Details from NCBI annotation

Gene Symbol Col6a3
Gene Name collagen, type VI, alpha 3, transcript variant X3
Entrez Gene ID 101717072

Database interlinks

Part of NW_004624847.1 (Scaffold)

For more information consult the page for NW_004624847.1 (Scaffold)

Genome Location

Sequence Coding sequence

Length: 8046 bp    Location: 2839765..2786560   Strand: -
>XM_004868386.1
ATGTTCTCCTTGGACACCTACGTTTCCAAGGCTCAGGCTCTAGCTGCAGTGAAGGCCCTCAAGTTCACTGGTGGGGAGTTGGCTAACATCGGCCAGGCGCTTGACTTTGTGTTGAAGAATCACTTCACCCCGGCAGTGGGCAGCCGAGTAGAGGAAGGGGTCCCCCAGGTGCTGGTCCTCATGAGTGCTGGGCCTTCTAGTGATGAGATCAGCGACAAGGTGGTAGCTCTGAAGCAGGCTAGTGTGTTCTCATTCGCCCTCGGAGTCCTAGCAGCCTCCAGGGCAGAGCTTCAGCACATAGCTACCGAGGACAGCTTGCTGTTTATGGTCCCGGAATTCCATAGCTTTGGGAACCTCCAGGAGGAGTTACTGGGGTACATTGTTGCCATTGCCCAAAGACACATTTTGTTACGACCGCCAACCATTGTCACACAAGCCATTGAAGTCAACAAGAGGGACATAGTCTTCCTGGTGGATGGCTCGTCCAAACTGGGGCTGGCCAACTTCAATGCCATCCGAGACTTCATTGTCAAAGTCATCCAGAGACTGGAGATCGGGCAGGACCTCATCCAGGTGGCGGTGGCTCAGTACGCAGACACTGTGAAGCCCGAGTTTTACTTCAATACCTACCCCAGCAAAAGGGAAGCCGTAAACGCAGTGCGGAAAATGAGGCCCATGGAGGGCCCAGCCCTGAACACAGGCTCTGCCCTGGACTTCATTCGCAACAACCTGTTCATCAGTGCAGTTGGCTCCCGGGCCGCCGAGGGGGTCCCTAAGCTGATGGTGCTGGTCACAGGTGGCAAGTCCCTGGACGCCGTCAGCCAGCCCGCCCAGGAGCTGAAGAGAAGTGGCATCATGGCCTTCACCGTCGGGAACAAGGTGGCCGATCAGGCTGAGCTGGAAGAGATCGCTTTTGATTCCTCCCTGGTGTTCATCCCGGCCGAGTTCCGAGCTGCCCCCCTGCAAGGCATCCTGCCCGGCCTGCTCTCGCCCCTCAGGACTCTCTCCGGAACCACTGAAGAGAGCAAGAGGGACATCCTGTTCCTCTTTGATGGCTCTGCCAACCTCATGGGCCAGTTCCCCGCCGTCCGTGACTTTCTCTACAAGATCATCGATGAGCTGGACGTGAAGCCAGACGGGGTCCGGATCGCTGTGGCTCAGTACAGCGATGACGTCAAACTGGAGTCCCGCTTCAACGAGCACATGACCAAGCCAGAGATCCTGAACCAGGTGAAGCGGATGAAGATCAAGATGGGCAAAACGCTGAACCTGGGCTATGCCCTGGACTTCGCTCAGAGGTACATCTTCGTGAAGTCCATGGGCAGCCGCATCGAGGACGGAGTGATGCAGGTCCTGGTGCTGCTGGTGGCGGGGCGGTCCTCGGACTCCGTGGAGGTGCCGGCGAGAAACCTGAAGCAGAGTGGCGTGGTTCCGTTCATCTTCCAAGCCAAGAATGCCGACCCTGCTGAGCTGGAGCGGATCGTGCTTTCCCCGGCTTTCATCCTGGCTGCAGAGTCGCTCCCCAAGATCGGGGAGCTGCAGCCCCAGATTGTGAACCTCCTAAAATCGGTGTACAACGGGGGCCAGCCGCCAGCTTCAGGTGAGAAGGACGTGGTGTTCCTGATCGACGGCTCCGAGGGTGTCAGGAGCGGCTTTGGGCTGCTGAAGGACTTCGTGGAGAGGCTGGTGCAGGGCCTGGACGTGGGCCCCGACCGCGTCCGTGTCGCCGTGGTGCAGTACAGTGACCGCACCAGGCCCGAGTTCTACCTGAACTCCTTCATGGACCAGCAGGGTGTCATCAGCGCCATCCGCAGGCTGACCCTGCTGGGTGGGCCAGCGCCCAGCACCGGGGCAGCCCTGGACTTTGTGCTGAAGAACATCCTGACCCGCTCTGCTGGGAGCAGGATGGAGGACGGCGTCCCCCAGCTCCTGATTGTGCTCACGGCTGACAGGTCTGGGGACGACGTGAGGGGCCCTTCGACGGTCCTGAAGAGGGGGGGGGCAGTGCCCATCAGCATCGGCATCGGGAATGCGGACATCTCGGAGATGCAGGCCATCTCCTTTATCCCGGATTTCGCCGTGGCCATCCCCACCTTCCGGGAGCTGGGGACCGTGCAGCACGTCATCTCTGAGAGGGTGACCCAGCTCGACCGTGAGGGGCTGAGCAGGCTGCAGCCCATTTTTCTGCCCCCAACGAGCCCAGGTGGTGCCAAGAGGGATGTGGTCTTCCTCATCGATGGGTCCCAAGCTGCTGTCCTGGAGTTCCAGCACATCCGCACCCTCATTGAGAGGCTGGTGGACTCCCTGGACGTGGGCTTTGAGACCACGCGGGTGGCGGTCATCCAGTTCAGCGAGGACCCCAAGGTGGAGTTTCTGCTCAATGCCCACTCCAGCAAGGATGAGGTGCAGAATGCCCTGCGGCAGCTGCGGCCCAAGGGCGGCCGACAGGTCAACGTGGGGAGCGCCCTGGAGTATGTGTCCAGGAACATCTTCAAGAGGCCGCTGGGCAGCCGCATAGAAGAGGGCGTCCCACAGTTCCTGGTGCTCATCTCATCCGGGAAGTCGGCCGACGAGGTGGACGACTCGGCTGTGGAGCTGAAGCAGTTCGGCGTGGCCCCGTTCACCATCGGCAGGAATGCAGACCAGGAGGAGCTGGTGAAGATCTCCCTGAGCCCCGAGTATGTGTTCTCAGTCAGCACCTTCAGGGAGCTGCCCAGCCTGGAGCAGAAGCTGCTGACACCCATCACCACCCTCACTGCCCAGCAGATCCAGCAGATCCTGGCGAGCACCCACTACCCTCCACCAGAGAGTGATGCAGCGGACATCGTCTTCCTCATCGACAGCTCTGATGGCGTCAGAAGTGATGGCCTTGCGCACATCCGAGACTTTGTGAGCAGGATTGTTCAAAGACTCAACATCGGGCCCAACAAAGTGAGAATCGGCCTTGTGCAGTTCAGCAATGAGGTCTTCCCCGAGTTTTTCCTGAAGACACACAGGTCCCAAGCTGCCGTGCTAGGAGCCATACGGCGCCTGAGGTTCCGGGGTGGCGCTCCGCTGAACACCGGCAGAGCTCTGGAGTATGTGGCCAAAAACCTCTTTGTTAAGTCTGCTGGGAGCCGGATAGAAGACGGGGTGCCCCAACACCTGGTCCTGCTTCTGGGCGGAAAATCCCAGGACGATATTTCTGGCTTCGCCCGGATCATCAGTTCCTCGGGGATCGTGAGTTTAGGAATTGGAAGCCGGAATGTGGACAGAACAGAGCTGCAGGCCATTGCCAATGACCCCAGGCTGGTCTTCACGGTGCGAGAGTTCAGAGAGCTCCCCAGCATAGAGGAGAGGGTCATAGGCTCGTTTGGATCCTCGGGGGCCACCCCAGCAACCCCAGTAGTCACCTCTCCTCCCTCAAGGCCAGAGAAGAAGAAAGCGGACATTGTGTTCCTGCTAGATGGCTCCATCAATTTCAGGAGGGACAATTTCCAAGAAGTGCTCCGCTTCGTGTCTGAAATCGTGGACACGGTTTATGAAGATGGCGACTCCATCCAGGTGGGGCTGGTCCAGTACAACTCTGACCCCACTGACGAATTCTTCCTGAAGGACTTTTCCTCCAAGAGGCAGATTATCGACGCCATCAACAAAGTGGTCTACAAAGGGGGGCGAAATGCCAACACCAGAGTGGGCATCCAGCACCTGCAGCTCCATCACTTCGTGCCCGAGGCGGGCAGCCGCCTGGACCAGAGGGTCCCCCAGATCGCCTTTGTGATCACTGGAGGGAAGTCGGTGGAGGACGCTCAGGATGCGAGCCTGGCACTTACCCAGAGAGGTGTCAAAGTGTTCGCGGTCGGGGTGAGGAACATCGACTCCGAGGAGGTGGGGAAGATGGCGTCCAACAGCGCCACGGCCTTCCGCGTGGGGAACGTCCAGGAGCTGTCGGAGTTGAGTGAGCAAGTTTTGGAGACTCTGCATGATGCAATGCATGAGATCCTGTGTCCTGGTGTGACCGACCTGTCCAAAGCCTGCAATCTGGACGTGATCCTGGGGTTCGATGGGTCCAGAGATCAGAATGTATTTGTGGCCCAGAAGGGCTTTGAGTCCAAGGTGGATGCCATCCTGAGCAGAATCAGCCAGATGCAGAGGATCAGCTGCGGCGGTGGCCAGCTGCCTACTGTGCGTGTGTCGGTGGTGGCCAATGCACCCTCTGGCCCCGTGGAGGCCTTTGACTTTGATGAGTACCAGCCGGAGCAGTTTGAAAAATTCCGCAACATGCGCAGCCAGCACCCCTATGTCCTCACGGCTGACACGCTGAAAGTATACCAGAATAAGTTCAGGCAGTCCTCGCCGGACAGCGTGAAGGTGGTCATTCATTTTACTGATGGCGTGGATGGAGACCTGGCCGATTTACACAGAGCCTCAGAGGAGCTCCGAGAGGAAGGTGTCCATGCCCTGATCCTGGTGGGCCTGGAACAGGTGGCCAACCTGGAGCAGCTGGCGCATCTGGAGTTCGGGCGGGGCTTCATGTACGACAGGCCTCTACGGCTCAACCTGCTGGACCTGGATTATGAGCTGGCCGAGCAGCTGGACAACATTGCCGAGAAAGCCTGCTGTGGGGTTCCCTGCAAATGCTCCGGAGAAAGGGGAGACCGTGGGCCCATTGGCAGCATCGGGCCAAAGGGCATGGCGGGGGAAGACGGCTACCGAGGCTACCCTGGCGATGAGGGCGGACCTGGCGAGCGAGGTCCGCCTGGTGTGAACGGCACTCAGGGCTTCCAGGGCTGCCCAGGCCAGAGAGGAGTGAAGGGCTCTCGAGGATTCCCGGGAGAGAAGGGTGAACTCGGAGAAATTGGGCTGGACGGTCTGGATGGTGAGGATGGAGACAAGGGGCTGCCCGGTTCTTCTGGAGAGAAGGGGAGCCCTGGGCGAAGGGGTGACAAAGGACCTAAAGGAGCCAAGGGGGAGAGAGGAGACGTCGGCATCCGAGGTGACCCGGGTGACTCGGGACAGGACAGCCAGCAGAGGGGACCCAAAGGAGAGACGGGAGACATCGGCCCCATGGGTCTCCCGGGGAGAGATGGCGTGGCCGGAAGTCCGGGGGAAACCGGGAAGGACGGCGGCTTTGGCCGAAGGGGACCCGCGGGAGCTAAGGGCAACAGAGGCGGTGCTGGCCAGGTGGGCTTCCCGGGAGAGCAGGGGACCAGAGGTGCACAGGGTCCCCCCGGCCCCATCGGACCTCCGGGCCAGGTTGGGGAGCAAGGCATCCCTGGACCCCGGGGAGCTGGAGGAACAGCTGGGGCTCCCGGAGAACGCGGCAGAACAGGGCCCTTCGGAAGGAAGGGTGAGCCTGGAGAGCCAGGACCCAAGGGAGGACTGGGGAACCGTGGCACTCTCGGGGAGACGGGAGATGACGGGCGAGATGGAGTAGGCAGCGAAGGTCACAGAGGCAAAAAAGGAGAAAGAGGATTCCCGGGCTACCCAGGACCGAAGGGTATGCCTGGTGAGCCTGGAATGGACGGAGCACCGGGACCCAAAGGCGTCAGAGGGCGAAGGGGAAATTCAGGACCTCCTGGGACAGGAGGACAGAAGGGAGACCCCGGCTTCCCTGGGCCATCCGGTCACAAGGGCATCCGCGGTGACTCCATCGATCAATGTGCCCTTATCCAAAGCATCAAGGACAAATGCCCTTGCTGCTATGGGCCCCTGGAGTGCCCCGTCTTCCCCACGGAGCTGGCCTTCGCCCTGGACACGTCTGAGGGCGTCACCCAAGATGCCTTTAGCCTCATGCGAGACGTTGTCTTGAGCCTTGTGGGCGACTTGGCCATTGCCGAGAGCAACTGCCCGAGGGGGGCCCGTGTGGCCGTGGTCACCTACAACAACGAGGTGACCACGGAGATCCGGTTTTCGGACTCCAGGAAGAAGTCAGCCCTGCTGGACAGCATTAAGAACCTTCAGGTGGCCCTGACTTCCAAGCAGCAGAGTCTGGAGACTGCCATGTCCTTTGTGGCCAGAAACACGTTTAAGCGTGTGCGGAACGGGTTCCTGATGAGGAAGGTGGCCGTTTTCTTCAGCAACAGGCCCACGAGGGCAACCCCACAGCTGCGCCAGGCGGTGCTCAAGCTGTGGGATGCGGGCATCACACCTCTGTTCCTCACCAGCCAGGAGGACCGGCAGCTCGTCAACGCCTTGCAGATCAACAACACTGCCGTGGGCCACGTGCTTGTCCTGCCCACGAGAAGGGACCTCACGGACTTCCTGAAGAACGTCCTCACGTGCCACGTGTGCCTGGACATCTGCAACATCCAACCGTCCTGCGGGTTTGGCAGCTGGCGGCCTTCCTTCCGGGACAGGAGAGCCGCAGGCAGCGATGCGGACCTGGACCTGGTGTTCCTCCTGGACAGCGAGGAGACAACCAGCCTGTTCCAGTTCAACGAGATGAAGAAGTACATTGGCTACGTGGTCAGGCAGCTGGAGCTGAGCCCCGACCCCGGGGCCTCCCAGCACTTGAGCAGGGTGGCTGTGGTGCAGCACGCACCCTACGAGTCCCTGGGCAACGCCAGCGCGCCGCCCGTGAGGGTGGGGCTGTCACTGACGGACTTCGGCTCCAAGGAGAGGCTGCTGGAGTTCTTGGGCCGTGGAGTGGTGCAGCTGCAGGGAGGCAGGGCCCTGGGCCGTGCCGTCGAATACACCGTCCAGCACGTGTTCGAGAGCGCGCCCAACCCGCGGGACCTGAAGGTCCTGGTGCTGATGCTGACCGGGGAGGTGCCGGAGCAGGAGCTGGAGGAGGCCCGCAGAGCCGTCCTGCAGGCCAAGTGCAGGGGCTACTTCTTTGTGGTCCTGGGCATTGGCCGGAAGGTGAACGTCAAGGAGGTGTACGGCTTCGCCAGTGAACCCAACGACGTCTTCTTCAAACTCATGGATAAGTCGAGCGAGCTCAACGAGGAGCCGCTGATGCGCTTCGGGAGGCTTTTGCCGTCCTTCGTTGGCAGTGAGAATGCTTTTCACTTGTCCCCAGACGTAAAACAATGTGATTGGCTCCAAGGGGACCAACCAGCAAAGAATGGTGTGAAGTTTGGTCACAAACAAGTAAACATTCCGAATAACATTACTTCAAATACTACAACCAAACCAGTGACAACAAAACCGGTGACCACCACCACAAAACCAGCAACTGTTGTAAATCTGCCGCCTGCTAAGCCAGCTGCTGGGAACCCGGCTGCCGCAAAGCCTGTGGCTGCCCAGCCTGTGGGCACCAACACAGCCACAGGCAGACCTGGGGTGGTGGTGAAGCCAGTGGCCGCAGCAAAACCTGCAGCAGCAAAGCCAGCAGCTGTGAGACCCCCTCTCCCTCCTGCAAGGGTAGCATCCACCAAGCCAGAGGCCGCCAGGACACCAGCCAAACCAGCTGCTGCCACCAAGCCAGAGGCTCTCAGGCCACAGGCCAAACCAGCAGCCCCCAGGCCAGCTGCTGCTAATCCTGCAGTGAAGGTGGTGCCCGAAGTCCAGGTGTCCGAGGTCACAGAGAACAGCGCCAGACTCCGCTGGAAGAGGCCCGAGGCCCCTGGCTCTTACTTTTATGACCTCACTGTCACCTCGGCCCAGGACCAGTCCCTGGTTCTCAGGCAGAACCTCACGGTCACGGAGCGTGTCATCGGGGGCCTGCGGGCCGGACAGACATACTACGCGGCGGTTGTCTGCTACCTGAGGTCGCAGGTCCAAGCCGTGTTCCGCGGAACCTTCAGCACAAAGAAAACTCAGCCTCCACCTCCATCGCTAGCGAGGTCAGCTTCCAGTTCAAGCATCAACCTAATGGTGAAAACTGAGCCATTGGCTTTTACCAAAACAGATATCTGTAAGCTGCCCAAAGACGACGGGACGTGCAGGGAATTTAAGCTGAAGTGGTTCTACGACGCGAAGACAGAGAGCTGTGCGAGGTTCTGGTATGGAGGCTGTGGTGGGAACGAAAACAGATTTGACTCCCAGCAGGAATGTGAAAAGGTTTGCGCTTCTGGCTCATTGCTCCCCAAACCCGGAGTCGTCAATGTGATGGGAACCTAG

