Sequence details NCBI ID: XM_004868017.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Trip12
Gene Name thyroid hormone receptor interactor 12, transcript variant X6
Entrez Gene ID 101720066

Database interlinks

Part of NW_004624843.1 (Scaffold)

For more information consult the page for NW_004624843.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TRIP12 ENSCPOG00000007990 (Guinea pig)

Gene Details

thyroid hormone receptor interactor 12

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007191, Guinea pig)

Protein Percentage 95.48%
CDS Percentage 92.85%
Ka/Ks Ratio 0.12068 (Ka = 0.0282, Ks = 0.2334)

TRIP12 ENSG00000153827 (Human)

Gene Details

thyroid hormone receptor interactor 12

External Links

Gene Match (Ensembl Protein ID: ENSP00000283943, Human)

Protein Percentage 98.34%
CDS Percentage 93.98%
Ka/Ks Ratio 0.03218 (Ka = 0.0077, Ks = 0.2403)

Trip12 ENSMUSG00000026219 (Mouse)

Gene Details

thyroid hormone receptor interactor 12

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000027421, Mouse)

Protein Percentage 97.92%
CDS Percentage 92.46%
Ka/Ks Ratio 0.0327 (Ka = 0.0102, Ks = 0.3118)

Trip12 ENSRNOG00000016963 (Rat)

Gene Details

thyroid hormone receptor interactor 12 (Trip12), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000022822, Rat)

Protein Percentage 98.12%
CDS Percentage 92.49%
Ka/Ks Ratio 0.02926 (Ka = 0.0092, Ks = 0.3149)

