Details from NCBI annotation

Gene Symbol Ccdc47
Gene Name coiled-coil domain containing 47
Entrez Gene ID 101710076

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCDC47 ENSCPOG00000005626 (Guinea pig)

Gene Details

coiled-coil domain containing 47

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005072, Guinea pig)

Protein Percentage 97.93%
CDS Percentage 95.03%
Ka/Ks Ratio 0.04852 (Ka = 0.0095, Ks = 0.1956)

CCDC47 ENSG00000108588 (Human)

Gene Details

coiled-coil domain containing 47

External Links

Gene Match (Ensembl Protein ID: ENSP00000225726, Human)

Protein Percentage 97.93%
CDS Percentage 94.69%
Ka/Ks Ratio 0.04179 (Ka = 0.0093, Ks = 0.2233)

Ccdc47 ENSMUSG00000078622 (Mouse)

Gene Details

coiled-coil domain containing 47

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000002043, Mouse)

Protein Percentage 97.31%
CDS Percentage 91.3%
Ka/Ks Ratio 0.02585 (Ka = 0.0119, Ks = 0.4598)

Ccdc47 ENSRNOG00000009006 (Rat)

Gene Details

coiled-coil domain containing 47 (Ccdc47), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000012533, Rat)

Protein Percentage 97.1%
CDS Percentage 91.37%
Ka/Ks Ratio 0.03241 (Ka = 0.0139, Ks = 0.4284)

Genome Location

Sequence Coding sequence

Length: 1452 bp    Location: 1282367..1237364   Strand: -
>XM_004868627.1
ATGAAAGCCTTCTATGCTTTCTGTATTGTCCTTTTGGTGTTTGGAAGTGTCTCTGAAGCCAAGTTTGATGACTTTGAAGATGAGGATGACATAGTAGAATATGATGATAATGACTTTGCTGAATTTGAAGATGTCATGGAAGAATCTGTTACTGAATCTCCTCAGCGGTTGATAACCACTGAAGATGATGAAGATGAGACCACTGTGGAGTTGGAAGGGCAGGATGAAAACCAAGAAGGAGATTTTGAAGATGCAGATACCCAGGAGGGAGATACTGAGAATGAGCCATATGATGATGAAGAATTTGAAGGTTATGAAGACAAACCAGATACTTCATCTAGCAAAAATAAGGACCCAATAACAATTGTTGATGTTCCTGCACACCTCCAGAACAGTTGGGAGAGTTATTATCTAGAAATTTTGATGGTGACTGGTCTGCTTGCCTATATCATGAACTATATCATTGGGAAGAATAAAAATAGTCGCCTTGCTCAGGCTTGGTTTAACACTCATAGAGAGCTTTTGGAGAACAACTTTACCTTAGTAGGGGATGATGGAACTAACAAAGAAGCCACAAGCACAGGAAAATTGAACCAAGAGAATGAGCACATCTATAACCTGTGGTGTTCTGGTCGAGTGTGCTGTGAGGGCATGCTTATCCAGCTGAGATTCCTCAAGAGACAAGACTTACTGAATGTCCTGGCTCGGATGATGAGACCAGTGAGTGATCAAGTGCAAATAAAAGTAACCATGAATGATGAAGACATGGATACATATGTATTTGCTGTGGGCACACGAAAGGCTTTGGTGCGACTGCAGAAGGAGATGCAAGATCTGAGTGAATTTTGTAGTGATAAACCTAAGTCTGGAGCAAAATATGGGCTGCCAGACTCTTTGGCCATCCTGTCAGAGATGGGAGAAGTCACAGAGGGAATGATGGATACAAAGATGGTTCACTTTCTTACACACTATGCTGACAAGATTGAATCTGTTCATTTTTCAGACCAGTTCTCTGGTCCAAAAATTATGCAAGAGGAAGGTCAGCCTTTAAAGCTACCTGACACTAAGCGGACATTATTGTTTACATTTAATGTGCCTGGCTCAGGTAACACTTATCCAAAGGATATGGAAGCTTTGCTACCCCTGATGAACATGGTGATTTATTCTATTGACAAAGCCAAAAAGTTCCGACTCAACAGAGAAGGCAAACAAAAAGCAGATAAGAACCGTGCACGAGTAGAAGAGAACTTCTTGAAACTGACACATGTACAGAGACAGGAAGCTGCCCAATCTCGTCGTGAGGAGAAGAAAAGAGCAGAGAAGGAGCGAATCATGAATGAAGAAGATCCTGAGAAACAACGAAGGCTGGAGGAAGCTGCTTTGAGGCGTGAGCAAAAGAAGCTGGAGAAGAAGCAAATGAAAATGAAACAAATCAAAGTGAAAGCCATGTAA

Related Sequences

XP_004868684.1 Protein

Ccdc47 PREDICTED: coiled-coil domain-containing protein 47 [Heterocephalus glaber]

Length: 483 aa      View alignments
>XP_004868684.1
MKAFYAFCIVLLVFGSVSEAKFDDFEDEDDIVEYDDNDFAEFEDVMEESVTESPQRLITTEDDEDETTVELEGQDENQEGDFEDADTQEGDTENEPYDDEEFEGYEDKPDTSSSKNKDPITIVDVPAHLQNSWESYYLEILMVTGLLAYIMNYIIGKNKNSRLAQAWFNTHRELLENNFTLVGDDGTNKEATSTGKLNQENEHIYNLWCSGRVCCEGMLIQLRFLKRQDLLNVLARMMRPVSDQVQIKVTMNDEDMDTYVFAVGTRKALVRLQKEMQDLSEFCSDKPKSGAKYGLPDSLAILSEMGEVTEGMMDTKMVHFLTHYADKIESVHFSDQFSGPKIMQEEGQPLKLPDTKRTLLFTFNVPGSGNTYPKDMEALLPLMNMVIYSIDKAKKFRLNREGKQKADKNRARVEENFLKLTHVQRQEAAQSRREEKKRAEKERIMNEEDPEKQRRLEEAALRREQKKLEKKQMKMKQIKVKAM