Details from NCBI annotation

Gene Symbol Ctsc
Gene Name cathepsin C, transcript variant X1
Entrez Gene ID 101697606

Database interlinks

Part of NW_004624845.1 (Scaffold)

For more information consult the page for NW_004624845.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CTSC ENSCPOG00000014848 (Guinea pig)

Gene Details

cathepsin C

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013378, Guinea pig)

Protein Percentage 85.71%
CDS Percentage 88.89%
Ka/Ks Ratio 0.30484 (Ka = 0.08, Ks = 0.2624)

CTSC ENSG00000109861 (Human)

Gene Details

cathepsin C

External Links

Gene Match (Ensembl Protein ID: ENSP00000227266, Human)

Protein Percentage 84.63%
CDS Percentage 86.8%
Ka/Ks Ratio 0.24618 (Ka = 0.0887, Ks = 0.3601)

Ctsc ENSMUSG00000030560 (Mouse)

Gene Details

cathepsin C

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000032779, Mouse)

Protein Percentage 77.87%
CDS Percentage 81.56%
Ka/Ks Ratio 0.21236 (Ka = 0.1263, Ks = 0.5949)

Ctsc ENSRNOG00000016496 (Rat)

Gene Details

cathepsin C (Ctsc), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022342, Rat)

Protein Percentage 78.52%
CDS Percentage 81.92%
Ka/Ks Ratio 0.22139 (Ka = 0.1259, Ks = 0.5685)

Genome Location

Sequence Coding sequence

Length: 1389 bp    Location: 1783816..1816140   Strand: +
>XM_004868209.1
ATGGGTCTTCGGCCGCACTCGCTGCTCGCCGCCCTCCTGCTGCTCCTGCTAGGACTCCGCGGCGTGCGCTGCGATACGCCGGCCAACTGCACCTACCCGGACCTGCTGGGCACCTGGGTCTTCCAGGTGGGCCCCGGCGGCTCCGGGCGCGACGTCAACTGCTCGGCCATGGAACCACCAGAAAAAAAAGTAGCGGTGCACCTTAAGAAGATGGATACAGCCTATGATGACTTTGGCAATACTGGATATTTCACCATTATTTATAACCAAGGCTTCGAGATTGTGCTGAATGACTACAAGTGGTTTGCCTTCTTTAAGTATGAAACCAAGGGCAGCAAGGTAATCAGTTACTGCCAGGAGACAATGACTGGGTGGGTACATGATGTACTGGGCCGGAACTGGGCTTGTTTCGTTGGAAAGAAGGTGGAAAGTCCTGAAAATGTGAATGTGAACACAGCATACCTTGAAAGTCACCTGGAAAAATATTCTAATAGGCTCTACAAATATGATCACAAATTTGTGAAGGCTATCAATGCTGTCCAGAAGTCTTGGACTGCAACTACATACAAGGAATATGAGACTCTTACCTTGAGAGAAATGGCTAGGAGACGTGGTGGACACAATCAGATAATCCCAAGGCCCAAACCTGCACCCCTGAGTGCTGAAATACAGCAAAAGATTTTACAGTTGCCAAAATCTTGGGACTGGAGAGATGTTCATGGTATGAATTTTGTTAGCCCTGTTCGAAACCAAGGATATTGTGGAAGCTGCTATTCATTTGCTTCTATGGGTATGTTAGAAGCAAGAATCCGAATATTAACTAACAACACTCAGACTCCAATCTTGAGTCCTCAGGAGGTTGTGTCTTGTAGCCAGTATGCTCAAGGTTGTGAAGGTGGTTTCCCCTACCTCATCGCAGGAAAGTATGCCCAAGATTTTGGGTTTGTGGAAGAATCCTGCTTCCCTTACACAGGCACTGATGCTCCTTGCAAAATGAAAGAGGACTGTATGCGTTACTATACCTCTGAGTACCACTACGTGGGAGGTTTCTATGGGGGCTGCAATGAAGCCCTGATGAAGCTGGAGCTGGTCCAGCATGGACCTATGGCAGTTGCTTTTGAAGTCTGTGATGATTTTATGCACTACCACAAAGGGATCTACCATCACACTGGGCTGAGAGACCCTTTCAACCCCTTTGAGCTGACAAATCACGCTGTTCTGCTCGTGGGCTATGGCACTGATTCAGCCAATGGGATGGATTACTGGATTGTGAAAAACAGCTGGGGTACAAGCTGGGGTGAGAAAGGATACTTTCGGATCCTCAGAGGCACTGATGAGTGTGCAATCGAAAGCATAGCAATGGCAGCCACACCAATTCCTAAATTGTAG

Related Sequences

XP_004868266.1 Protein

Ctsc PREDICTED: dipeptidyl peptidase 1 isoform X1 [Heterocephalus glaber]

Length: 462 aa      View alignments
>XP_004868266.1
MGLRPHSLLAALLLLLLGLRGVRCDTPANCTYPDLLGTWVFQVGPGGSGRDVNCSAMEPPEKKVAVHLKKMDTAYDDFGNTGYFTIIYNQGFEIVLNDYKWFAFFKYETKGSKVISYCQETMTGWVHDVLGRNWACFVGKKVESPENVNVNTAYLESHLEKYSNRLYKYDHKFVKAINAVQKSWTATTYKEYETLTLREMARRRGGHNQIIPRPKPAPLSAEIQQKILQLPKSWDWRDVHGMNFVSPVRNQGYCGSCYSFASMGMLEARIRILTNNTQTPILSPQEVVSCSQYAQGCEGGFPYLIAGKYAQDFGFVEESCFPYTGTDAPCKMKEDCMRYYTSEYHYVGGFYGGCNEALMKLELVQHGPMAVAFEVCDDFMHYHKGIYHHTGLRDPFNPFELTNHAVLLVGYGTDSANGMDYWIVKNSWGTSWGEKGYFRILRGTDECAIESIAMAATPIPKL