Related Sequences

XP_004868443.1 Protein

Col6a3 PREDICTED: collagen alpha-3(VI) chain isoform X3 [Heterocephalus glaber]

Length: 2681 aa     
>XP_004868443.1
MFSLDTYVSKAQALAAVKALKFTGGELANIGQALDFVLKNHFTPAVGSRVEEGVPQVLVLMSAGPSSDEISDKVVALKQASVFSFALGVLAASRAELQHIATEDSLLFMVPEFHSFGNLQEELLGYIVAIAQRHILLRPPTIVTQAIEVNKRDIVFLVDGSSKLGLANFNAIRDFIVKVIQRLEIGQDLIQVAVAQYADTVKPEFYFNTYPSKREAVNAVRKMRPMEGPALNTGSALDFIRNNLFISAVGSRAAEGVPKLMVLVTGGKSLDAVSQPAQELKRSGIMAFTVGNKVADQAELEEIAFDSSLVFIPAEFRAAPLQGILPGLLSPLRTLSGTTEESKRDILFLFDGSANLMGQFPAVRDFLYKIIDELDVKPDGVRIAVAQYSDDVKLESRFNEHMTKPEILNQVKRMKIKMGKTLNLGYALDFAQRYIFVKSMGSRIEDGVMQVLVLLVAGRSSDSVEVPARNLKQSGVVPFIFQAKNADPAELERIVLSPAFILAAESLPKIGELQPQIVNLLKSVYNGGQPPASGEKDVVFLIDGSEGVRSGFGLLKDFVERLVQGLDVGPDRVRVAVVQYSDRTRPEFYLNSFMDQQGVISAIRRLTLLGGPAPSTGAALDFVLKNILTRSAGSRMEDGVPQLLIVLTADRSGDDVRGPSTVLKRGGAVPISIGIGNADISEMQAISFIPDFAVAIPTFRELGTVQHVISERVTQLDREGLSRLQPIFLPPTSPGGAKRDVVFLIDGSQAAVLEFQHIRTLIERLVDSLDVGFETTRVAVIQFSEDPKVEFLLNAHSSKDEVQNALRQLRPKGGRQVNVGSALEYVSRNIFKRPLGSRIEEGVPQFLVLISSGKSADEVDDSAVELKQFGVAPFTIGRNADQEELVKISLSPEYVFSVSTFRELPSLEQKLLTPITTLTAQQIQQILASTHYPPPESDAADIVFLIDSSDGVRSDGLAHIRDFVSRIVQRLNIGPNKVRIGLVQFSNEVFPEFFLKTHRSQAAVLGAIRRLRFRGGAPLNTGRALEYVAKNLFVKSAGSRIEDGVPQHLVLLLGGKSQDDISGFARIISSSGIVSLGIGSRNVDRTELQAIANDPRLVFTVREFRELPSIEERVIGSFGSSGATPATPVVTSPPSRPEKKKADIVFLLDGSINFRRDNFQEVLRFVSEIVDTVYEDGDSIQVGLVQYNSDPTDEFFLKDFSSKRQIIDAINKVVYKGGRNANTRVGIQHLQLHHFVPEAGSRLDQRVPQIAFVITGGKSVEDAQDASLALTQRGVKVFAVGVRNIDSEEVGKMASNSATAFRVGNVQELSELSEQVLETLHDAMHEILCPGVTDLSKACNLDVILGFDGSRDQNVFVAQKGFESKVDAILSRISQMQRISCGGGQLPTVRVSVVANAPSGPVEAFDFDEYQPEQFEKFRNMRSQHPYVLTADTLKVYQNKFRQSSPDSVKVVIHFTDGVDGDLADLHRASEELREEGVHALILVGLEQVANLEQLAHLEFGRGFMYDRPLRLNLLDLDYELAEQLDNIAEKACCGVPCKCSGERGDRGPIGSIGPKGMAGEDGYRGYPGDEGGPGERGPPGVNGTQGFQGCPGQRGVKGSRGFPGEKGELGEIGLDGLDGEDGDKGLPGSSGEKGSPGRRGDKGPKGAKGERGDVGIRGDPGDSGQDSQQRGPKGETGDIGPMGLPGRDGVAGSPGETGKDGGFGRRGPAGAKGNRGGAGQVGFPGEQGTRGAQGPPGPIGPPGQVGEQGIPGPRGAGGTAGAPGERGRTGPFGRKGEPGEPGPKGGLGNRGTLGETGDDGRDGVGSEGHRGKKGERGFPGYPGPKGMPGEPGMDGAPGPKGVRGRRGNSGPPGTGGQKGDPGFPGPSGHKGIRGDSIDQCALIQSIKDKCPCCYGPLECPVFPTELAFALDTSEGVTQDAFSLMRDVVLSLVGDLAIAESNCPRGARVAVVTYNNEVTTEIRFSDSRKKSALLDSIKNLQVALTSKQQSLETAMSFVARNTFKRVRNGFLMRKVAVFFSNRPTRATPQLRQAVLKLWDAGITPLFLTSQEDRQLVNALQINNTAVGHVLVLPTRRDLTDFLKNVLTCHVCLDICNIQPSCGFGSWRPSFRDRRAAGSDADLDLVFLLDSEETTSLFQFNEMKKYIGYVVRQLELSPDPGASQHLSRVAVVQHAPYESLGNASAPPVRVGLSLTDFGSKERLLEFLGRGVVQLQGGRALGRAVEYTVQHVFESAPNPRDLKVLVLMLTGEVPEQELEEARRAVLQAKCRGYFFVVLGIGRKVNVKEVYGFASEPNDVFFKLMDKSSELNEEPLMRFGRLLPSFVGSENAFHLSPDVKQCDWLQGDQPAKNGVKFGHKQVNIPNNITSNTTTKPVTTKPVTTTTKPATVVNLPPAKPAAGNPAAAKPVAAQPVGTNTATGRPGVVVKPVAAAKPAAAKPAAVRPPLPPARVASTKPEAARTPAKPAAATKPEALRPQAKPAAPRPAAANPAVKVVPEVQVSEVTENSARLRWKRPEAPGSYFYDLTVTSAQDQSLVLRQNLTVTERVIGGLRAGQTYYAAVVCYLRSQVQAVFRGTFSTKKTQPPPPSLARSASSSSINLMVKTEPLAFTKTDICKLPKDDGTCREFKLKWFYDAKTESCARFWYGGCGGNENRFDSQQECEKVCASGSLLPKPGVVNVMGT