Details from NCBI annotation

Gene Symbol Hjurp
Gene Name Holliday junction recognition protein
Entrez Gene ID 101697608

Database interlinks

Part of NW_004624847.1 (Scaffold)

For more information consult the page for NW_004624847.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

HJURP ENSCPOG00000004994 (Guinea pig)

Gene Details

Holliday junction recognition protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004495, Guinea pig)

Protein Percentage 60.58%
CDS Percentage 73.95%
Ka/Ks Ratio 0.52471 (Ka = 0.2722, Ks = 0.5188)

HJURP ENSG00000123485 (Human)

Gene Details

Holliday junction recognition protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000414109, Human)

Protein Percentage 52.51%
CDS Percentage 67.22%
Ka/Ks Ratio 0.56297 (Ka = 0.3808, Ks = 0.6764)

Hjurp ENSMUSG00000044783 (Mouse)

Gene Details

Holliday junction recognition protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000054263, Mouse)

Protein Percentage 44.68%
CDS Percentage 60.18%
Ka/Ks Ratio 0.48769 (Ka = 0.496, Ks = 1.0171)

Hjurp ENSRNOG00000022911 (Rat)

Gene Details

Holliday junction recognition protein (Hjurp), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000040906, Rat)

Protein Percentage 43.94%
CDS Percentage 59.24%
Ka/Ks Ratio 0.50913 (Ka = 0.5237, Ks = 1.0287)

Genome Location

Sequence Coding sequence

Length: 2964 bp    Location: 179853..168485   Strand: -
>XM_004868519.1
ATGGAGCTCCAGGGCCTGGAGAGCGAGTGGGCAGCGGAGGACCCGCTGCTGCACAAGCTCAGCGACAGCCGCCGCCGCTTCCAGAGGCGCATGCAGCAGCTGATAGCGAAGTACGAACACCCCTTCGAGGACGCCCCGCTGGTGGAGATGTCCACGCTGACCTACAAGACGCCTCAGGGATTGAGAATTTGGGGAGGAAAACTAGTGAAGGAAGTAAACAAAGGACAAATCCAGGTATTTCATGTCAAATCACATGGCTTGAATGCATTGTCGTGGAGAAGTGCTGATGTGAATGAGCTCTGGTGTGAGCGAACCCTGGTGCCAAAAGCTGCTGGAGACCTTGGGAGGACACCTGATTTCCTTGCCTTTCGCCCTGTTCCCCTGTTTGAGGACTTGCTGAGCATTTCTTCTGCTGCCTGGCCTCTTTGTTGCCCTGTGTTTCCTCCATCCTGGGCCGCAGGGCTCTTGACCACTGGCTTTCCTAAAACCAGTGCTCAACCTGCTCCTAAGATCACCGCTGTGGAGGTGGCAGGAGACAGCAAACCTCAACACGAGGCAGTGTCACTGGGGCCAAGTGGTGACTTTCTGGAGGAAGCTCTGGGCTGGATCCCCCTGGGAAGCCAGTGGACGGGGCAGATGACCCTGGGCCAGGGCAAGGTGATAAGCGTCTACGACCCCACACACAGGTCCCGGGAATGGCTAAAGGCATCTTCACGCAGCCTGTCACAGCCTCCCAAGCAGGGGAGGGTCAGGGAGCCATCTCTGGCCCAGTTAGGCCTATCTGTGGTCCCCGCCCCCCATTTAAAAAGTCAGTGTCAAGGTTTGCTAAGACACAGCTGCCCTCAGGCAGTTGCGAACGCGCTCCTGTCGCAGAGCTTGCTGCCACTTCCATCTGCTGTCCTTCATCCTCTCCGTGGTCGCGGGGAGCTCCCTTCCCGTGCCATGGGCATCTTGCTGGCCCTGCCCGATTTTCTCACAGGCCCTGCCTGCCCTGTCAGCCTCCCCGCTAGCCTGGGCCCCCATTCAGAAAGCAGTGACGCTGAGGCAGCCTCAGACCTGGGGGACCTGTCCGCCTGCACCTGGACGCTTCCAGGACTTTCATCTAAAGATTGTGCCCTAACTAGTGAGCTTGCTGGGATGGTCCAGAATTCCTGGCAGCTGTCAGGAACGTTGACTGCTCTTTCCTGGCAGCCTGCAGTGCCTCAGAGCCCTTTGAGAGATGAGCTAAGAAGGAAGTACCTGACCCAAGTGGACATCCTGCTCCAGGGTGCCAGGTGTTTGGAGGGTGCAGCGAAGGGAGTCAGGAAGGACACACCGAAGACGCCGGCCCTGTTCCTGGCCTCGCCTGCCATGCCTGCCCCTGGATATTCTGGTGACGACTCGACAGAGAGCCTCGGTAATGCGGCACAGCCTGCTCCCTCCCCCAGGGCCTGGGGTCCCTTGCACCCTCGCCCGGCAGACCTGGCTATAGCCCCCAGCAGTCCCAGCTGCTTAAGCACCCAGTCCTCTGAGGCCAATGACATCTGCAATGTGACGATCAGTGACTTGTACGCGGGCATGCTGCACTCCATGAGTCGACTGCTGAGCGCAAAGCCATCGTGCATAATCTCCACCAAAACATTCATCGTGCAGAACTGGAGCTCCAGGAGGAGGCAGCCCCGGAGGAGTGGGGTGCAGATGAATGAGACGTACTGCAAAGGGGCCAGGCCCTCCCGGAGGAGCACCAAGGAGCGGTCCACACCCTACCCAGAGCCCAGGAGAGAGAGGGGGACAGTAGGAGACTCCAGGAACTTACCTCATGTTCCTTGCCCCAAGACAGGCTTCGAGTTGGAGAAGGCTTTTCTTGACGAGAACAAACCCCAGCTCCATAAATTCGACCCCAGTTGGAAGGAGCTTCAGGTGACTCCCCGGAAGCGCTCCTCGTTGACTTCCTTAGACTTCAACATGGTGCATCTGGATTGGGAAAGCCGACTCATGACCTTAAAATGGTTAATTTCACCTGTGAAAAAAGTTTCTCTACCAAGAATGCCACAGGGCTGTGCAGAGAATCGGTACAGGGAGATTGGAAGCCAATTCAACAAGCTTCATCAAGCATGCTGCCCAGATCCTGGGAAACAGCTTCCTCGAGCCACCGGACGCTCAGACTCCTGGGCCTTGGCCGTGTACAGAGGTGGCTGTGTGAGTCCTGACAGTGCACGGGGCTTGGAAACATGCAGGCCAAGGCTACCTTTCAGCAGAGCCAAAGCTAAAAGCCTGAGTGAGACTTTTGAACACCTGGGCACAAGATCTGTGGAAGTGAGTGGAGGCCCACCAAAGAGGGCTTCCTCTTCCTCGATTTCCAAGACCCATCCACCACCGAGCCCAGGCCACTCTCTGCAGACATGTGACCTTTTTCAAGGACGCGATTCCGGAACCGTGAGAAAGGCAGTGTTGCCCAACCAAGCTATTTCAGTACCAAGGACAGAACCACCGAGCTGTCCAAAGAGTCGCTATGATGAAATTAAAGAAAAATTTGACTGTCTGCACCAGAAGTATTTCCAAACATCACCTCAGCAGGGGAAGGTGCTGTCACGTGTTGCCGTGTCTGCAGATAAAGCCGGGGCGGAAGTTCAGTGCCCAGTGGGAGACAGCTGTAGAGAATTAAGCCTGGACACTTTCGTCTGGGGCTTCCAGTGGTTCCCGAGAAGTCTACCGGGCTCATCTGCAGTTGAGGCTCAAGTGTCTGCAGGCACAGCCAGGGGGGCTTCTCTGATCCCCGCAAAACGACGAAGGCTGTCAGACCCCCAGGTCTGTGGACTCCAGAGCAGGGGAGCCGCTCAGCCCCTGCCAGCCCAACGGGTAAGAAAGGTCTACACCTGCTTGTCAGTTTGGGTATTTCATGTGAGCAACAGCTCTGGAGGTAGTGGCTTTTTAGGCATCAGTCTCTGTTTTTGGTTTATTTGGGGGGATCCTCGTGCCTGCTAG

