Details from NCBI annotation

Gene Symbol Traf3ip1
Gene Name TNF receptor-associated factor 3 interacting protein 1, transcript variant X1
Entrez Gene ID 101724773

Database interlinks

Part of NW_004624847.1 (Scaffold)

For more information consult the page for NW_004624847.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRAF3IP1 ENSCPOG00000005207 (Guinea pig)

Gene Details

TNF receptor-associated factor 3 interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004680, Guinea pig)

Protein Percentage 71.45%
CDS Percentage 76.08%
Ka/Ks Ratio 0.29497 (Ka = 0.2178, Ks = 0.7383)

TRAF3IP1 ENSG00000204104 (Human)

Gene Details

TNF receptor-associated factor 3 interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000362424, Human)

Protein Percentage 76.64%
CDS Percentage 81.55%
Ka/Ks Ratio 0.19422 (Ka = 0.1343, Ks = 0.6916)

Traf3ip1 ENSMUSG00000034292 (Mouse)

Gene Details

TRAF3 interacting protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000042391, Mouse)

Protein Percentage 75.36%
CDS Percentage 78.93%
Ka/Ks Ratio 0.13757 (Ka = 0.1447, Ks = 1.0519)

Traf3ip1 ENSRNOG00000024468 (Rat)

Gene Details

TNF receptor-associated factor 3 interacting protein 1 (Traf3ip1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000053451, Rat)

Protein Percentage 73.25%
CDS Percentage 75.74%
Ka/Ks Ratio 0.11984 (Ka = 0.1738, Ks = 1.4502)

Genome Location

Sequence Coding sequence

Length: 1944 bp    Location: 3424439..3468247   Strand: +
>XM_004868408.1
ATGAACGCGGCCGTGGTGCGGCGGACGCAGGAGGCGCTGGGCAAGGTGATCCGGAGGCCGCCGCTGACCGAGAAGCTGCTGAGCAAGCCGCCGTTCCGCTACCTGCACGACATCATCACGGAGGTGATCAGGATGACTGGTTTCCTGAAGGGGCTCTACACAGACTCCGAGATGAAGTCAGATAACGTCAAGGATAAAGATGCAAAAATTAGCTTCCTACAGAAGGCCATAGATGTGGTTGTGATGGTCTCAGGAGAGCCTTTGTTGGCCAAACCGGCTCGAATCGTGGCTGGGCATGAGCCCGAAAGAACAAATGAGCTGCTGCAGATGATCGGGAAGTGCTGTCTTAACAAGCTCTCCAGTGATGAGGCGGTGAAGAGGGTTTTAGCCGGAGAGAAGGGTGATGCTCGAGGGCGGGCTGTGCGGACCTCGAAATCTCACGAGCTGGACAATAAGAACACGAGGGAAGAGGAGTCCAGGACGCGGAAAGGCAAAGAGGACAGAAGAAACTCCGAAGTAAAAGAAAAAAGTACAAGCAGAGGTGAAAAACAGAAGGAAGAACCGAAGGAAGAGAGCAAACCAAGGGACAGAGAAAGGGACAAGGAGAAGATGAAGGAGAGCGACGGAGACCGACATAGAGACCCTGAGAGGGACAAGCTCAGAGAAGGGGAGAGAGAGAGAGCCAGAAACAGGGCCAAGCAGGACCGGGAGCGGGACAAGGGCAGAGGCAACAAGGACCAGGACAAAGAGCTGGACCGGGAAGAGGAGGGAGGGAGGAGGAGCGAGGGCAGGAAGGAGCAGGAGAGATTGCAGGGCCTGGACCAAGAGCGCGACCTGGACAGGGGCGGAGACCGGGAGCATGTGGGAGCCAGAGGCGCAGCGCACACGCACAGGCCGCCCTCCAGGGCCCCCGACAGGGAGAAGAGCGGCGAGCAGGACCGGCCAGGGAAGAAGTCAGCAAGCTCAGGGGAGATGCCTAAGAAGCCGTCAGATGAAGCTGTCAAAGACTCCAAAGCGGAAGCAGAGGTAAACTCTGAGGTGGAGATTTCCAGCAGAGTATCCAGATCATTGGCATCAAAAACTTCAAAATGGAGACCCAAAAATTCAGTGGAAGGTGACTTGCCCAGCGATGCAGAAGGAGAAGCTGGACCTGGGTCTGGGCCTCCTCTCCCGGAGAAGCCTGAGGTGTCAGAGAACCCTGAAGTCCCCAGTGAGCTTCCGTCCAGTGCCAGAAGACTTCCTCGGCCAGGCAGTGCAAGGCCAGCGCCTCCCCGGGTCAAGCGACAGGAGAGCACGGAGGCGTTAACGATGGACCGGGCGGGGAGTGGTAAGACCGTCCCCAACGTGATTATGGAGTCACGGAATTCTGACAGCGAGGAGGATGAGCATTTTGTGGTGGAAGCTGCCCCTCCGCTCACCCAAATGTCAGAACTCGAAATGGTGCCAGCAGCAGAGCTAGAGGACGACAGGAAGCACGGTGGACTTGTGAAAAAAATTTTGGAGACGAAGAAAGATTATGAGAAATTGCAGCAGGCCTCCAGACCTGGAGAGAAGGAGAAGTCGCTTGTCTTTGAGTCAGCGTGGAAGAAGGAGAAGGACATAGTTTGCAAGGAGATCGAGAAGCTTCGTGGGTCCATCCAGACCCTGTGCAAGAGCGCGCTGCCCCTGGGGAAGATCATGGACTACCTGCAGGAAGACGTGGACGCCATGCGGCACGAGCTGCAGCTGTGGCACAGTGAGAACAGGCAGCACGTGGAGGCGCTGCAGCGGGAGCAGAGCATCACAGATTGTGCTGTGGAGCCTCTGAAGGCAGAGCTGGCCGAGCTGGAGCAGCAGGTCAAAGACCAGCAAGACAAGATCTGTGCCGTGAAGGCCAATATCCTGAGGAACGAAGAGAAAATCCAGAAAATGGTGTACAGTATCAATTTGACATCGCGAAGGTGA

Related Sequences

XP_004868465.1 Protein

Traf3ip1 PREDICTED: TRAF3-interacting protein 1 isoform X1 [Heterocephalus glaber]

Length: 647 aa      View alignments
>XP_004868465.1
MNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFLKGLYTDSEMKSDNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQMIGKCCLNKLSSDEAVKRVLAGEKGDARGRAVRTSKSHELDNKNTREEESRTRKGKEDRRNSEVKEKSTSRGEKQKEEPKEESKPRDRERDKEKMKESDGDRHRDPERDKLREGERERARNRAKQDRERDKGRGNKDQDKELDREEEGGRRSEGRKEQERLQGLDQERDLDRGGDREHVGARGAAHTHRPPSRAPDREKSGEQDRPGKKSASSGEMPKKPSDEAVKDSKAEAEVNSEVEISSRVSRSLASKTSKWRPKNSVEGDLPSDAEGEAGPGSGPPLPEKPEVSENPEVPSELPSSARRLPRPGSARPAPPRVKRQESTEALTMDRAGSGKTVPNVIMESRNSDSEEDEHFVVEAAPPLTQMSELEMVPAAELEDDRKHGGLVKKILETKKDYEKLQQASRPGEKEKSLVFESAWKKEKDIVCKEIEKLRGSIQTLCKSALPLGKIMDYLQEDVDAMRHELQLWHSENRQHVEALQREQSITDCAVEPLKAELAELEQQVKDQQDKICAVKANILRNEEKIQKMVYSINLTSRR