Sequence details NCBI ID: XM_004868354.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tpo
Gene Name thyroid peroxidase
Entrez Gene ID 101704548

Database interlinks

Part of NW_004624846.1 (Scaffold)

For more information consult the page for NW_004624846.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TPO ENSCPOG00000021741 (Guinea pig)

Gene Details

thyroid peroxidase

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000016630, Guinea pig)

Protein Percentage 78.55%
CDS Percentage 81.61%
Ka/Ks Ratio 0.19499 (Ka = 0.1301, Ks = 0.6672)

TPO ENSG00000115705 (Human)

Gene Details

thyroid peroxidase

External Links

Gene Match (Ensembl Protein ID: ENSP00000318820, Human)

Protein Percentage 72.06%
CDS Percentage 76.83%
Ka/Ks Ratio 0.13909 (Ka = 0.1609, Ks = 1.1565)

Tpo ENSMUSG00000020673 (Mouse)

Gene Details

thyroid peroxidase

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000021005, Mouse)

Protein Percentage 72.4%
CDS Percentage 75.24%
Ka/Ks Ratio 0.12994 (Ka = 0.1611, Ks = 1.2399)

Tpo ENSRNOG00000004646 (Rat)

Gene Details

thyroid peroxidase (Tpo), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006526, Rat)

Protein Percentage 73.22%
CDS Percentage 75.09%
Ka/Ks Ratio 0.12572 (Ka = 0.1587, Ks = 1.2625)

Genome Location

Sequence Coding sequence

Length: 2715 bp    Location: 1962221..1939780   Strand: -
Raw sequence   
>XM_004868354.1
ATGGGCAGCCTGGTGCCAGGGACACCCGAGTGCATTCTGTGGCTGCCCCACCTCCTGTCGGCTGGAGTGGACGTCAGCACAGAGCCCGGGTCCAGGTGCCATGACCCTGTGACTGAGTTCCGAGCACACCTCGGGATGAGGAAGCCTGTGGTGGTAGCCATCAAACTGGTGGTGCTCTGTGCTGGAGTTCTCCTCCCTTTCATCTTGAGAGGCAGAGGACTCCTCTGGGGAAGTTCCGGGAAGGCTCGAGTTCTCAGCGTGCTGGAGGCAAGCGTGCGCACGGTGGACAGGGCCGTCTACACCTCCCTGGGAAGGAGCCTCAGAAAGAGGGACATCACATCCCCATCTGAGCTGCTGTCTTTCTCCAAGCTCCCCGAGCCAGCAGGCAGAGCCCTCTCCCGAGCCGCGGAGATCATGGAGGCCTCCATCCAGGCACTGGGGCTGACGCAGCTGCAGCTTCCCCCCGACGTTTCATCAGAAGATGTACTGAACATGATTGCAAATCTGTCTGGCTGCCTACCTTACATGCAGCCACCACGATGCCCGAACACCTGCCTGGCAAACAAGTACAGACTCATCACTGGCGCCTGCAACAACAGGGATCACCCCACCTGGGGCGCCTCCAACACAGCCCTGGCCCGCTGGCTCCCTCCAGCCTACGAAGATGGCTTCAGCCAGCCCCGAGGCTGGAACCCCAGCCTCCTGTATCACGGCTTTCCGCTGCCCCCGGTACGGGAGGTGACTCAGAAAGTTATTCAAGTTCCAAATGAGGCAGTGACCGAGGACGCCCAGTATTCCGACTTCCTGACAGTGTGGGGCCAGTACATCGGCCATGACATGGCACTCACCCCACAGAGCACGGCCGGCGCCGACTGCCAGCTGACCTGTGAGAACCGGAGCCCCTGCTTCCCTATACAGCTCCCCGCCGACGCCCCGCAGGGCCCCCGGTGCCTGCCCTTTTCCCGCTCGGCGGCCGCCTGCGGCTCAGGGACACGCGGCGCGCTCCTGGTCAATCTCTCCGCGGCGGCCACGCGGCAGCAGGTGAACGCGCTCACCTCCTTCCTAGACGCCTCCACAGTCTACGGCAGCTCCGCGGCCGCCGAGCGGTTCCTGCGCGACTGGGCCGGCGCGGCTGGGCGGCTCCGAGTCAACACGCGCCACCGCGACGCTGGCCGCGCCCTCCTGCCCTTCACGCCGCTGCACGCGCCGGCCGCCTGCGCCCCGGCGCCCGGCGCCCCTCACGCAGCCCGCGCTCCCTGCTTCCTGGCGGGCGACGGCCGCGCCAGCGAGGTCCCTGCGCTCGCCGCCCTGCACACGCTGTGGCTGCGCGAGCACAACCGCCTGGCCGCGGCGCTCGGGGCCCTGAACCCGCACTGGAGCGCGGACACCGTGTACCAGGAGGCGCGCAAGGTGGTGGGCGCCCTGCACCAGATCATCACCCTGAGGGATTACAGCCCCAGGATCCTGGGTCCCGACGCCTTCCGGCAGCACGTGGGCCCCTACGAAGGCTACGACCCCACTGTGAACCCCACGGTATCCAATGTCTTCGCCACCGCCGCCTTCCGCTTCGGCCACGCCGCTATCCACCCCCTGGCGAGGCGGCTGGACACGGCCTTCAAGGACGACCCGGACCTCCCCCCGCTGCTGCTGGGCGATGCCTTCTTCAGCCCCTGGAGGCTCATCGGGGAAGGTGGCGTGGACCCCATCCTGCGGGGCCTTCTCGCCCGGCCAGCCAAGGTGCCGGTGCCTGAGCAGCTGATGAACGAGGAGCTGACCGAGAGGCTCTTTGTGCTGTCCACCCCTGGTTCCCTGGACCTGGCATCGCTCAACCTGCAGAGGGGCCGGGACCACGGCCTGCCAGGGTACAATGCGTGGAGAGAGCTCTGTGGCCTGCCCCCACTGCAGACCCCGACCGACCTGCACGGGGCTGTCAGCAACAGGAGTGTGGTGGACAGGATCCTGGCCCTCTACAAGCACGGGGACAACGTGGATGTGTGGCTGGGCGGCCTGTCCGAGGACTTCCTGCCAGGGGCCAGGACCGGCCCCCTGTTTGCTTGCATCATCGGGAAGCAGATGAAGGCGCTGAGGGACGGGGACAGGTTTTGGTGGGAGAACAGCCCTGTCTTCACAGAGGCTCAGCGACGGGAGCTGGGAAAACACTCCCTGTCTCGGGTCATCTGCGACAACTCTGGCCTCAGCCATGTGCCCAGGGACGCCTTCCGCGTCGGGCGGTTCCCCCAGGACTTTGAGTCCTGTGAGCACATCCCCAGCCTGGACCTGGAAGCATGGAGAGAGACCTTCCTGCAAGATGACAGGTGCAGCTCACCAGACAAGGTGGAGAATGGGGATTTCATGCACTGTGAGGATTCTGGAAAGCAAGTGCTGGTGTATTCCTGTCACCATGGATACGAGCTTCACGGGCAGGAGCAGGTCACTTGCACCCCAAATGGGTGGGACGCCCAGCCGCCTGTCTGCAAAGATGTGGACGAGTGTGCAGACCCAGTGCTCCCGCCCTGCCACCCCTCCGCGCACTGCAGGAACACCAGGGGCAGCTTCCAGTGCCTGTGCACTGACCCCTACGTGCTGGCTGAGGACGCCAGGACCTGTGTAGACTCTGGCCGGCTCCCGCGGGCGTCTTGGGTCTCCCTCGCACTGGGGGCACTGCTGGTCGGCGTCTTGGCGGGCATCACCTGGACGGTGATCTGCAGGTGGTAA

