Sequence details NCBI ID: XM_004868625.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ftsj3
Gene Name FtsJ homolog 3 (E. coli), transcript variant X2
Entrez Gene ID 101709144

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

FTSJ3 ENSCPOG00000011384 (Guinea pig)

Gene Details

FtsJ homolog 3 (E. coli)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010234, Guinea pig)

Protein Percentage 94.42%
CDS Percentage 92.76%
Ka/Ks Ratio 0.12977 (Ka = 0.0285, Ks = 0.2199)

FTSJ3 ENSG00000108592 (Human)

Gene Details

FtsJ homolog 3 (E. coli)

External Links

Gene Match (Ensembl Protein ID: ENSP00000396673, Human)

Protein Percentage 89.54%
CDS Percentage 87.82%
Ka/Ks Ratio 0.1519 (Ka = 0.059, Ks = 0.3883)

Ftsj3 ENSMUSG00000020706 (Mouse)

Gene Details

FtsJ homolog 3 (E. coli)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021048, Mouse)

Protein Percentage 89.3%
CDS Percentage 86.18%
Ka/Ks Ratio 0.12685 (Ka = 0.0638, Ks = 0.503)

Ftsj3 ENSRNOG00000009857 (Rat)

Gene Details

FtsJ homolog 3 (E. coli) (Ftsj3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000013295, Rat)

Protein Percentage 89.81%
CDS Percentage 85.96%
Ka/Ks Ratio 0.1062 (Ka = 0.0583, Ks = 0.549)

Genome Location

Sequence Coding sequence

Length: 2499 bp    Location: 1349399..1342206   Strand: -
Raw sequence   
>XM_004868625.1
ATGGGCAAGAAGGGCAAAGTTGGCAAGAGCCGGCGGGACAAGTTTTATCATTTGGCAAAGGAGACTGGTTATCGTTCCCGCTCTGCTTTCAAGCTGATCCAGCTCAATCGCCGCTTTCAGTTCCTGCAGAAAGCTCGAGCCTTATTGGATTTGTGTGCTGCGCCAGGAGGATGGCTGCAGGTGGCGGCCAAGTTTATGCCTGTGTCCAGTCTTATTGTGGGAGTGGACCTGGTTCCAATCAAGCCTCTCCCCAATGTGGTGACACTTCAGGAGGACATCACAACAGAACGCTGTAGGCAGGCCCTGAGAAAGGAGCTGAAGACTTGGAAAGTAGACGTTGTGCTCAATGATGGGGCCCCTAATGTTGGGGCTAGTTGGGTACATGACGCTTACTCGCAAGCCCACTTGACACTGATGGCTTTGCGTTTGGCTTGTGATTTTTTGGCCCATGGTGGCTGCTTCATCACAAAGGTTTTCCGTTCCCGTGACTATCAGCCCCTGCTGTGGATCTTTCAGCAGCTATTCCGCCGTGTCCAGGCCACCAAGCCCCAAGCCTCTCGCCATGAATCTGCAGAAATCTTTGTAGTCTGCCAGGGATTCTTGGCTCCTGACAAGGTTGACAGTAAATTCTTTGATCCCAAGTTTGCCTTCAAGGAGGTTGAAGTTCAGGCTAAGACAGTTACTGAGTTGGTAACTAAAAAGAAGCCAAAGGCTGAAGGCTATGCTGAGGGTGACCTGACTCTTTATCACTGTACCTCAGTTACTGACTTCCTACGGGCTGCCAACCCTGTTGACTTCCTCTCCAAGGCCAGTGAGATCTCAATAGATGATAATGAGTTGGCACAACATCCAGCTACCACTGAGGACATACGGGCATGCTGTCAGGACATCAGAGTTCTGGGGCGCAAGGAACTTAGGTCCCTACTGAACTGGAGAACAAAACTTCGGCGTTATATGGCTAAGAAGCTGAAAGAGCAAGCAAAAGCACTGGATATCAGCCTCAGCTCAGGAGAGGAGGAAGGTGATGAAGAATCTACCTCTGAGACCACAAGGCAACCCTCTAAGGAGGAGGAAGAGGAAGAGCAGCTGAACCAGACTCTGGCAGAGATGAAAGCCCAGGAGGTGGCGGAATTAAAGAGGAAGAAGAAGAAGCTGCTTCGAGAGCAGAGGAAGCAGCGGGAACGCATAGAGCTAAAGATGGATCTGCCTGGAGTTTCCATCGCAGATGAGGGAGAGACAGGCATGTTCTCCCTGTGTACCATCCGAGGTCACCAGTTGTTAGAGGAAGTAACACAAGGGGACATGAGTGCTGCAGACACACTTCTGTCTGATCTGCCAGGGGATGACATCTATGTGTCAGATGCAGAAGAGGACAATGATTCATCTCTGGACAGTGACCTGGATCCAGAAGAGTTGGCAGGGGTTGGGGGACATCAGGGACTGAAGGACCAACAGTGTGTGCGATTTGCTCAACTAGAAGATAATAAAGAAGAGGAAGAAGAGAATCCACTCCTGGTACCACTGGAGGAAAAAACAGTGCTGCAAGAAGAACAAACCAACCTGTGGTTCTCAAAGGATGGTTTCAGTTGGATTGAGGATGATGCTGATGAAGCTCTGGAAATCAGTCAGGCCCAGTTGTTGTACAAGAACCGCCAGAAGGAGCAGGAGCCGCCACAACCACTGTCACCTTCCAGTTTGAAGACTGAGAGAAAGTTTCCCCAGTACCAGAATAAGGCCCCAGATGAGAAAGAGGCTCCCTCAGGGGCAGGAGCCACCACTGACCCTGGAAGGGAAGGAAGTGACAGCTCAGACAGTGAGAGCAGTAGCAGTGAGGATGAAGAGAGTTGGGGACCATCCCGTGGTAAGAAGCAAAGCCGTGGGCCTAAGAAAGATGACGGGTTTGAGGTAGTACCTATTGAGGACTCAGTGAAACATCGGATCCTGGACCCTGAAGGCCTTGCTTTAGGTGCTGTTATTGCCTCCTCCAAAAAGGCTAAGAGGGACCTCATAGATGACTCCTTCAACAGGTATGCATTTAATGAAAATGAAAGAGAGCTTCCAGACTGGTTTGTGCAGGAAGAGAAGCAGCATCGAATACGGCAGTTGCCTCTTGACAAGAAGGAAGTGGAGCACTACCGCAAACGCTGGCGGGAAATCAATGCACGTCCCATCAAGAAAGTGGCTGAGGCCAAGGCCAGAAAGAAACGGAGGATGCTGAAGAAGCTGGAACAGACCAAGAAGAAGGCAGAAGCGGTGGTGAACACCATAGACATCTCAGAACGAGAGAAAGTGGCACAGTTGCGAAGTCTGTATAAGAAGGCTGGGCTTGGCAAGGAAAAACGTCAAGTCACCTATGTTGTAGCCAAAAAAGGTGTGGGCCGTAAAGTGCGGAGGCCAGCTGGAGTTAGAGGTCATTTCAAGGTGGTGGACTCCAGGATGAAAAAGGATCAGAGAGCACAACAACGTAAGGAGCAGAAGAAAAAACACAAACGTAAATAA

