Details from NCBI annotation

Gene Symbol Psmd1
Gene Name proteasome (prosome, macropain) 26S subunit, non-ATPase, 1, transcript variant X2
Entrez Gene ID 101699553

Database interlinks

Part of NW_004624843.1 (Scaffold)

For more information consult the page for NW_004624843.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PSMD1 ENSCPOG00000000431 (Guinea pig)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000381, Guinea pig)

Protein Percentage 99.05%
CDS Percentage 93.92%
Ka/Ks Ratio 0.01709 (Ka = 0.0044, Ks = 0.2582)

PSMD1 ENSG00000173692 (Human)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000309474, Human)

Protein Percentage 98.43%
CDS Percentage 92.2%
Ka/Ks Ratio 0.02207 (Ka = 0.0078, Ks = 0.3525)

Psmd1 ENSRNOG00000017730 (Rat)

Gene Details

proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 (Psmd1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000024306, Rat)

Protein Percentage 98.11%
CDS Percentage 89.75%
Ka/Ks Ratio 0.01886 (Ka = 0.0097, Ks = 0.5157)

Genome Location

Sequence Coding sequence

Length: 2862 bp    Location: 4369588..4469235   Strand: +
>XM_004868048.1
ATGATCACCTCAGCCGCTGGAATTATTTCTCTTCTGGATGAAGAAGAACCGCAGCTTAAGGAATTTGCACTACACAAATTGAATGCAGTTGTCAATGACTTCTGGGCAGAAATTTCTGAGTCTGTAGACAAAATAGAAGTTTTGTATGAAGATGAAGGTTTCCGAAGTCGGCAGTTTGCAGCCTTAGTGGCATCTAAAGTGTTTTATCACCTGGGAGCCTTTGAGGAATCTCTGAATTATGCTCTTGGAGCTGGTGACCTCTTCAATGTCAATGATAACTCTGAATACGTGGAGACTATTATAGCAAAATGTATTGATCACTATACCAAACAGTGTGTGGAGAATGCAGATTTGCCTGAAGGAGAAAAAAAACCAATTGACCAGAGATTGGAAGGCATTGTGAATAAAATGTTCCAAAGATGTCTAGATGATCACAAGTATAAACAAGCTATCGGCATCGCTTTAGAGACACGAAGACTAGATGTCTTTGAGAAGACCATACTGGAATCGAATGATGTCCCGGGAATGCTAGCTTATAGCCTAAAGCTCTGCATGTCTTTAATGCAGAATAAACAGTTCCGGAATAAAGTGCTAAGAGTTCTTGTTAAAATCTATATGAACTTGGAAAAACCTGATTTCATCAATGTTTGTCAGTGCTTAATATTCTTAGATGATCCTCAGGCTGTGAGTGACATCTTAGAAAAACTGGTGAAGGAAGACAACCTCCTGATGGCTTATCAGATCTGTTTTGATTTGTATGAAAGTGCCAGCCAGCAGTTTCTGTCCTCTGTGATCCAGAATCTTGGAACTGTGGGCACGCCCATTGCTTCTGTGCCTGGCTCCACCAACACAGGCACTGTTCCAGGATCTGAAAAAGACAATGAAATGATGGAAACAGAAGACAAGACAGGCAATACACTTGTTGGAAAGGCACCAGACACAAGTCCAGAGCCCAAGGACCAGACATTGAAAATGATTAAAATTTTAAGTGGTGAAATGGCTATCGAGTTACATCTGCAGTTCCTAATACGAAATAATAACACAGACCTCATGATTCTAAAAAACACAAAGGATGCAGTACGGAATTCTGTATGTCACACTGCAACTGTCATAGCAAACTCTTTTATGCACTGTGGGACTACCAGTGACCAGTTTCTTAGAGATAACTTGGAATGGTTGGCCAGAGCCACTAACTGGGCAAAATTTACTGCTACAGCCAGTTTGGGTGTAATTCATAAGGGTCACGAGAAGGAAGCATTGCAGTTAATGGCAACCTACCTTCCCAAAGACACATCTCCAGGGTCAGCCTACCAGGAAGGTGGGGGCCTCTACGCACTGGGGCTCATTCATGCCAATCACGGTGGTGACATCATCGATTATCTGCTGAATCAGCTCAAGAATGCCAGCAATGACATTGTTCGGCACGGAGGCAGCCTGGGCCTTGGTTTGGCTGCTATGGGAACTGCGCGCCAGGATGTGTATGATTTGCTGAAAACAAACCTTTATCAGGATGATGCTGTGACCGGAGAAGCAGCTGGCCTGGCCCTAGGTTTGGTTATGTTAGGTTCTAAAAATGCACAGGCTATTGAGGACATGGTCGGCTATGCACAAGAAACTCAGCATGAGAAGATCCTACGTGGTCTCGCTGTTGGCATTGCCTTAGTGATGTACGGGAGGATGGAAGAGGCTGACGCTCTCATCGAATCTCTCTGTCGGGATAAGGACCCAATTCTTCGAAGGTCTGGAATGTATACTGTGGCCATGGCTTACTGTGGCTCTGGTAACAACAAAGCTATTCGACGCTTGCTACATGTTGCCGTCAGTGATGTTAATGATGATGTGAGGAGGGCAGCAGTCGAATCACTTGGCTTCATTCTATTCAGGACCCCTGAACAGTGCCCCAGTGTAGTTTCTTTGTTGTCAGAGAGTTACAACCCTCATGTGCGCTACGGAGCAGCCATGGCCCTGGGGATCTGTTGTGCTGGGACAGGAAACAAGGAAGCTATAAATTTGCTAGAACCAATGACGAATGACCCTGTGAACTACGTGAGGCAAGGGGCTCTCATTGCTTCAGCTCTCATCATGATCCAGCAGACTGAAGTCACTTGTCCAAAGGTGAATCAGTTCAGACAGCTGTATTCCAAAGTCATCAATGATAAGCATGATGATGTCATGGCCAAGTTTGGCGCTATTCTGGCCCAGGGCATACTAGATGCAGGTGGCCATAATGTCACAATCTCCTTACAGTCCAGAACTGGGCACACTCATATGCCTTCTGTGGTTGGCGTCCTTGTCTTTACCCAGTTCTGGTTCTGGTTTCCTCTCTCACATTTCCTGTCATTGGCTTATACCCCTACCTGCGTCATTGGCCTTAACAAGGACTTAAAGATGCCGAAGGTTCAGTATAAATCGAACTGTAAACCATCCACATTTGCATACCCTGCCCCTCTGGAAGTACCTAAAGAAAAGGAAAAGGAAAAGGTTTCCACTGCTGTGTTATCTATTACTGCCAAGGCTAAAAAGAAGGAAAAAGAAAAAGAAAAAAAGGAGGAAGAGAAAATGGAAGTGGATGAAACAGAGAAAAAAGAAGAAAAAGAGAAGAAAAAGGAGCCGGAACCAAACTTTCAGCTATTAGATAACCCAGCCCGAGTTATGCCTGCCCAGCTTAAGGTCCTCACCATGCCAGAGACCTGTAGATACCAGCCATTCAAACCACTCTCCATCGGAGGGATCATCATTCTGAAGGACACCAGCGAAGACATCGAGGAGCTGGTGGAACCTGTGGCAGCACATGGCCCCAAGATCGAGGAGGAGGAGCAAGAGCCAGAGCCCCCAGAGCCCTTTGAATATATTGATGATTAA

