Details from NCBI annotation

Gene Symbol Chordc1
Gene Name cysteine and histidine-rich domain (CHORD) containing 1, transcript variant X1
Entrez Gene ID 101722059

Database interlinks

Part of NW_004624845.1 (Scaffold)

For more information consult the page for NW_004624845.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CHORDC1 ENSCPOG00000022614 (Guinea pig)

Gene Details

cysteine and histidine-rich domain (CHORD) containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000018412, Guinea pig)

Protein Percentage 97.59%
CDS Percentage 95.28%
Ka/Ks Ratio 0.04821 (Ka = 0.0104, Ks = 0.2149)

CHORDC1 ENSG00000110172 (Human)

Gene Details

cysteine and histidine-rich domain (CHORD) containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000319255, Human)

Protein Percentage 94.88%
CDS Percentage 91.87%
Ka/Ks Ratio 0.06232 (Ka = 0.0229, Ks = 0.3668)

Chordc1 ENSMUSG00000001774 (Mouse)

Gene Details

cysteine and histidine-rich domain (CHORD)-containing, zinc-binding protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000001825, Mouse)

Protein Percentage 95.77%
CDS Percentage 88.72%
Ka/Ks Ratio 0.02858 (Ka = 0.0191, Ks = 0.6677)

Chordc1 ENSRNOG00000026643 (Rat)

Gene Details

cysteine and histidine-rich domain (CHORD)-containing 1 (Chordc1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000030171, Rat)

Protein Percentage 95.77%
CDS Percentage 89.22%
Ka/Ks Ratio 0.02884 (Ka = 0.0187, Ks = 0.6484)

Genome Location

Sequence Coding sequence

Length: 999 bp    Location: 225878..243501   Strand: +
>XM_004868189.1
ATGGCCCTACTATGCTACAACCGGGGCTGCGGTCAGCGCTTCGATCCCGAGACCAATTCCGATGATGCTTGTACATACCATCCAGGTGTTCCAGTCTTTCATGATGCCTTAAAGGGTTGGTCTTGCTGTAAAAGAAGAACAACTGATTTTTCTGACTTCTTAAGTATTGTAGGCTGTACAAAAGGTAGACATAATAGTGAGAAACCACCCGAGCCAGTCAAGCCAGAAGTCAAAACTACTGAGAAGAAAGAACTATCTGAATTAAAACCCAGGTTTCAGGAACATATCATTCAAGCACCAAAACCAGTAGAAGCAATAAAAAGACCAAGCCCAGATGAACCAATGACGAGTTTGGAATTAAAAATATCTGCCTCCCTAAAACAAGCACTTGATAAACTTAAACTGTCTTCAGGAAATGAAGAAAATAAGAAAGAAGAAGACAGTGATGAGATTAAGATTGGGACCTCATGTAAAAATGGAGGATGTTCGAAGACATATCAGGGTCTACAGAGTCTAGAAGAAGTCTGCGTATACCATTCTGGCGTACCTATTTTCCATGAGGGGATGAAATATTGGAGTTGTTGCAGAAGAAAAACCTCTGATTTTAATACGTTCTTAGCCCAAGAGGGCTGTACAACCGGGAAACACATGTGGACTGAAAAGGATTCTGGGAAAAAAGTTGTTCCATGTAGACATGACTGGCATCAGACTGGGGGCGAAGTCACCATTTCAGTGTATGCTAAAAATTCACTTCCTGATCTTAGTCGAGTAGAAGCAAATAGTACTTCATTAAATGTGCACATTGTATTTGAAGGAGAGAAACAATTTCATCAAAACGTGAAATTATGGGGTGTGATTGATGTAAAGCGAAGTTATGTAACGATGACTGCTACAAAGATTGAAATCACCATGAGAAAAGCTGAACCTATGCAGTGGGCAAGCCTTGAACTGCCTACAACCAAAAAACAGGAAAAACAAAAAGAAGATATCACAGATTGA

Related Sequences

XP_004868246.1 Protein

Chordc1 PREDICTED: cysteine and histidine-rich domain-containing protein 1 isoform X1 [Heterocephalus glaber]

Length: 332 aa      View alignments
>XP_004868246.1
MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCKRRTTDFSDFLSIVGCTKGRHNSEKPPEPVKPEVKTTEKKELSELKPRFQEHIIQAPKPVEAIKRPSPDEPMTSLELKISASLKQALDKLKLSSGNEENKKEEDSDEIKIGTSCKNGGCSKTYQGLQSLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTTGKHMWTEKDSGKKVVPCRHDWHQTGGEVTISVYAKNSLPDLSRVEANSTSLNVHIVFEGEKQFHQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPTTKKQEKQKEDITD