Sequence details NCBI ID: XM_004868337.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tssc1
Gene Name tumor suppressing subtransferable candidate 1, transcript variant X1
Entrez Gene ID 101716600

Database interlinks

Part of NW_004624846.1 (Scaffold)

For more information consult the page for NW_004624846.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TSSC1 ENSCPOG00000005737 (Guinea pig)

Gene Details

tumor suppressing subtransferable candidate 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000005174, Guinea pig)

Protein Percentage 94.83%
CDS Percentage 91.21%
Ka/Ks Ratio 0.05171 (Ka = 0.0238, Ks = 0.4603)

TSSC1 ENSG00000032389 (Human)

Gene Details

tumor suppressing subtransferable candidate 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000371559, Human)

Protein Percentage 92.51%
CDS Percentage 87.42%
Ka/Ks Ratio 0.04457 (Ka = 0.0345, Ks = 0.7751)

Tssc1 ENSMUSG00000036613 (Mouse)

Gene Details

tumor suppressing subtransferable candidate 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000038845, Mouse)

Protein Percentage 92.75%
CDS Percentage 86.44%
Ka/Ks Ratio 0.0408 (Ka = 0.0351, Ks = 0.8592)

Genome Location

Sequence Coding sequence

Length: 1164 bp    Location: 5251329..5347062   Strand: +
Raw sequence   
>XM_004868337.1
ATGGAGGACGATGCGCCGGTGATCTACGGCCTGGAGTTCCAGGCACGGGCTCTCACACCTCAGACTGCAGAAACAGATGCCATCCGATTTTTGGTTGGGACGCAGTCTCTTAAATATGATAATCAGATCCACATCATAGATTTTGATGATGAAAACAACATTATAAATAAGAACGTCCTCCTCCACCAAGCGGGTGAAATCTGGCACATTAGTGCCAGCCCCTCAGACAAAGGGGTGCTGGCTACCTGCTACAATAAAACTCCCGACAGCCGTGTCCTGGCATGTGCGGCCGTGTGGAGGATGCCCGAGGAGCTGGAGTCCGTTGGCCACGAGTCCCCTGACGACTCGGCCAGCACCACGCAGACCCTGGAGCTGCTGTGTCAACTTGGGAGTGCGGCCCCTGGCAACGTGGCCTGTGTCACGTGGGAGCCAATGGGAGATGGGAAGAAAGTCATTTCTCTGGCCGATAACCACATCCTGCTCTGGGACCTCCAGGAAAGCTCTAACCAGGCCGTGCTGGCCGGCTCTGCATCCCTGGAAGGGAAGGGACAGCTGAGGTTCACCTCGGGACGCTGGAGCCCGCATCACAACTGCACCCAGGTGGCCACTGCCAATGACACCACGCTCCGTGGCTGGGACACGCGCAGCATGAGCCAGATCTACTGTATCGAGAACGCCCACGGACAGCTGGTGCGCGACCTCGACTTCAATCCTAACAAGCAGTACTACTTAGCAAGCTGTGGGGACGACTGCAAGGTGAAGTTCTGGGACACCCGGAATGTCACGGAGCCTGTCAGGACCCTGGAGGAGCACTCCCACTGGGTGTGGAGCGTCCGCTACAACCACTCCCATGACCAGCTGGTGCTCACCGGCAGCAGCGACAGCAGGGTTATCCTGTCCAACATGGTGTCCATCTCCTCGGAGCCCTTTGGCCACCTGGTGGATGACGACGACGTCAGTGACCAGGAGGAGCACCATGCAGAGGAGAAGAGTAAGGAGCCGCTGCAGGACAATGTCATCGCGACCTATGAGGAGCATGAGGACAGTGTGTATGCCGTTGACTGGTCCTCGGCTGACCCGTGGCTGTTTGCATCCCTGAGTTACGACGGGAGGCTGGTCATCAACAGGGTTCCCAGGGCGCTCAAGTACCACATCCTGCTCTAG

Related Sequences

XP_004868394.1 Protein

Tssc1 PREDICTED: protein TSSC1 isoform X1 [Heterocephalus glaber]

Length: 387 aa      View alignments
>XP_004868394.1
MEDDAPVIYGLEFQARALTPQTAETDAIRFLVGTQSLKYDNQIHIIDFDDENNIINKNVLLHQAGEIWHISASPSDKGVLATCYNKTPDSRVLACAAVWRMPEELESVGHESPDDSASTTQTLELLCQLGSAAPGNVACVTWEPMGDGKKVISLADNHILLWDLQESSNQAVLAGSASLEGKGQLRFTSGRWSPHHNCTQVATANDTTLRGWDTRSMSQIYCIENAHGQLVRDLDFNPNKQYYLASCGDDCKVKFWDTRNVTEPVRTLEEHSHWVWSVRYNHSHDQLVLTGSSDSRVILSNMVSISSEPFGHLVDDDDVSDQEEHHAEEKSKEPLQDNVIATYEEHEDSVYAVDWSSADPWLFASLSYDGRLVINRVPRALKYHILL