Details from NCBI annotation

Gene Symbol Psmc5
Gene Name proteasome (prosome, macropain) 26S subunit, ATPase, 5, transcript variant X1
Entrez Gene ID 101710432

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMC5 ENSCPOG00000011376 (Guinea pig)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 5

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010226, Guinea pig)

Protein Percentage 100.0%
CDS Percentage 95.32%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.1816)

PSMC5 ENSG00000087191 (Human)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 5

External Links

Gene Match (Ensembl Protein ID: ENSP00000310572, Human)

Protein Percentage 100.0%
CDS Percentage 92.04%
Ka/Ks Ratio 0.001 (Ka = 0.0004, Ks = 0.3747)

Psmc5 ENSMUSG00000020708 (Mouse)

Gene Details

protease (prosome, macropain) 26S subunit, ATPase 5

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021049, Mouse)

Protein Percentage 100.0%
CDS Percentage 89.9%
Ka/Ks Ratio 0.001 (Ka = 0.0006, Ks = 0.5674)

Psmc5 ENSRNOG00000010038 (Rat)

Gene Details

proteasome (prosome, macropain) 26S subunit, ATPase, 5 (Psmc5), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013997, Rat)

Protein Percentage 100.0%
CDS Percentage 90.31%
Ka/Ks Ratio 0.001 (Ka = 0.0005, Ks = 0.5318)

Genome Location

Sequence Coding sequence

Length: 1221 bp    Location: 1349713..1354775   Strand: +
>XM_004868628.1
ATGGCGCTGGACGGGCCAGAGCAGATGGAGCTGGAAGAGGGGAAGGCAGGCAGCGGACTCCGCCAATATTATTTGTCCAAGATTGAAGAACTCCAGTTGATTGTGAATGATAAGAGCCAAAACCTTCGGCGGCTGCAGGCACAGAGGAATGAGCTAAATGCAAAAGTTCGCCTGTTGCGGGAAGAGCTACAGCTGCTGCAGGAACAGGGCTCCTATGTGGGTGAAGTAGTCCGGGCAATGGATAAGAAGAAAGTGTTGGTCAAGGTACATCCTGAGGGCAAGTTTGTCGTAGATGTGGACAAGAACATCGACATCAATGATGTGACACCCAATTGCCGGGTGGCCCTAAGAAATGACAGCTACACTCTGCACAAGATTCTACCCAACAAGGTGGACCCTCTAGTGTCACTCATGATGGTGGAAAAGGTGCCTGACTCGACCTATGAGATGATTGGTGGATTGGACAAGCAAATCAAGGAGATCAAAGAAGTGATTGAGCTGCCCGTGAAGCACCCTGAGCTCTTTGAAGCCCTGGGCATTGCACAGCCCAAGGGAGTGCTGTTATACGGACCTCCAGGCACCGGGAAGACACTGTTGGCCCGGGCTGTGGCTCATCATACTGACTGTACCTTTATTCGTGTCTCTGGCTCAGAATTGGTACAGAAATTCATTGGGGAAGGGGCAAGAATGGTGCGGGAGCTGTTTGTCATGGCACGAGAACACGCTCCATCTATCATCTTCATGGATGAAATCGACTCCATTGGCTCCTCTCGGCTGGAGGGGGGCTCTGGAGGAGACAGTGAGGTGCAGCGCACAATGCTGGAGCTGCTTAACCAGCTAGATGGCTTTGAAGCCACCAAGAATATCAAGGTTATCATGGCTACTAATAGGATTGACATCTTGGATTCTGCACTGCTTCGCCCAGGGCGCATCGACAGAAAAATTGAATTCCCACCCCCTAATGAGGAGGCCCGGCTGGACATTTTGAAAATCCACTCCCGGAAAATGAACCTGACCCGGGGGATCAACTTGAGAAAAATTGCTGAGCTAATGCCAGGAGCATCAGGAGCTGAGGTTAAGGGCGTGTGCACAGAGGCTGGCATGTATGCACTGCGGGAACGGCGAGTCCATGTCACCCAGGAAGATTTTGAGATGGCAGTAGCCAAGGTCATGCAGAAGGATAGTGAGAAAAACATGTCCATCAAAAAGTTGTGGAAGTGA

Related Sequences

XP_004868685.1 Protein

Psmc5 PREDICTED: 26S protease regulatory subunit 8 isoform X1 [Heterocephalus glaber]

Length: 406 aa      View alignments
>XP_004868685.1
MALDGPEQMELEEGKAGSGLRQYYLSKIEELQLIVNDKSQNLRRLQAQRNELNAKVRLLREELQLLQEQGSYVGEVVRAMDKKKVLVKVHPEGKFVVDVDKNIDINDVTPNCRVALRNDSYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK