Details from NCBI annotation

Gene Symbol Limd2
Gene Name LIM domain containing 2, transcript variant X4
Entrez Gene ID 101705644

Database interlinks

Part of NW_004624849.1 (Scaffold)

For more information consult the page for NW_004624849.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LIMD2 ENSCPOG00000013844 (Guinea pig)

Gene Details

LIM domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012475, Guinea pig)

Protein Percentage 96.88%
CDS Percentage 95.31%
Ka/Ks Ratio 0.0563 (Ka = 0.0133, Ks = 0.2357)

LIMD2 ENSG00000136490 (Human)

Gene Details

LIM domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000259006, Human)

Protein Percentage 95.28%
CDS Percentage 92.91%
Ka/Ks Ratio 0.03685 (Ka = 0.0193, Ks = 0.5231)

Limd2 ENSMUSG00000040699 (Mouse)

Gene Details

LIM domain containing 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000045357, Mouse)

Protein Percentage 93.75%
CDS Percentage 88.28%
Ka/Ks Ratio 0.03522 (Ka = 0.0276, Ks = 0.7843)

Limd2 ENSRNOG00000025448 (Rat)

Gene Details

LIM domain containing 2 (Limd2), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000033334, Rat)

Protein Percentage 93.75%
CDS Percentage 89.06%
Ka/Ks Ratio 0.03952 (Ka = 0.0275, Ks = 0.6957)

Genome Location

Sequence Coding sequence

Length: 387 bp    Location: 1190057..1187586   Strand: -
>XM_004868615.1
ATGTTCCAGGCTGCAGGAGCCGCCCAGACCACCCCCTCTCATGAAGCCAAAGGCGGTGGTGGCAGCAGCACTGTGCAGCGCTCCAAGTCCTTTAGCCTGCCGGCCCAAGTGAAAGAGACCTGCACCGCCTGCCAGAAGACTGTGTACCCCATGGAGCGGCTGGTGGCTGACAAGCTTATTTTCCACAACTCTTGCTTCTGCTGCAAGCACTGCCACACCAAGCTGAGCCTGGGCAGCTATGCGGCTCTGCACGGCGAGTTTTACTGCAAACCCCACTTCCAGCAGCTGTTTAAGAGCAAAGGCAACTACGATGAGGGGTTCGGCCGCAAGCAGCACAAGGAGCTCTGGACCCACAAGGAGGTGGACTCTGGCACCAAGACAGCTTGA

Related Sequences

XP_004868672.1 Protein

Limd2 PREDICTED: LIM domain-containing protein 2 isoform X4 [Heterocephalus glaber]

Length: 128 aa      View alignments
>XP_004868672.1
MFQAAGAAQTTPSHEAKGGGGSSTVQRSKSFSLPAQVKETCTACQKTVYPMERLVADKLIFHNSCFCCKHCHTKLSLGSYAALHGEFYCKPHFQQLFKSKGNYDEGFGRKQHKELWTHKEVDSGTKTA