Related Sequences

XP_004868682.1 Protein

Ftsj3 PREDICTED: pre-rRNA processing protein FTSJ3 isoform X2 [Heterocephalus glaber]

Length: 832 aa      View alignments
>XP_004868682.1
MGKKGKVGKSRRDKFYHLAKETGYRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWKVDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLAHGGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVCQGFLAPDKVDSKFFDPKFAFKEVEVQAKTVTELVTKKKPKAEGYAEGDLTLYHCTSVTDFLRAANPVDFLSKASEISIDDNELAQHPATTEDIRACCQDIRVLGRKELRSLLNWRTKLRRYMAKKLKEQAKALDISLSSGEEEGDEESTSETTRQPSKEEEEEEQLNQTLAEMKAQEVAELKRKKKKLLREQRKQRERIELKMDLPGVSIADEGETGMFSLCTIRGHQLLEEVTQGDMSAADTLLSDLPGDDIYVSDAEEDNDSSLDSDLDPEELAGVGGHQGLKDQQCVRFAQLEDNKEEEEENPLLVPLEEKTVLQEEQTNLWFSKDGFSWIEDDADEALEISQAQLLYKNRQKEQEPPQPLSPSSLKTERKFPQYQNKAPDEKEAPSGAGATTDPGREGSDSSDSESSSSEDEESWGPSRGKKQSRGPKKDDGFEVVPIEDSVKHRILDPEGLALGAVIASSKKAKRDLIDDSFNRYAFNENERELPDWFVQEEKQHRIRQLPLDKKEVEHYRKRWREINARPIKKVAEAKARKKRRMLKKLEQTKKKAEAVVNTIDISEREKVAQLRSLYKKAGLGKEKRQVTYVVAKKGVGRKVRRPAGVRGHFKVVDSRMKKDQRAQQRKEQKKKHKRK