Related Sequences

XP_004868576.1 Protein

Hjurp PREDICTED: Holliday junction recognition protein [Heterocephalus glaber]

Length: 987 aa      View alignments
>XP_004868576.1
MELQGLESEWAAEDPLLHKLSDSRRRFQRRMQQLIAKYEHPFEDAPLVEMSTLTYKTPQGLRIWGGKLVKEVNKGQIQVFHVKSHGLNALSWRSADVNELWCERTLVPKAAGDLGRTPDFLAFRPVPLFEDLLSISSAAWPLCCPVFPPSWAAGLLTTGFPKTSAQPAPKITAVEVAGDSKPQHEAVSLGPSGDFLEEALGWIPLGSQWTGQMTLGQGKVISVYDPTHRSREWLKASSRSLSQPPKQGRVREPSLAQLGLSVVPAPHLKSQCQGLLRHSCPQAVANALLSQSLLPLPSAVLHPLRGRGELPSRAMGILLALPDFLTGPACPVSLPASLGPHSESSDAEAASDLGDLSACTWTLPGLSSKDCALTSELAGMVQNSWQLSGTLTALSWQPAVPQSPLRDELRRKYLTQVDILLQGARCLEGAAKGVRKDTPKTPALFLASPAMPAPGYSGDDSTESLGNAAQPAPSPRAWGPLHPRPADLAIAPSSPSCLSTQSSEANDICNVTISDLYAGMLHSMSRLLSAKPSCIISTKTFIVQNWSSRRRQPRRSGVQMNETYCKGARPSRRSTKERSTPYPEPRRERGTVGDSRNLPHVPCPKTGFELEKAFLDENKPQLHKFDPSWKELQVTPRKRSSLTSLDFNMVHLDWESRLMTLKWLISPVKKVSLPRMPQGCAENRYREIGSQFNKLHQACCPDPGKQLPRATGRSDSWALAVYRGGCVSPDSARGLETCRPRLPFSRAKAKSLSETFEHLGTRSVEVSGGPPKRASSSSISKTHPPPSPGHSLQTCDLFQGRDSGTVRKAVLPNQAISVPRTEPPSCPKSRYDEIKEKFDCLHQKYFQTSPQQGKVLSRVAVSADKAGAEVQCPVGDSCRELSLDTFVWGFQWFPRSLPGSSAVEAQVSAGTARGASLIPAKRRRLSDPQVCGLQSRGAAQPLPAQRVRKVYTCLSVWVFHVSNSSGGSGFLGISLCFWFIWGDPRAC