Details from NCBI annotation

Gene Symbol unclassified transcription discrepancy
Gene Name mRNA
Entrez Gene ID 101725789

Database interlinks

Part of NW_004624843.1 (Scaffold)

For more information consult the page for NW_004624843.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SP140 ENSCPOG00000010544 (Guinea pig)

Gene Details

SP140 nuclear body protein

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009466, Guinea pig)

Protein Percentage 60.93%
CDS Percentage 73.18%
Ka/Ks Ratio 0.60465 (Ka = 0.3032, Ks = 0.5015)

SP140 ENSG00000079263 (Human)

Gene Details

SP140 nuclear body protein

External Links

Gene Match (Ensembl Protein ID: ENSP00000375899, Human)

Protein Percentage 58.82%
CDS Percentage 70.47%
Ka/Ks Ratio 0.51223 (Ka = 0.3308, Ks = 0.6459)

Sp140 ENSRNOG00000022800 (Rat)

Gene Details

nuclear body protein SP140

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000031057, Rat)

Protein Percentage 50.28%
CDS Percentage 64.15%
Ka/Ks Ratio 0.39741 (Ka = 0.4109, Ks = 1.034)

Genome Location

Sequence Coding sequence

Length: 1710 bp    Location: 3918468..3975973   Strand: +
>XM_004868125.1
ATGACCATATTCAGATTTTATTATGTAAAGGATCCTACAAATGAATCAGCAAAAGCTGCCCACGCGGACCCCTGGGCAGCGGCAAGGAAGCAGCCACAGGCTGTGGGCAGCGTGCAGAGCCAGAGCTTACAGCGGGTAGAGTCAGATCTTGGTGCCAATAAGGACGGCAAGAAGCTCATTTTCAAGCGTTTCAGAGAAAACAAGGTAGAGATTGCAAGTGCGATAACGAAGCCATTTCCTTTCCTTATGAGCCTCTGGGACCTTGCCTTCATCTCCGAGCAGATGTATAAACATTTTCAAGAAACTTGTAGAAACCTGGTGCCAGTGACGAGAGTGGTGTACGAAGTCCTCCATGAACTGGAGAAGACATTCACCTCATCACTTCTGCAAGTGTTGTTCAGCAAAGCCAACCTGAAGGCCTATCCTGATTTAAATGAGATTCTCAGAAGCTTCCCAAGTGGTAACTATATGCCCTGGGAAATCACTGTACAAATAGATGAAGGAAGAGAATCAGAAGAAAGGCCCAGGTTATTACCTTACAATGGAGATGAGACTTCTGCTCCACAAACTCCCCAGATGACTAACAGAGAAGCAGAAAAGGTGCTCAGCCTCCCACCAGGTGAGGGAGTGGAGGACAGCAATAATGGTGTGGAGATGTCTGAGTCAGAGGAGCCCCAAGAAACCTCAAGCTCACTTGCAAGATGTGAGCCAGTGTCCTGTGATCCTGAAGCTCCCCAGATGAATGGAGAAGCAGCAGAGGAGGCTCCCAGCCAAGAACCATGTGACAACCAAGAAGAAGCGGAGCAATCAGCACATGAAATTGAGAAGTGTTCCTGTGTCATGTGTTGGCCAAGAGTTTCAGAAGGCTCAGAAGCAAGGACAGATAGTGGCCAAGCACGTGACACACCAGATACTGCAGATATGGGAAACAATCTTACTTTAGGAAAACCCAAGAGGAAAAAAATGGAAACATTCCATGCTCTCGTTTCCCCTCAGAAGCAAGTGTTGGAGGCAGAGCTCTATACCATTGGATCTCTAGAGACAGAGCTTGAAGTGGGCATGGGCAGAGCCGGCCTGCAGATGATGGGAAACAAGGGTGGGGACTTGGTCTTCAACCCCGGGCACTCGCTATGCCTACACACCCTGGACCTGAGGAACTCAAATGAATGTGAGGTGTGCAGGGATGGGGGGACACTGTTCTGCTGCAACACTTGCTCCAGACCTTCCATGACTACTGTCGCCTTCCATGACTACTGTCACCTCCCACCTGTGGAAGCTGAGAGCAACCTGTGGAGTTGCATCTTCTGCAGGATGGAGTCCTTCAGAAGCCAACAGTGTTATCAGGAATCTGAGATCCTGGAGAGGCAGATGCAGGCTGAGGAACAGTTAAAATGTGAGTTTCTCCTCTTGAAAGTCTACTGCTGTTCTGAGAGCTCCTTTTTTGCCAAAATTCCATATCATTATTGGGTTAAGGAGACTTCTGAAGTTCCAAAGGAACTCATGTGGTTGGACAAGATAAGGNGAAAGTTAAATAAGAAGAATTACGCCCAAGTGGAAGGGTTTGTGCAGGACATGAGCCTCATTTTCCAGAACCGCAGGACCTCGTACAAGTACCATGAGTTTAGCCAAATGGGACTCAGACTGGAGGCTGAATTTGAGAAGAACATCAGGGAAGTGTTTGTTATTCAGGAAACAGATGAGAACAGTTGA

Related Sequences

XP_004868182.1 Protein

unclassified transcription discrepancy PREDICTED: LOW QUALITY PROTEIN: nuclear body protein SP140 [Heterocephalus glaber]

Length: 569 aa     
>XP_004868182.1
MTIFRFYYVKDPTNESAKAAHADPWAAARKQPQAVGSVQSQSLQRVESDLGANKDGKKLIFKRFRENKVEIASAITKPFPFLMSLWDLAFISEQMYKHFQETCRNLVPVTRVVYEVLHELEKTFTSSLLQVLFSKANLKAYPDLNEILRSFPSGNYMPWEITVQIDEGRESEERPRLLPYNGDETSAPQTPQMTNREAEKVLSLPPGEGVEDSNNGVEMSESEEPQETSSSLARCEPVSCDPEAPQMNGEAAEEAPSQEPCDNQEEAEQSAHEIEKCSCVMCWPRVSEGSEARTDSGQARDTPDTADMGNNLTLGKPKRKKMETFHALVSPQKQVLEAELYTIGSLETELEVGMGRAGLQMMGNKGGDLVFNPGHSLCLHTLDLRNSNECEVCRDGGTLFCCNTCSRPSMTTVAFHDYCHLPPVEAESNLWSCIFCRMESFRSQQCYQESEILERQMQAEEQLKCEFLLLKVYCCSESSFFAKIPYHYWVKETSEVPKELMWLDKIRXKLNKKNYAQVEGFVQDMSLIFQNRRTSYKYHEFSQMGLRLEAEFEKNIREVFVIQETDENS