Sequence details NCBI ID: XM_004868008.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Pid1
Gene Name phosphotyrosine interaction domain containing 1, transcript variant X1
Entrez Gene ID 101718439

Database interlinks

Part of NW_004624843.1 (Scaffold)

For more information consult the page for NW_004624843.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PID1 ENSCPOG00000008499 (Guinea pig)

Gene Details

phosphotyrosine interaction domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007640, Guinea pig)

Protein Percentage 96.77%
CDS Percentage 93.7%
Ka/Ks Ratio 0.04097 (Ka = 0.0138, Ks = 0.338)

PID1 ENSG00000153823 (Human)

Gene Details

phosphotyrosine interaction domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000375907, Human)

Protein Percentage 94.47%
CDS Percentage 88.79%
Ka/Ks Ratio 0.03588 (Ka = 0.0272, Ks = 0.7587)

Pid1 ENSMUSG00000045658 (Mouse)

Gene Details

phosphotyrosine interaction domain containing 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000127716, Mouse)

Protein Percentage 95.85%
CDS Percentage 88.63%
Ka/Ks Ratio 0.02191 (Ka = 0.0176, Ks = 0.8055)

Pid1 ENSRNOG00000029735 (Rat)

Gene Details

phosphotyrosine interaction domain containing 1 (Pid1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000050069, Rat)

Protein Percentage 77.42%
CDS Percentage 75.58%
Ka/Ks Ratio 0.12291 (Ka = 0.1704, Ks = 1.3867)

Genome Location

Sequence Coding sequence

Length: 654 bp    Location: 3165280..2931051   Strand: -
Raw sequence   
>XM_004868008.1
ATGTGGCAGCCGGCCACGGAGCGCCTGCAGCACTTTCAGACCATGCTGAAGTCGAAACTGAATGTCCTCACACTGAAAAAGGAGCCTCTCCCAGCCGTCATCTTCCACGAGCCTGAGGCCATCGAGCTGTGCACCACCACCCCGCTGATGAAGACCAGAACTCATAGCAGCTGCAAGGTCACCTATCTGGGCAAAGTCTCTACCACAGGCATGCAGTTCTTGTCAGGCTGCACGGAGAAGCCAGTGACTGAGCTCTGGAAGAAGCACACACTCACCCGAGAAGACGTCTTCCCAGCCAACGCGCTTCTGGAGATCCGTCCTTTCCAAGTGTGGCTGCATCACCTCGACCACAAAGGCGAGGCCACGGTGCATATGGATACCTTCCAGGTGGCCCGCATCGCCTACTGCACCGCTGACCACAACGTGAGCCCCAACATCTTCGCCTGGGTTTACAGGGAGATCAACGATGACCTGTCCTACCAGATGGACTGCCACGCTGTGGAATGCGAGAGCAAGCTGGAGGCCAAGAAGCTGGCCCACGCCATGATGGAGGCCTTCAAGAAGACTTTCCACAGTATGAAGAGCGACGGGCGGATCCATAGGAACAGCTCCTCCGAAGAGGTTTCCCAGGAACTGGAGTCTGACGATGGCTGA

Related Sequences

XP_004868065.1 Protein

Pid1 PREDICTED: PTB-containing, cubilin and LRP1-interacting protein isoform X1 [Heterocephalus glaber]

Length: 217 aa      View alignments
>XP_004868065.1
MWQPATERLQHFQTMLKSKLNVLTLKKEPLPAVIFHEPEAIELCTTTPLMKTRTHSSCKVTYLGKVSTTGMQFLSGCTEKPVTELWKKHTLTREDVFPANALLEIRPFQVWLHHLDHKGEATVHMDTFQVARIAYCTADHNVSPNIFAWVYREINDDLSYQMDCHAVECESKLEAKKLAHAMMEAFKKTFHSMKSDGRIHRNSSSEEVSQELESDDG