Genome Location

Sequence Coding sequence

Length: 6192 bp    Location: 3722190..3589925   Strand: -
Raw sequence   
>XM_004868017.1
ATGTCCAACCGGCCTAATAACAATCCAGGGGGGTCACTGCGACGTTCACAGAGGAACACTGCCGGGGCCCAACTACAAGACGACTCGATAGGAGGAAGGTCACTTTTAGGGCAGGCAAAACATAAGAGATATAGCCCTCCTGAGAGTAGAAAATCTAATTCTAAGGCACCCAAAGTGCAGTCTAATACTACTTCTGAACTGTCAAGGGGACACCTTTCTAAAAGAAGCTGCAGTACATCATCTGCTGTCACAGTTCCACAACCAGAGGATCCAGACAGAGCGAATACTTCAGAAAGGCAAAAAACGGGGCACGTGCCTAAGAAAGACAATTCTCGAGGAGTGAAACGCAGTGCTAGTCCAGACTACAACAGGACCAGTTCTCCTAGCTCTGCAAAAAAACCCAGAGCACTTCAGCATACTGAGTCTCCCTCAGAAACAAATAAGCCACATAGTAAGTCAAAGAAGAGACATTTAGACCAAGAGCAACAACTGAAATCTGCACAATCACCGTCAACAAGCAAGGCTCATAGCAGAAAGAGTGGGGCCGCTGGTAGTTCACGGAGTCAGAAAAGGAAAAGGACAGAAGGTTTTTGTGTGAAGAGTGGTTCTGGGTCTGAATCAACTGGTGCTGAAGAGAGATCTGCAAAACCTACCAAGCTGGCTTCAAAATCCGCCACCTCGGCCAAAGCTGGGTGTAGCACCATCACTGATTCTTCCTCTGCTGCCTCTACTTCCTCCTCGTCTTCTGCTGTGGCCTCGGCCTCCTCCACTGTGCCACCAGGTGCCAGGGTGAAGCAAGGAAAAGACCAGAACAAGGCCAGGCGTTCCCGTTCAGCATCCAGTCCCAGTCCCAGAAGAAGTAGCAGGGAGAAGGAACAGAGTAAAACTGGTGGCTCTTCAAAATTTGATTGGGCTGCTCGTTTCAGCCCTAAAGTTAGCCTTTCTAAAACAAAACTGTCTCTTCCAGGGTCTTCTAAGTCAGAGACATCAAAACCTGGACCTTCCGGATTACAAGCCAAATTAGCAAGTTTAAGAAAATCTACCAAGAAACGCAGTGAGTCCCCACCTGCTGAGCTCCCCAGTTTGAGGCGGAGCACACGCCAAAAGACCACGGGCTCCTGTGCTAGTACCAGTCGGCGAGGCTCTGGCCTGGGCAAAAGAGGAGCAGCTGAGGCGCGTCGACAGGAGAAAATGGCAGACCCTGAAAGCAGCCAGGAGACGGTGAATTCCTCAGCTGCCCGGACAGATGAGGCCCCCCAAGGAGCAGCAGCCTCCAGTTCTGTTGCAGGGGCTGTTGGCATGACCACCTCTGGGGAGAGTGAATCAGATGATTCTGAGATGGGACGATTACAAGCTCTGTTAGAGGCCAGGGGTCTTCCTCCTCACCTGTTTGGTCCTCTTGGTCCTCGGATGTCACAACTTTTCCATAGAACAATTGGAAGCGGAGCTAGTTCTAAGGCCCAGCAGCTTCTGCAAGGACTACAAGCCAGTGATGAAAGTCAGCAGCTTCAGGCAGTTATTGAAATGTGTCAGTTACTGGTAATGGGAAATGAGGAGACACTGGGAGGGTTCCCTGTGAAGAGTGTTGTTCCAGCTTTGATAACATTACTGCAAATGGAGCATAATTTTGATATTATGAACCATGCTTGCCGCGCCTTAACATACATGATGGAAGCACTTCCTCGGTCGTCTGCTGTCGTAGTGGATGCTATTCCTGTCTTTTTAGAGAAGCTGCAAGTTATTCAGTGTATTGATGTGGCAGAACAGGCCTTGACTGCCTTGGAGATGTTGTCACGAAGACATAGTAAAGCCATTCTACAGGCGGGTGGTTTGGCAGACTGCTTGCTGTATCTAGAATTCTTCAGCATAAATGCCCAAAGAAATGCACTAGCAATTGCAGCCAATTGCTGCCAGAGTATCACGCCAGATGAATTTCATTTTGTGGCAGATTCCCTCCCATTGCTTACCCAAAGGCTAACCCATCAGGACAAAAAGTCAGTGGAAAGCACTTGTCTTTGTTTTGCACGTCTAGTGGACAACTTCCAACATGAGGAGAATTTACTCCAGCAGGTGGCCTCTAAAGATCTCCTTACAAATGTTCAACAACTGTTGGTAGTGACTCCACCAATTTTAAGTTCTGGGATGTTTATAATGGTGGTTCGCATGTTTTCTCTGATGTGTTCCAACTGTCCAACGTTAGCCGTTCAACTTATGAAGCAAAACATCGCAGAAACGCTTCACTTCCTCCTGTGTGGTGCCTCCAATGGAAGTTGTCAGGAGCAGATCGATCTCGTCCCGCGAAGTCCTCAAGAGCTGTATGAACTGACATCTCTGATTTGTGAACTTATGCCATGTTTACCAAAAGAAGGCATTTTTGCAGTTGATACCATGTTGAAGAAGGGAAACGCGCAGAACACAGATGGTGCAATATGGCAGTGGCGCGACGACCGGGGCCTCTGGCATCCCTATAACAGGATTGACAGCCGGATCATTGAGGTAGCAGCCCATCAGGTCGGTGAGGATGAGATAAGCTTGTCCACTCTGGGACGAGTTTATACTATTGATTTTAATTCTATGCAGCAAATCAATGAGGACACGGGAACAGCACGTGCCATTCAGAGAAAACCTAACCCCTTAGCCAATACTAACACTAGTGGATATTCAGAGTTAAAGAAGGACGATGCTCGAGCACAGCTTATGAAAGAGGATCCGGAACTGGCTAAGTCTTTCATTAAGACGTTGTTTGGTGTTCTTTATGAAGTGTACAGCTCCTCAGCAGGGCCTGCAGTCAGACATAAGTGCCTTAGAGCAATTCTTAGGATAATTTATTTTGCGGATGCCGAACTTCTGAAGGATGTTCTGAAAAATCATGCTGTTTCAAGTCACATTGCTTCCATGCTCTCGAGCCAAGACCTGAAGATAGTAGTTGGAGCACTCCAGATGGCAGAGATCTTAATGCAGAAGTTACCTGATATCTTCAGTGTCTACTTCAGAAGAGAAGGTGTAATGCATCAAGTAAAACATTTAGCAGAATCAGAGTCTTTGTTGACAAGTCCACCAAAGGCGTGTACAAATGGGTCAGGATCCTTGGGGTCTACGACATCCGTCAGCAGTGGAACAGCCACGGCCGCCACTAATGCTGGAGCTGATTTGGGGTCCCCCAGCTTGCAGCATAGCAGAGATGACTCTCTAGATCTCAGCCCTCAAGGTCGATTAAGTGATGTTCTAAAGAGAAAACGACTGCCAAAACGAGGGCCAAGAAGGCCAAAGTACTCACCTCCAAGAGATGATGACAAAGTAGACAATCAAGCTAAAAGCCCCACCACTACTCAGTCACCTAAATCTTCTTTCCTGGCAAGCTTGAATCCAAAAACATGGGGAAGGTTAAGCGCACAGTCCAACAGCAACAATATTGAGCCGGCACGAACTGCAGGAGTTAGTGGTCTTGCCAGGGCTGCCACAAAGGACACCATATCCAATAATAGAGAAAAAATTAAAGGATGGATTAAGGAGCAGGCACACAAATTTGTAGAGCATTACTTTAGTTCTGAGAATATGGACGGAACCAATCCTGCACTGAATGTCCTTCAGAGACTTTGTGCTGCAACCGAACAACTCAACCTCCAGGTGGATGGTGGAGCTGAGTGCCTTGTAGAAATCCGTAGCATAGTCTCAGAGTCAGATGTTTCATCATTTGAAATCCAGCACAGTGGATTTGTGAAGCAGTTGTTGCTGTATTTGACGTCTAAAAGTGAAAAGGATGCTGTGAGCAGAGACATCCGATTAAAGAGATTCCTTCATGTATTTTTTTCTTCTCCACTTCCTGGAGAAGAGCCCCTCGGGAGAGTGGAGCCAGTGGGTAATGCGCCTTTGTTGGCTTTAGTTCACAAGATGAACAACTGCCTCAGCCAGATGGAACAATTTCCAGTCAAAGTGCATGATTTCCCTAGTGGGAATGGAACAGGAGGCAGAGGATCACAGGCTTTAAAATTTTTCAACACACATCAGTTAAAATGCCAGTTACAGAGACATCCCGATTGTGCCAACGTGAAGCAGTGGAAGGGCGGCCCTGTCAAGATCGACCCCCTGGCTCTGGTGCAAGCTATTGAGAGATACCTTGTCGTTAGAGGATATGGAAGAGTCCGAGAAGATGAAGAGGACAGTGATGATGATGGATCAGATGAGGAGATAGATGAGTCTCTGGCTGCGCAGTTCTTAAATTCAGGCAACGTAAGACACAGGCTACAGTTTTACATTGGAGAGCATTTGCTGCCGTACAACATGACTGTGTATCAGGCAGTGCGGCAGTTCAGTATACAGGCTGAAGACGAGAGAGAATCCACAGATGACGAGAGCAACCCTCTGGGGAGAGCTGGTATTTGGACAAAGACTCACACAATATGGTATAAACCTGTGAGAGAAGATGAAGAAAGTACTAAAGATTGTGTTGGTGGTAAAAGAGGAAGAGCCCAAACAGCTCCAACGAAAACTTCCCCTAGAAATGCAAAAAAGCATGATGAATTGTGGCATGACGGAGTGTGCCCATCAGTATCAAATCCTTTAGAAGTTTACCTCATTCCCACACCACCTGAAAATATAACCTTTGAAGACCCGTCACTAGATGTGATCCTTCTTCTAAGGGTTCTACATGCCATCAGTAGATACTGGTATTACTTGTATGATAATGCAATGTGCAAGGAGATTATTCCAACTAGTGAATTTATTAACAGTAAGTTGACAGCAAAAGCAAATAGGCAGCTTCAAGATCCTTTAGTAATCATGACAGGAAACATCCCGACCTGGCTTACTGAGCTAGGAAAAACCTGCCCATTTTTCTTTCCTTTTGATACCCGACAAATGCTCTTTTATGTAACTGCATTTGATCGGGACCGGGCAATGCAAAGATTACTTGATACCAACCCAGAAATCAACCAGTCTGATTCTCAAGATAGCAGAGTTGCACCTAGATTGGATAGAAAAAAACGTACTGTGAACAGAGAAGAGCTGTTGAAACAAGCTGAGTCTGTGATGCAGGACCTTGGCAGCTCCCGGGCCATGTTAGAAATCCAGTATGAGAACGAGGTTGGTACAGGTCTTGGGCCTACACTGGAGTTTTATGCACTTGTATCTCAGGAACTACAGAGAGCTGACTTGGGTCTCTGGAGAGGTGAAGAAGTAACTCTTAGCAACCCAAAAGGAAGCCAAGAAGGGACCAAGTATATTCAAAACCTCCAGGGCCTGTTTGCGCTTCCCTTTGGTAGGACAGCTAAGCCAGCTCATATCGCAAAGGTTAAGATGAAGTTTCGCTTCTTAGGAAAATTAATGGCTAAGGCTATCATGGATTTCAGATTGGTGGACCTGCCCCTGGGTTTGCCCTTTTACAAGTGGATGTTGCGGCAAGAAACTTCCTTGACTTCGCATGATTTGTTTGACGTTGACCCTGTTGTAGCCAGATCAGTGTGTCACCTGGAGGACATTGTCAGACAGAAGAAAAGGCTGGAACAGGACAAATCCCAGACCAAAGAGAGTCTACAGTATGCATTAGAAACCCTTACTATGAATGGCTGCTCAGTTGAAGATCTAGGATTGGATTTCACACTGCCAGGATTTCCCAACATCGAACTGAAGAAAGGCGGGAAGGATATCCCGGTCACAATCCACAATTTGGAGGAGTATCTAAGATTGGTTATCTTCTGGGCACTAAATGAAGGCGTTTCTAGGCAGTTTGACTCGTTCAGAGATGGATTTGAATCCGTTTTCCCACTCAGTCATCTTCAGTACTTCTACCCAGAGGAACTGGATCAGCTCTTGTGTGGCAGTAAAGCAGACACTTGGGATGCAAAGACCTTGATGGAGTGCTGTAGGCCTGATCACGGTTATACCCATGACAGCCGAGCTGTGAAGTTCTTGTTTGAAATTCTTAGTGGTTTTGATAATGAGCAGCAAAGGTTGTTTCTCCAGTTTGTGACTGGTAGCCCGAGATTGCCTGTTGGAGGTTTCCGCAGCCTGAATCCACCTTTGACAATTGTCCGGAAGACGTTTGAATCAACAGAAAACCCAGATGACTTCTTACCCTCAGTAATGACTTGTGTGAACTATCTAAAGTTGCCGGACTACTCAAGCATTGAGATAATGCGTGACAAACTGTTAATAGCAGCAAGAGAAGGTCAGCAGTCATTCCATCTCTCCTGA

