Details from NCBI annotation

Gene Symbol Ccl20
Gene Name chemokine (C-C motif) ligand 20
Entrez Gene ID 101716599

Database interlinks

Part of NW_004624843.1 (Scaffold)

For more information consult the page for NW_004624843.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CCL20 ENSCPOG00000010180 (Guinea pig)

Gene Details

chemokine (C-C motif) ligand 20

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000009141, Guinea pig)

Protein Percentage 75.26%
CDS Percentage 84.19%
Ka/Ks Ratio 0.59537 (Ka = 0.1586, Ks = 0.2664)

CCL20 ENSG00000115009 (Human)

Gene Details

chemokine (C-C motif) ligand 20

External Links

Gene Match (Ensembl Protein ID: ENSP00000351671, Human)

Protein Percentage 73.96%
CDS Percentage 82.29%
Ka/Ks Ratio 0.50892 (Ka = 0.1719, Ks = 0.3379)

Ccl20 ENSMUSG00000026166 (Mouse)

Gene Details

chemokine (C-C motif) ligand 20

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000109064, Mouse)

Protein Percentage 64.95%
CDS Percentage 74.91%
Ka/Ks Ratio 0.60088 (Ka = 0.2784, Ks = 0.4632)

Ccl20 ENSRNOG00000015992 (Rat)

Gene Details

chemokine (C-C motif) ligand 20 (Ccl20), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021730, Rat)

Protein Percentage 60.0%
CDS Percentage 69.82%
Ka/Ks Ratio 0.61033 (Ka = 0.3617, Ks = 0.5927)

Genome Location

Sequence Coding sequence

Length: 294 bp    Location: 2017745..2020510   Strand: +
>XM_004868003.1
ATGATGTGCAGTAGCAAGACTTTGTTCCTGGCTGCTTTGATGTCAGTGCTGCTACTCCACCTCAGCAGCAAGTCAGAAGCAGCAAGCAGCTTTGACTGTTGCCTCAAATATACACAACATGTAATTCCCACCAGTTTTATTGTGGGCTTCACACAGCAGCTGGCCAATGAAGCTTGTGACATCAATGCTATCATCTTTCACACAAAAAGAAGATTATCTGTGTGTGCAAACCCGAAGCAGAACTGGGTGAAGAAGGCTGTGCGCATTCTCAGCAAAAAAGTCAAGAAGATGTAA

Related Sequences

XP_004868060.1 Protein

Ccl20 PREDICTED: c-C motif chemokine 20 [Heterocephalus glaber]

Length: 97 aa      View alignments
>XP_004868060.1
MMCSSKTLFLAALMSVLLLHLSSKSEAASSFDCCLKYTQHVIPTSFIVGFTQQLANEACDINAIIFHTKRRLSVCANPKQNWVKKAVRILSKKVKKM