Sequence details NCBI ID: XM_004868428.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Otos
Gene Name otospiralin
Entrez Gene ID 101700767

Database interlinks

Part of NW_004624847.1 (Scaffold)

For more information consult the page for NW_004624847.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

OTOS ENSCPOG00000026428 (Guinea pig)

Gene Details

Cavia porcellus otospiralin (Otos), mRNA.

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000020041, Guinea pig)

Protein Percentage 86.36%
CDS Percentage 89.77%
Ka/Ks Ratio 0.1326 (Ka = 0.066, Ks = 0.4981)

OTOS ENSG00000178602 (Human)

Gene Details

otospiralin

External Links

Gene Match (Ensembl Protein ID: ENSP00000375849, Human)

Protein Percentage 88.64%
CDS Percentage 87.88%
Ka/Ks Ratio 0.0608 (Ka = 0.0501, Ks = 0.8237)

Otos ENSMUSG00000044055 (Mouse)

Gene Details

otospiralin

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000061683, Mouse)

Protein Percentage 76.14%
CDS Percentage 82.58%
Ka/Ks Ratio 0.20504 (Ka = 0.1285, Ks = 0.6265)

Otos ENSRNOG00000016567 (Rat)

Gene Details

otospiralin (Otos), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022220, Rat)

Protein Percentage 77.27%
CDS Percentage 81.06%
Ka/Ks Ratio 0.19391 (Ka = 0.1359, Ks = 0.701)

Genome Location

Sequence Coding sequence

Length: 267 bp    Location: 4688152..4685452   Strand: -
Raw sequence   
>XM_004868428.1
ATGCAGGCCCGCATGGTTCTGCGGCTGGCCCTGTGCCTCCTGCTGGGGTCGCTCACAGGGGCCAAGCCAGTGCAGGAGGAAGGCCCCTACGCTGAGCTGCCGGCTATGCCCTACTGGCCTTTCTCCACCTCCGACTTCTGGAACTACGTGCAGTACTTCCAGGCCCAGGACGCCTACCCGCAGGTGGAGGACCTGGCCCGCACCTTCTTTGCACACTTTCCCCTGGGGAGCACCCTGGGCTTCCATGTCCCCTACCAGGAGGACTGA

Related Sequences

XP_004868485.1 Protein

Otos PREDICTED: otospiralin [Heterocephalus glaber]

Length: 88 aa      View alignments
>XP_004868485.1
MQARMVLRLALCLLLGSLTGAKPVQEEGPYAELPAMPYWPFSTSDFWNYVQYFQAQDAYPQVEDLARTFFAHFPLGSTLGFHVPYQED