Sequence details NCBI ID: XM_004868562.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Ppid
Gene Name peptidylprolyl isomerase D
Entrez Gene ID 101716602

Database interlinks

Part of NW_004624848.1 (Scaffold)

For more information consult the page for NW_004624848.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PPID ENSCPOG00000001046 (Guinea pig)

Gene Details

peptidylprolyl isomerase D

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000943, Guinea pig)

Protein Percentage 93.24%
CDS Percentage 91.26%
Ka/Ks Ratio 0.11478 (Ka = 0.036, Ks = 0.314)

PPID ENSG00000171497 (Human)

Gene Details

peptidylprolyl isomerase D

External Links

Gene Match (Ensembl Protein ID: ENSP00000303754, Human)

Protein Percentage 91.62%
CDS Percentage 89.82%
Ka/Ks Ratio 0.11253 (Ka = 0.0426, Ks = 0.3787)

Ppid ENSMUSG00000027804 (Mouse)

Gene Details

peptidylprolyl isomerase D (cyclophilin D)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029382, Mouse)

Protein Percentage 90.81%
CDS Percentage 88.2%
Ka/Ks Ratio 0.09515 (Ka = 0.0471, Ks = 0.4951)

Genome Location

Sequence Coding sequence

Length: 1113 bp    Location: 3689225..3674512   Strand: -
Raw sequence   
>XM_004868562.1
ATGTCGCACCCGTCCCCACAAGCTAAGCCCTCCAACCCGAGCAACCCCCAGGTCTTCTTTGACGTGGACGTCGGCGGGGAGCGAGTTGGTCGAATTGTTTTAGAATTGTTTGCAGATATTGTACCCAAAACTGCAGAAAATTTCCGTGCATTATGTACAGGAGAAAAAGGCATTGGACCCACAACTGGGAAACCTCTTCATTTCAAAGGATGTCCTTTCCATCGAATTATTAAGAAATTTATGATTCAGGGTGGAGACTTCTCAAATCAGAATGGAACAGGTGGAGAAAGTATTTATGGTGAAAAATTTGAAGATGAAAACTTTCACTATAAGCATGATCGCGAGGGTTTATTGAGCATGGCAAATGCAGGCCATAACACGAATGGTTCTCAGTTCTTCATCACAACAGTTCCAACCCCTCATCTAGATGGGAAACATGTGGTGTTTGGTCAAGTGGTTAAAGGAATAGGTGTGGCGAGGATACTGGAAAATGTAGAAGTAAATGGTGAAAAACCTGCCAAATCGTGCATTATTGCAGAATGTGGGGAACTGAAAGAAGGTGACGACTGGGGACTATTCCCGAAAGATGGCTCTGGTGACAGTCATCCAGATTTCCCTGAAGACGCAGATGTGGATTTCAGAGATGTAGATAAAATTTTATTAATAACAGAAGACTTGAAAAACATTGGAAATACTTTTTTCAAGTCTCAGAACTGGGAGATGGCCATTAAAAAATACACAAAGGTTTTAAGGTATGTGGCTAGCGCAAAGGCTGTCACTGAAGAAGCAGACAGCTCCAGGCTGCAGCCTGTGGCCTTGAGCTGTGTGCTCAATATTGGTGCGTGTAAACTGAAGATGGCAGATTGGCAGGGAGCAGTTGACAGTTGTTTGGAGGCTCTTGAAATAGATCCATCAAATACCAAAGCACTGTATCGCAAAGCTCAAGGATGGCAAGGATTAAAAGAATATGAGCAAGCTTTGAATGATCTTAAGAAAGCTCAAGAGATAGCGCCAGAAGATAAAGCTATCCAGGCAGAACTGCTGAAAGTCAAACAAAAGATAAAGGCACAGAAAGATAAAGAGAAGGCCGTATATGCAAAAATGTTTGCTTAA

Related Sequences

XP_004868619.1 Protein

Ppid PREDICTED: peptidyl-prolyl cis-trans isomerase D [Heterocephalus glaber]

Length: 370 aa      
>XP_004868619.1
MSHPSPQAKPSNPSNPQVFFDVDVGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGHNTNGSQFFITTVPTPHLDGKHVVFGQVVKGIGVARILENVEVNGEKPAKSCIIAECGELKEGDDWGLFPKDGSGDSHPDFPEDADVDFRDVDKILLITEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVASAKAVTEEADSSRLQPVALSCVLNIGACKLKMADWQGAVDSCLEALEIDPSNTKALYRKAQGWQGLKEYEQALNDLKKAQEIAPEDKAIQAELLKVKQKIKAQKDKEKAVYAKMFA