Related Sequences

XP_004868074.1 Protein

Trip12 PREDICTED: E3 ubiquitin-protein ligase TRIP12 isoform X6 [Heterocephalus glaber]

Length: 2063 aa      View alignments
>XP_004868074.1
MSNRPNNNPGGSLRRSQRNTAGAQLQDDSIGGRSLLGQAKHKRYSPPESRKSNSKAPKVQSNTTSELSRGHLSKRSCSTSSAVTVPQPEDPDRANTSERQKTGHVPKKDNSRGVKRSASPDYNRTSSPSSAKKPRALQHTESPSETNKPHSKSKKRHLDQEQQLKSAQSPSTSKAHSRKSGAAGSSRSQKRKRTEGFCVKSGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSSAASTSSSSSAVASASSTVPPGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSSKFDWAARFSPKVSLSKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESSQETVNSSAARTDEAPQGAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVVRMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGEDEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARAQLMKEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPPKACTNGSGSLGSTTSVSSGTATAATNAGADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSNNIEPARTAGVSGLARAATKDTISNNREKIKGWIKEQAHKFVEHYFSSENMDGTNPALNVLQRLCAATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRLKRFLHVFFSSPLPGEEPLGRVEPVGNAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGGRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDEEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVRQFSIQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESTKDCVGGKRGRAQTAPTKTSPRNAKKHDELWHDGVCPSVSNPLEVYLIPTPPENITFEDPSLDVILLLRVLHAISRYWYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQEGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHDLFDVDPVVARSVCHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNGCSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVSRQFDSFRDGFESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILSGFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMRDKLLIAAREGQQSFHLS