Details from NCBI annotation

Gene Symbol Agfg1
Gene Name ArfGAP with FG repeats 1, transcript variant X2
Entrez Gene ID 101714156

Database interlinks

Part of NW_004624843.1 (Scaffold)

For more information consult the page for NW_004624843.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

AGFG1 ENSCPOG00000001288 (Guinea pig)

Gene Details

ArfGAP with FG repeats 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001167, Guinea pig)

Protein Percentage 96.62%
CDS Percentage 94.72%
Ka/Ks Ratio 0.09873 (Ka = 0.0164, Ks = 0.1664)

AGFG1 ENSG00000173744 (Human)

Gene Details

ArfGAP with FG repeats 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000387282, Human)

Protein Percentage 96.61%
CDS Percentage 94.23%
Ka/Ks Ratio 0.0868 (Ka = 0.0165, Ks = 0.1898)

Agfg1 ENSMUSG00000026159 (Mouse)

Gene Details

ArfGAP with FG repeats 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000070250, Mouse)

Protein Percentage 95.89%
CDS Percentage 91.29%
Ka/Ks Ratio 0.07421 (Ka = 0.0235, Ks = 0.3164)

Agfg1 ENSRNOG00000015619 (Rat)

Gene Details

ArfGAP with FG repeats 1 (Agfg1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021309, Rat)

Protein Percentage 95.36%
CDS Percentage 91.25%
Ka/Ks Ratio 0.08232 (Ka = 0.0259, Ks = 0.3142)

Genome Location

Sequence Coding sequence

Length: 1689 bp    Location: 1751808..1806631   Strand: +
>XM_004867998.1
ATGGCGGCCAGCGCCAAGCGCAAGCAGGAGGAGAAGCACCTGAAGATGCTGCGGGACATGACCGGCCTCCCGCACAACCGAAAGTGCTTCGACTGCGACCAGCGCGGCCCCACCTACGTGAACATGACGATCGGCTCCTTCGTCTGCACCTCCTGCTCCGGCAGCCTGCGAGGGTTAAATCCTCCACACAGGGTGAAGTCTATCTCCATGACAACATTCACACAACAGGAAATTGAATTCCTGCAAAAACATGGAAATGAAGTTTGTAAACAGATTTGGCTAGGATTATTTGATGATAGATCTTCAGCAATTCCAGACTTCAGGGACCCACAAAAAGTGAAAGAATTTCTACAAGAAAAATACGAAAAGAAAAGATGGTATGTCCCCCCGGAACAAGCCAAGGTTGTGGCATCAGTGCATGCGTCAATTTCAGGGTCTTCAGCCAGTAGCACGAGCAGCACACCTGAGGTCAAACCACTGAAATCTCTCTTAGGAGATTCTGCACCAGCACTGCACCTAAATAAGGGCACACCTAGTCAGTCCCCAGTTGTAGGTCGCTCCCAAGGGCAGCAGCAGGAAAAGAAGCAGTTTGACCTTTTGAGTGATCTTGGCTCAGACATCTTTGCTGCTCCAGCTCCTCAGTCAACAGCCACAGCCAATTTTGCTAACTTTGCACATTTCAACAGTCATGCAGCTCAGAATTCTGCAAATGCAGATTTTGCAAACTTTGATGCATTTGGACAGTCTAGTGGTTCGAGTAATTTTGGAGGTTTCCCCACAGCAAGTCACTCTCCTTTTCAGCCCCAAACCACAGGTGGAAGTGCTGGATCAGTAAATGCTAATTTTGCTCATTTTGATAACTTCCCCAAATCCTCCAGTGCTGATTTTGGAACCTTCAATACTTCCCAGAGTCATCAGACAGCATCAGTTGTTAATAAAGTTTCAACTAACAAACCTGGGTTACAGACAGCAGACAGATATGCAGCACTTGCGAATTTAGACAATATCTTCAGTGCTGGGCAAGGTGGTGATCAAGGAAGTGGTTTTGGGGCCACAGGGAAAGCTCCTGTTGGTTCTGTGGTTTCAGTTCCCAGTCAGTCAACTGCATCTTCAGACAAGTACGCGGCCTTGGCCGAATTAGACAGCGTGTTCAGCTCTGCGGCCACCTCCAGTAATGCATATACTTCCACTAGTAATGCTAGCAGCAGTGTTTTTGGAACAGTGCCAGTGGGTGCTTCAGCACAGACTCAGCCTGCTTCTTCAAGTGTGCCTGCTCCATTTGGAGCTACGCCTTCCACAAATCCATTTGTTGCTGCTGGTGGTCCTTCTGTGGCACCTTCTACAAATCCATTTCAGGCCAATGCCAGAGGAGCAACAGCGGCAACCTTCGGCACGGCGTCCATGAGCATGCCTGCGGGGTTCGGCACTCCTGCTCCCTATAGTCTTCCTACCAGCTTTAGCGGCAGCTTCCAGCAGCCTGCCTTCCCGGCCCAAGCAGCCTTCCCTCAACAGACAGCTTTTTCTCAACAGCCCAATGGTGCAGGTTTTGCAGCATTTGGACACACAAAGCCAGTGGTGACCCCTTTTGGTCAAGTTGCAGCTGCTGGAGTACCTAGTAATCCTTTTATGACTGGTCCACCAACAGGACAGTTTCCAACAGGGAGCTCATCAACCAATCCTTTCTTATAG

Related Sequences

XP_004868055.1 Protein

Agfg1 PREDICTED: arf-GAP domain and FG repeat-containing protein 1 isoform X2 [Heterocephalus glaber]

Length: 562 aa      View alignments
>XP_004868055.1
MAASAKRKQEEKHLKMLRDMTGLPHNRKCFDCDQRGPTYVNMTIGSFVCTSCSGSLRGLNPPHRVKSISMTTFTQQEIEFLQKHGNEVCKQIWLGLFDDRSSAIPDFRDPQKVKEFLQEKYEKKRWYVPPEQAKVVASVHASISGSSASSTSSTPEVKPLKSLLGDSAPALHLNKGTPSQSPVVGRSQGQQQEKKQFDLLSDLGSDIFAAPAPQSTATANFANFAHFNSHAAQNSANADFANFDAFGQSSGSSNFGGFPTASHSPFQPQTTGGSAGSVNANFAHFDNFPKSSSADFGTFNTSQSHQTASVVNKVSTNKPGLQTADRYAALANLDNIFSAGQGGDQGSGFGATGKAPVGSVVSVPSQSTASSDKYAALAELDSVFSSAATSSNAYTSTSNASSSVFGTVPVGASAQTQPASSSVPAPFGATPSTNPFVAAGGPSVAPSTNPFQANARGATAATFGTASMSMPAGFGTPAPYSLPTSFSGSFQQPAFPAQAAFPQQTAFSQQPNGAGFAAFGHTKPVVTPFGQVAAAGVPSNPFMTGPPTGQFPTGSSSTNPFL