Related Sequences

XP_004868105.1 Protein

Psmd1 PREDICTED: 26S proteasome non-ATPase regulatory subunit 1 isoform X2 [Heterocephalus glaber]

Length: 953 aa     
>XP_004868105.1
MITSAAGIISLLDEEEPQLKEFALHKLNAVVNDFWAEISESVDKIEVLYEDEGFRSRQFAALVASKVFYHLGAFEESLNYALGAGDLFNVNDNSEYVETIIAKCIDHYTKQCVENADLPEGEKKPIDQRLEGIVNKMFQRCLDDHKYKQAIGIALETRRLDVFEKTILESNDVPGMLAYSLKLCMSLMQNKQFRNKVLRVLVKIYMNLEKPDFINVCQCLIFLDDPQAVSDILEKLVKEDNLLMAYQICFDLYESASQQFLSSVIQNLGTVGTPIASVPGSTNTGTVPGSEKDNEMMETEDKTGNTLVGKAPDTSPEPKDQTLKMIKILSGEMAIELHLQFLIRNNNTDLMILKNTKDAVRNSVCHTATVIANSFMHCGTTSDQFLRDNLEWLARATNWAKFTATASLGVIHKGHEKEALQLMATYLPKDTSPGSAYQEGGGLYALGLIHANHGGDIIDYLLNQLKNASNDIVRHGGSLGLGLAAMGTARQDVYDLLKTNLYQDDAVTGEAAGLALGLVMLGSKNAQAIEDMVGYAQETQHEKILRGLAVGIALVMYGRMEEADALIESLCRDKDPILRRSGMYTVAMAYCGSGNNKAIRRLLHVAVSDVNDDVRRAAVESLGFILFRTPEQCPSVVSLLSESYNPHVRYGAAMALGICCAGTGNKEAINLLEPMTNDPVNYVRQGALIASALIMIQQTEVTCPKVNQFRQLYSKVINDKHDDVMAKFGAILAQGILDAGGHNVTISLQSRTGHTHMPSVVGVLVFTQFWFWFPLSHFLSLAYTPTCVIGLNKDLKMPKVQYKSNCKPSTFAYPAPLEVPKEKEKEKVSTAVLSITAKAKKKEKEKEKKEEEKMEVDETEKKEEKEKKKEPEPNFQLLDNPARVMPAQLKVLTMPETCRYQPFKPLSIGGIIILKDTSEDIEELVEPVAAHGPKIEEEEQEPEPPEPFEYIDD