAACCAGCTGCAGGATGGACATGAGCGCGAGTACATCAACTGCAACCGTTACTTTCGCCAGATATTTAGCTGTGGACGACTCCGTTTCTCCGAGATTCCTATGAAACTGGCTGGACTGCTGCAGCATCCAGACCCCATTGTGATCAACCATGTTATTAGTGTGGACCCTAATGACCAGAAGAAGACAGCCTGTTATGACATTGATGTGGAAGTAGATGACCCACTGAAGGCCCAGATGAGCAATTTTTTAGCCTCTACCACCAACCAGCAGGAGATTGCCTCTCTTGATGTCAAGATCCATGAGACCATTGAGTCCATCAATCAGCTGAAGACTCAGAGGGATTTCATGCTCAGCTTTAGCACTGACCCCCAGGACTTCATCCAGGAATGGCTCCGTTCCCAGCGCCGAGACCTCAAGATCATCACTGATGTGATTGGAAATCCTGAGGAGGAGAGACGAGCTGCTTTCTACCACCAGCCCTGGGCCCAGGAAGCAGTGGGGAGGCATATCTTTGCCAAGGTGAGGCTCTGCCCTGTTTGGCCTCCTTTAGCTGTAACAAGAGGCCTGACCATTTTCTTCCTTCTTCAGGTGCAGCAGCGAAGGCAGGAACTGGAACAGGTGCTGGGAATTCGCCTGACCTAA

Related Sequences

XP_004868689.1 Protein

Smarcd2 PREDICTED: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 isoform X3 [Heterocephalus glaber]

Length: 504 aa      View alignments
>XP_004868689.1
MALGLCLLVSYNPLLAMTLVPGLTCTVLLSGDGLRRTAWHVAREPDAHGWLASGTPYWLPIWHSCSIATWHATHHDGSIPKTPACAPGPATDPCPAPGIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEAIKKPLTQKRKLRIYISNTFSPSKAEGDSAGTAGTPGGTPAGDKVASWELRVEGKLLDDPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTLLLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFRQIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLKIITDVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVRLCPVWPPLAVTRGLTIFFLLQVQQRRQELEQVLGIRLT