Related Sequences

XP_004868411.1 Protein

Tpo PREDICTED: thyroid peroxidase [Heterocephalus glaber]

Length: 904 aa      View alignments
>XP_004868411.1
MGSLVPGTPECILWLPHLLSAGVDVSTEPGSRCHDPVTEFRAHLGMRKPVVVAIKLVVLCAGVLLPFILRGRGLLWGSSGKARVLSVLEASVRTVDRAVYTSLGRSLRKRDITSPSELLSFSKLPEPAGRALSRAAEIMEASIQALGLTQLQLPPDVSSEDVLNMIANLSGCLPYMQPPRCPNTCLANKYRLITGACNNRDHPTWGASNTALARWLPPAYEDGFSQPRGWNPSLLYHGFPLPPVREVTQKVIQVPNEAVTEDAQYSDFLTVWGQYIGHDMALTPQSTAGADCQLTCENRSPCFPIQLPADAPQGPRCLPFSRSAAACGSGTRGALLVNLSAAATRQQVNALTSFLDASTVYGSSAAAERFLRDWAGAAGRLRVNTRHRDAGRALLPFTPLHAPAACAPAPGAPHAARAPCFLAGDGRASEVPALAALHTLWLREHNRLAAALGALNPHWSADTVYQEARKVVGALHQIITLRDYSPRILGPDAFRQHVGPYEGYDPTVNPTVSNVFATAAFRFGHAAIHPLARRLDTAFKDDPDLPPLLLGDAFFSPWRLIGEGGVDPILRGLLARPAKVPVPEQLMNEELTERLFVLSTPGSLDLASLNLQRGRDHGLPGYNAWRELCGLPPLQTPTDLHGAVSNRSVVDRILALYKHGDNVDVWLGGLSEDFLPGARTGPLFACIIGKQMKALRDGDRFWWENSPVFTEAQRRELGKHSLSRVICDNSGLSHVPRDAFRVGRFPQDFESCEHIPSLDLEAWRETFLQDDRCSSPDKVENGDFMHCEDSGKQVLVYSCHHGYELHGQEQVTCTPNGWDAQPPVCKDVDECADPVLPPCHPSAHCRNTRGSFQCLCTDPYVLAEDARTCVDSGRLPRASWVSLALGALLVGVLAGITWTVICRW