Details from NCBI annotation

Gene Symbol Ankrd42
Gene Name ankyrin repeat domain 42, transcript variant X1
Entrez Gene ID 101716141

Database interlinks

Part of NW_004624845.1 (Scaffold)

For more information consult the page for NW_004624845.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ANKRD42 ENSCPOG00000011236 (Guinea pig)

Gene Details

ankyrin repeat domain 42

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010102, Guinea pig)

Protein Percentage 90.33%
CDS Percentage 92.46%
Ka/Ks Ratio 0.25391 (Ka = 0.0488, Ks = 0.1924)

ANKRD42 ENSG00000137494 (Human)

Gene Details

ankyrin repeat domain 42

External Links

Gene Match (Ensembl Protein ID: ENSP00000377051, Human)

Protein Percentage 83.8%
CDS Percentage 86.38%
Ka/Ks Ratio 0.2235 (Ka = 0.0923, Ks = 0.413)

Ankrd42 ENSMUSG00000041343 (Mouse)

Gene Details

ankyrin repeat domain 42

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113767, Mouse)

Protein Percentage 81.98%
CDS Percentage 83.33%
Ka/Ks Ratio 0.16918 (Ka = 0.1019, Ks = 0.6022)

Ankrd42 ENSRNOG00000009664 (Rat)

Gene Details

ankyrin repeat domain 42 (Ankrd42), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000062031, Rat)

Protein Percentage 81.2%
CDS Percentage 83.01%
Ka/Ks Ratio 0.17711 (Ka = 0.1069, Ks = 0.6035)

Genome Location

Sequence Coding sequence

Length: 1554 bp    Location: 6705172..6655836   Strand: -
>XM_004868268.1
ATGCCTGAGGTGGCCAATTCGGGCCCCTCCACTTCCTCTAGGGAGACTGCAAAGTCGTGTTCCAGGAAGAAGGTGAGTCTCGGTAGCATCCATGATGCAGTACGAGCCGGAGATATAAAACAGCTTTCAGAGATGGTGGAACGTGGAGCCAGCATTAATGAAGTTGATGTTCTCCATAAGTTTACTCCTTTACACTGGGCAGCACATTCTGGAAGTTTAGAGTGTCTTCATTGGCTGCTCTGGCATGGAGCTGATATCACACAAGTAACTACAAGAGGCTGGACAGCAGCTCACATAGCTGCAATCAGGGGTCAAGATGCTTGTATGCAGGCTCTTATAATCAATGGAGCAAATCTGGCAACTCAAGATGATCGTGGATGTACTCCTGTACACCTTGCAGCAACTCATGGTCATTCTTTCACTTTACAAGTAATGCTTCGAAGTGGAGTGGATCCTAGTGTGACTGACAAGAGAGAATGGAAGTCTGTACATTATGCAGCTTTTCATGGGCGGCTTGGCTGCTTACAACTTCTCATCAAATGGGGATGTGGTATTGAAGATGTGGACTACAATGGAAATCTTCCAGTTCACTTAGCAGCCATGGAAGGCCACCTTCACTGTTTTAAATTCCTACTCAGTAGAATGAGCAATGGCATACAAGCTTTAAAAGCCTTTAATGACAATGGAGAAAATGTTTTGGACCTGGCCCAGAGGTTCTTTAAGCAAAATATTTTACAGTTTATCCAAGGGGCTGCATGGGAAGGAAATAACCCAGAAGATCAGGAAATTTTAGCATTTCCAGGTCATGTGGCTGCCTTTAAGGGTGATTTGGAAATGCTTAAGAAATTATTAGAAGAGGGCATAATCAGTTTTAACGAGCGTGACGATAATGGATCAACTCCAATGCATAAAGCTGCGGAACAAGGCCACATAGAATGTTTGCAGTGGCTAATTAATATGGGAGCAGACAATAATATTACCAACAAAGCAGGAGAGAGACCCAGTGATGTAGCTAAGAGATTTGCCCATTTGGCAGCAGTAAAACTATTAGAAGGGGTGCAGAAATATGATATAGATGATGAAAATGAAATTGATGAAAATGATATGAAGTTTTTTGTAAGGCATGGTGTCGAGGGAAGCACTGATGCCAAGGAAGATTTATGTTTGAGTGAGTCGGATAAAACAGATGCCAGAATGAGAGCTTATAAGAAGATTGTAGAATTGAGACACTCCCTGGAAATTGCTGAGAGCAACTACAAACATTTGGGTGGGATAACAGAAGAGGATCTAAAGCAGAAGAAAGAACAACTTGAGTCTGAAAAGATCATCAAAGAGCTACAAGGCCAGCTAGAATATGAACGACTACGTAGAGAAAAATTAGAATGTCAACTAGATGAGTATCGAGCAGAAGTGGATGACCTCAGAGAAACAATAAAGAAAATTCAGGTCCCTAACTTAGTGGCTACGGAAGATGACTCAGGTGAGTCCAGCAAAGAGAAGAGGCAAGTAAAGAAAAAGCTGTCTTCTGGGGGGGTGTTTATAAGAAGGTTCTAA

Related Sequences

XP_004868325.1 Protein

Ankrd42 PREDICTED: ankyrin repeat domain-containing protein 42 isoform X1 [Heterocephalus glaber]

Length: 517 aa      View alignments
>XP_004868325.1
MPEVANSGPSTSSRETAKSCSRKKVSLGSIHDAVRAGDIKQLSEMVERGASINEVDVLHKFTPLHWAAHSGSLECLHWLLWHGADITQVTTRGWTAAHIAAIRGQDACMQALIINGANLATQDDRGCTPVHLAATHGHSFTLQVMLRSGVDPSVTDKREWKSVHYAAFHGRLGCLQLLIKWGCGIEDVDYNGNLPVHLAAMEGHLHCFKFLLSRMSNGIQALKAFNDNGENVLDLAQRFFKQNILQFIQGAAWEGNNPEDQEILAFPGHVAAFKGDLEMLKKLLEEGIISFNERDDNGSTPMHKAAEQGHIECLQWLINMGADNNITNKAGERPSDVAKRFAHLAAVKLLEGVQKYDIDDENEIDENDMKFFVRHGVEGSTDAKEDLCLSESDKTDARMRAYKKIVELRHSLEIAESNYKHLGGITEEDLKQKKEQLESEKIIKELQGQLEYERLRREKLECQLDEYRAEVDDLRETIKKIQVPNLVATEDDSGESSKEKRQVKKKLSSGGVFIRRF