Details from NCBI annotation

Gene Symbol Capn10
Gene Name calpain 10, transcript variant X2
Entrez Gene ID 101703723

Database interlinks

Part of NW_004624847.1 (Scaffold)

For more information consult the page for NW_004624847.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CAPN10 ENSCPOG00000012504 (Guinea pig)

Gene Details

calpain 10

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011250, Guinea pig)

Protein Percentage 88.62%
CDS Percentage 89.02%
Ka/Ks Ratio 0.13903 (Ka = 0.0582, Ks = 0.4188)

CAPN10 ENSG00000142330 (Human)

Gene Details

calpain 10

External Links

Gene Match (Ensembl Protein ID: ENSP00000375844, Human)

Protein Percentage 80.48%
CDS Percentage 83.13%
Ka/Ks Ratio 0.14661 (Ka = 0.1085, Ks = 0.74)

Capn10 ENSMUSG00000026270 (Mouse)

Gene Details

calpain 10

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027488, Mouse)

Protein Percentage 82.13%
CDS Percentage 83.13%
Ka/Ks Ratio 0.14753 (Ka = 0.1004, Ks = 0.6807)

Capn10 ENSRNOG00000045623 (Rat)

Gene Details

calpain 10 (Capn10), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000067567, Rat)

Protein Percentage 81.45%
CDS Percentage 82.53%
Ka/Ks Ratio 0.16322 (Ka = 0.1095, Ks = 0.6709)

Genome Location

Sequence Coding sequence

Length: 2007 bp    Location: 4911530..4922553   Strand: +
>XM_004868439.1
ATGCGGGCGGGCCGGGTCCAGAAGCCGGCGCGGGAGCTCTTCCGGGACGCCACCTTCCCGGCTTCGGAGTCCTCGCTCTTTTTCAATTTGTCCACGCCACTGGCCCAGTTTCGGGAGGAGATCACATGGAGGCGGCCCCAGGAAATTTGTACCACGCCCCAGCTGTTTCCAGATAACCCATGGGAGGGACAAGTGAAGCAAGGGCTGCTGGGTGACTGCTGGTTCCTGTGTGCCTGTGCCGCCCTGCAGAAGAGTCGGCACCTCCTGGACCAGGTCTTCCCTCCAGGACAGCCAAGTTGGTCCGACCAGACGTACCGTGGCCTCTTCATCTGTCGGATCTGGCAGTTCGGACGCTGGGAGGAAGTGACCATAGATGACCGTCTGCCTTGTCTTGCAGGGAGACTCTGCTTCTCCCGGTGCCAGAGAGAGGATGTGTTCTGGCTTCCCTTACTGGAAAAGGTCTATGCCAAGGTCCACGGGTCCTACGAACACCTGTGGGCAGGGCAGGTGGCCGATGCCCTGGTGGACCTAACTGGTGGCCTGGCAGAGAGGTGGAACCTGAAGGGCCCAGCTGGAAGCAGCAGGCAGCAGGATAGGCCCACGGGTGGGCAGGAGCACAGGACCTGTTGGCAGATGCTGCGCCTGAAGGACCGGTGTCTGATCAGCTGCTCGGTGCTCAGCCCCAGAGCAGGTGCCAGGGTGATGGGGGAGTTCCACGCCTTCATCGTCTCTGACCTGCAGGAGCTGCAGAGCCGGGCTGGCCAGGGCATCCTCCTGCTTCGGATTCTGAACCCCTGGGGGCGGCAGTGCTGGCAGGGACTCTGGAGAGAGGGGGGTGAAGGCTGGAGCCAGCTGGAGTCCACCGACGAGGCCAGGCTCCTGTCCCAGCTGCAGGACGGGGAGTTCTGGGTGGAGGAGGGGGAGTTCCTCAGGGAGTTTGACGAGGTCACCATCAGCTACCCAGTCACGGAGGCCGGCCACCTGCAGAGCCTCTACACAGAGAGGACACTGTGCCACGCACGGGCACTGCCTGGTGCCTGGGTCAAGGGGCAGTCGGCGGGAGGCTGCCGGAACAACAGCTGCTTTCCCTCCAACCCCAAGTTCTGGCTGCACCTGTCGGAACCCAGCGAGGTGTGTGTGGCCGTCCTGCAGAGGCCACAGAGGCGCACAGAGGCCCGGGCCCGGCCGCTACTGGGCCACGGTGCTGCCCCGGCCAGCCTCTCTGGCAAGGACTACCAGGCTGTGGGCCTGCACATCTGGAAGGTGGAGAAGCGGCGGGTCAGCCTGCCAAGGGTCCTGTCCGCGCCCCCGGTGGCAGGCACTGTGTGCCACGCCTACGACCGAGAAGTACACCTGCGCTGTGAGCTCTCCCCGGGCCGCTACCTGGCTGTCCCCAGCACCTTCCTGAAGGGTGTGTCTGCACAGTTCCTGCTGCGGGTCTTCTCCACTGGGAAGATGTCCCTCAGCCGTGCTGAGAGACCAGCGGCCCAGGGCACTGACCCCAGGGCAGCCCTGCCTGCTGACCAGGTGGAGACCATGCAGCTGCGGGGCTGCTGGAAAGCTGGCTGGACTGCGGGGGGCAGCAGGAACTTCGCCTCCTACCCCTGCAACCCCTGCCTCCCCTTCTCCGTGCCTGAGGGTGCTGGTCCCCGCTGCGTCCGAATCACCCTGCAGCAGCACTGCCGGCTCGGTGACAGCCAGCTTCACCCCATCGGCTTCCACGTCTTCCAGGTCCGGGAGGGCGCTGAGAGCCAGGATGTGCAGTCCCTTCTGCTCCAGGAGCCGCTGCTGAGCTGTGTGCCGCATCGCTATGCCCAGGAGGTGAGCCGCCTCTGCCTGCTTGCCACCGGCACCTACAGGGTTGTGCCCTCCACCTACCTGCCGGATGCAGAGGGCGCCTTCACAGTGATCATCGCCACCAGCGTGGACAGGCGCTCCATCCACAGCCAGGAGGTGCTGGGCCGCTTCCTCCAGGAGGTCTCCATCATGACAGTGATGAAAGCCTAG

Related Sequences

XP_004868496.1 Protein

Capn10 PREDICTED: calpain-10 isoform X2 [Heterocephalus glaber]

Length: 668 aa      View alignments
>XP_004868496.1
MRAGRVQKPARELFRDATFPASESSLFFNLSTPLAQFREEITWRRPQEICTTPQLFPDNPWEGQVKQGLLGDCWFLCACAALQKSRHLLDQVFPPGQPSWSDQTYRGLFICRIWQFGRWEEVTIDDRLPCLAGRLCFSRCQREDVFWLPLLEKVYAKVHGSYEHLWAGQVADALVDLTGGLAERWNLKGPAGSSRQQDRPTGGQEHRTCWQMLRLKDRCLISCSVLSPRAGARVMGEFHAFIVSDLQELQSRAGQGILLLRILNPWGRQCWQGLWREGGEGWSQLESTDEARLLSQLQDGEFWVEEGEFLREFDEVTISYPVTEAGHLQSLYTERTLCHARALPGAWVKGQSAGGCRNNSCFPSNPKFWLHLSEPSEVCVAVLQRPQRRTEARARPLLGHGAAPASLSGKDYQAVGLHIWKVEKRRVSLPRVLSAPPVAGTVCHAYDREVHLRCELSPGRYLAVPSTFLKGVSAQFLLRVFSTGKMSLSRAERPAAQGTDPRAALPADQVETMQLRGCWKAGWTAGGSRNFASYPCNPCLPFSVPEGAGPRCVRITLQQHCRLGDSQLHPIGFHVFQVREGAESQDVQSLLLQEPLLSCVPHRYAQEVSRLCLLATGTYRVVPSTYLPDAEGAFTVIIATSVDRRSIHSQEVLGRFLQEVSIMTVMKA