Details from NCBI annotation

Gene Symbol Atg16l1
Gene Name autophagy related 16-like 1 (S. cerevisiae), transcript variant X7
Entrez Gene ID 101715799

Database interlinks

Part of NW_004624843.1 (Scaffold)

For more information consult the page for NW_004624843.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

ATG16L1 ENSCPOG00000011372 (Guinea pig)

Gene Details

autophagy related 16-like 1 (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000010222, Guinea pig)

Protein Percentage 95.75%
CDS Percentage 91.55%
Ka/Ks Ratio 0.06497 (Ka = 0.0226, Ks = 0.3481)

ATG16L1 ENSG00000085978 (Human)

Gene Details

autophagy related 16-like 1 (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSP00000375872, Human)

Protein Percentage 94.22%
CDS Percentage 88.44%
Ka/Ks Ratio 0.06999 (Ka = 0.0326, Ks = 0.4662)

Atg16l1 ENSMUSG00000026289 (Mouse)

Gene Details

autophagy related 16-like 1 (S. cerevisiae)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000108815, Mouse)

Protein Percentage 94.73%
CDS Percentage 87.3%
Ka/Ks Ratio 0.04905 (Ka = 0.0287, Ks = 0.5844)

Atg16l1 ENSRNOG00000017913 (Rat)

Gene Details

autophagy related 16-like 1 (S. cerevisiae) (Atg16l1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024445, Rat)

Protein Percentage 94.39%
CDS Percentage 87.19%
Ka/Ks Ratio 0.04975 (Ka = 0.0295, Ks = 0.5929)

Genome Location

Sequence Coding sequence

Length: 1827 bp    Location: 5805069..5838741   Strand: +
>XM_004868105.1
ATGTCGTCGAGCCTCCGCGCTGCCGACTTCCCTCGCTGGAAACGCCACATTGCTGAGGAGCTGAGGCGCCGCGATCGGCTGCAGAGGCAGGCGTTCGAGGAGATCATCCTGCAGTATAACAAGTTGCTGGAAAAGTCAGATCTTCATTCAGTGTTGGCCCAGAAACTACAAGCTGAAAAGCATGATGTACCAAACCGGCATGAAATAAGTCCTGGACATGATGGCACATGGAATGACAGTCAGCTACAGGAAATGGCCCAGCTGAGGATTAAACACCAGGAAGAACTCACTGAATTACACAAGAAACGTGGGGAGTTAGCTCAGTTGGTGATCGACCTGAATAACCAGATGCAGCAGAAGGACAGGGAGATACAGATGAATGAAGCAAAAATCGCGGAATGTTTGCAGACCGTCTCTGACCTGGAGACAGAGTGCCTGGACCTGCGCTGCAAGCTCCAGGACCTCGAGATCGCCAACCAGACCTTGAAGGACGAATATGACGCCCTGCAAATCACCTTCACCGCCTTGGAGGAGAAATTGAGGAAAACTACTGAGGAGAACCAGGAGCTGGTCAACAGGTGGATGGCCGAGAAGGCCCAGGAGGCCAACCGCCTTAATGCTGAGAACGAAAAGGACTCCAGGCGGCGGCAAGCGCGACTACAGAAGGAGCTCGCGGAAGCAGCGAAGGAGCCTCTGCCAGTAGAACAGGATGACGACATTGAAGTCATCGTGGATGAGACCTCTGATCACACAGAGGAGACCTCTCCTGTGCGAGGCATCAGCAGAGCCGCCTCGAGACGCTCTGTCTCTTCCTTCCCAGTCCCCCAGGAGGTACCTGTGGATGCTCATCCTAGTCCTGGTAAAGACGTGAGAGTGCCGACTACTGCCCTGTGTGTCTTCGATGCACACGATGGGGAAGTCAATGCCGTGCAGTTTAGTCCCGGCTCCCGGCTGCTGGCCACAGGAGGCATGGACCGGCGGGTCAAGCTGTGGGAAGTATTTGGAGACAAATGTGAGTTCAAGGGTGCCCTATCTGGCAGTAATGCTGGAATTACAAGCATCGAATTTGATAGTGCCGGAGCTTACCTCTTAGCAGCTTCAAATGACTTTGCAAGCCGAATCTGGACTGTGGATGACTATCGATTACGGACTGGCTGTGAGGATGGGGCTCACCAGAGGCTCACCATGCCGCCTTCTCTCTCCCAGCACACACTCACAGGCCACAGTGGGAAAGTGCTGTCTGCCAAGTTCCTGCTGGACAATGCACGGATCGTCTCGGGAAGTCATGACCGGACCCTCAAACTCTGGGACCTGCGCAGCAAAGTCTGCATAAAGACGGTGTTTGCAGGATCCAGTTGCAATGATATTGTCTGCACAGAGCAATGTGTGATGAGCGGGCATTTTGACAAGAAAATTCGTTTCTGGGACATCCGATCAGAGAGTGTGGTCCGGGAGATGGAGCTGCTGGGGAAGATCACCGCCCTGGACCTGAACCCGGAGCGGACTGAGCTGCTGAGCTGCTCCCGGGACGACCTGCTGAAAGTCATCGATCTTCGGACGAGCACCGTGAAGCAGACCTTCAGTGCACCCGGCTTCAAGTGCGGCTCAGACTGGACCAGAGTGGTCTTCAGCCCTGACGGCAGTTACGTGGCAGCAGGCTCAGCCGAGGGTTCGCTGTATGTCTGGAGCGTGCTCACAGGGAAAGTGGAGAAGACACTGTCAAAGCAGCACAGCTCCTCCATCAACGCGGTGGCGTGGGCCCCCTCCGGCCTGCACGTCGTCAGCGTGGACAAAGGCAGCAAAGCTGTGCTGTGGGCACAGCCATGA

Related Sequences

XP_004868162.1 Protein

Atg16l1 PREDICTED: autophagy-related protein 16-1 isoform X7 [Heterocephalus glaber]

Length: 608 aa      View alignments
>XP_004868162.1
MSSSLRAADFPRWKRHIAEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAQKLQAEKHDVPNRHEISPGHDGTWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQKDREIQMNEAKIAECLQTVSDLETECLDLRCKLQDLEIANQTLKDEYDALQITFTALEEKLRKTTEENQELVNRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDIEVIVDETSDHTEETSPVRGISRAASRRSVSSFPVPQEVPVDAHPSPGKDVRVPTTALCVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKGALSGSNAGITSIEFDSAGAYLLAASNDFASRIWTVDDYRLRTGCEDGAHQRLTMPPSLSQHTLTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSESVVREMELLGKITALDLNPERTELLSCSRDDLLKVIDLRTSTVKQTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYVWSVLTGKVEKTLSKQHSSSINAVAWAPSGLHVVSVDKGSKAVLWAQP