Details from NCBI annotation

Gene Symbol Picalm
Gene Name phosphatidylinositol binding clathrin assembly protein, transcript variant X7
Entrez Gene ID 101706016

Database interlinks

Part of NW_004624845.1 (Scaffold)

For more information consult the page for NW_004624845.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PICALM ENSCPOG00000020758 (Guinea pig)

Gene Details

phosphatidylinositol binding clathrin assembly protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000021228, Guinea pig)

Protein Percentage 99.22%
CDS Percentage 97.3%
Ka/Ks Ratio 0.03503 (Ka = 0.0036, Ks = 0.1025)

PICALM ENSG00000073921 (Human)

Gene Details

phosphatidylinositol binding clathrin assembly protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000377015, Human)

Protein Percentage 98.14%
CDS Percentage 95.3%
Ka/Ks Ratio 0.06144 (Ka = 0.0108, Ks = 0.176)

Picalm ENSMUSG00000039361 (Mouse)

Gene Details

phosphatidylinositol binding clathrin assembly protein

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000051092, Mouse)

Protein Percentage 96.9%
CDS Percentage 93.85%
Ka/Ks Ratio 0.07838 (Ka = 0.0175, Ks = 0.2232)

Picalm ENSRNOG00000018322 (Rat)

Gene Details

phosphatidylinositol binding clathrin assembly protein

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000025415, Rat)

Protein Percentage 96.98%
CDS Percentage 93.97%
Ka/Ks Ratio 0.07534 (Ka = 0.0165, Ks = 0.2188)

Genome Location

Sequence Coding sequence

Length: 2016 bp    Location: 3891522..3987620   Strand: +
>XM_004868238.1
ATGTCTGGCCAGAGCCTGACGGACCGAATCACCGCTGCCCAGCACAGTGTCACCGGCTCCGCGGTATCCAAGACAGTATGCAAGGCCACGACCCACGAGATCATGGGCCCCAAGAAAAAGCACCTGGACTACTTAATTCAGTGCACAAATGAGATGAATGTGAACATCCCACAGTTGGCAGACAGTTTATTTGAACGAACTACAAACAGTAGTTGGGTGGTGGTCTTCAAATCTCTCATTACAACTCATCATTTGATGGTGTATGGAAATGAGCGTTTTATTCAGTATTTGGCTTCAAGAAACACATTGTTTAACTTAAGCAATTTTTTGGATAAAAGTGGATTACAAGGATATGACATGTCTACATTTATTAGGCGGTATAGTAGATATTTAAATGAAAAAGCAGTTTCATACAGACAAGTTGCATTTGATTTCACGAAAGTGAAGAGAGGGGCTGATGGTGTTATGAGAACAATGAACACAGAAAAACTCTTAAAAACTGTACCAATTATTCAAAATCAAATGGATGCACTTCTGGATTTTAATGTTAATAGCAATGAACTTACAAATGGGGTAATAAATGCTGCCTTCATGCTCCTGTTCAAAGATGCCATTAGACTATTTGCAGCATACAATGAAGGAATTATTAATCTGTTGGAAAAATATTTTGATATGAAAAAGAACCAGTGCAAAGAAGGTCTTGACATCTATAAGAAGTTCTTGACTAGGATGACAAGAATCTCAGAGTTTCTCAAAGTTGCAGAGCAAGTTGGAATTGATAGAGGTGACATACCAGACCTTTCACAGGCACCCAGCAGTCTTCTTGATGCTTTGGAACAACATTTAGCTTCCTTGGAAGGAAAGAAAATCAAAGATTCTACAGCAGCAAGCAGGGCTACAACGCTTTCCAATGCAGTCTCTTCCCTGGCAAGCACTGGCCTGTCTCTGACCAAAGTGGATGAAAGGGAAAAGCAGGCAGCATTAGAGGAAGAACAAGCTCGTTTAAAAGCTTTAAAGGAACAACGCCTAAAGGAACTTGCAAAGAAACCTCATACCTCTTTAACAACTGCAGCCTCTCCTGTGTCCAGCTCAGCTGGGGGGATAATGACTGCACCAGCCATTGACATATTTTCTACCCCTAGTTCTTCTAACAGCTCATCAAAGCTGCCAAATGACCTGCTTGATTTACAGCAGCCAACTTTTCATCCATCTGTACATCCTATGTCAACTGCTTCTCAGGTAGCAAGTACATGGGGAGATGCTGTTGATGATGCCATTCCAAGCTTAAATCCTTTCCTCACAAAAAATAGTGGTGATGTTCACCTTCCCATTTCTTCAGATGTATCCACTTTTACTACTAGGACACCTACTCATGAAATGTTTGTTGGATTCACTCCTTCTCCAGTTGCACAGCCGCATCCCTCAGCTGGCCTTAATGTTGACTTTGAATCTGTGTTTGGAAATAAGTCTACGAATGTTATTGTAGATTCCGGGGGCTTTGATGAACTAGGTGGACTTCTCAAACCAACAGTGACCTCTCAGAACCAGAGTCTTCCTGTTGCCAAACTCCCACCTAACAAGTTAGTATCTGATGACTTGGATTCATCTTTAGCCAATCTTGTGGGCAATCTTGGCATTGGAAATGGAACCACAAAGAATGATGTAAATTGGAGTCAGCCAGGTGAAAAGAAGTTAACTGGAGGATCTAACTGGCAGCCAAAGGTTGCACCAACAACTGCTTGGAATGCTGCAACAATGGCACCACCTGTAATGGCCTATCCTGCTACTACACCAACAGGCATGCTAGGATATGGAATTCCTCCTCAAATGGGAAGTGTACCTGTAATGACACAGCCAACCTTAATATACAGTCAACCTGTCATGAGGCCACCAAATCCCTTTGGTCCTGTATCAGGAGCACAGCTGTCGGCAGCATCCAGCCCCTCCAGTCACAGTCCTCACAGAACTTCAGGAAAGGACCCTTTTGCAGAGCTCTCTTTGGAGGATTTCTTATAA

Related Sequences

XP_004868295.1 Protein

Picalm PREDICTED: phosphatidylinositol-binding clathrin assembly protein isoform X7 [Heterocephalus glaber]

Length: 671 aa      View alignments
>XP_004868295.1
MSGQSLTDRITAAQHSVTGSAVSKTVCKATTHEIMGPKKKHLDYLIQCTNEMNVNIPQLADSLFERTTNSSWVVVFKSLITTHHLMVYGNERFIQYLASRNTLFNLSNFLDKSGLQGYDMSTFIRRYSRYLNEKAVSYRQVAFDFTKVKRGADGVMRTMNTEKLLKTVPIIQNQMDALLDFNVNSNELTNGVINAAFMLLFKDAIRLFAAYNEGIINLLEKYFDMKKNQCKEGLDIYKKFLTRMTRISEFLKVAEQVGIDRGDIPDLSQAPSSLLDALEQHLASLEGKKIKDSTAASRATTLSNAVSSLASTGLSLTKVDEREKQAALEEEQARLKALKEQRLKELAKKPHTSLTTAASPVSSSAGGIMTAPAIDIFSTPSSSNSSSKLPNDLLDLQQPTFHPSVHPMSTASQVASTWGDAVDDAIPSLNPFLTKNSGDVHLPISSDVSTFTTRTPTHEMFVGFTPSPVAQPHPSAGLNVDFESVFGNKSTNVIVDSGGFDELGGLLKPTVTSQNQSLPVAKLPPNKLVSDDLDSSLANLVGNLGIGNGTTKNDVNWSQPGEKKLTGGSNWQPKVAPTTAWNAATMAPPVMAYPATTPTGMLGYGIPPQMGSVPVMTQPTLIYSQPVMRPPNPFGPVSGAQLSAASSPSSHSPHRTSGKDPFAELSLEDFL