Details from NCBI annotation

Gene Symbol Col4a4
Gene Name collagen, type IV, alpha 4, transcript variant X3
Entrez Gene ID 101709839

Database interlinks

Part of NW_004624843.1 (Scaffold)

For more information consult the page for NW_004624843.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

COL4A4 ENSCPOG00000000720 (Guinea pig)

Gene Details

collagen, type IV, alpha 4

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000000641, Guinea pig)

Protein Percentage 83.98%
CDS Percentage 87.57%
Ka/Ks Ratio 0.50492 (Ka = 0.1074, Ks = 0.2128)

COL4A4 ENSG00000081052 (Human)

Gene Details

collagen, type IV, alpha 4

External Links

Gene Match (Ensembl Protein ID: ENSP00000379866, Human)

Protein Percentage 80.74%
CDS Percentage 83.77%
Ka/Ks Ratio 0.36862 (Ka = 0.1297, Ks = 0.3519)

Col4a4 ENSMUSG00000067158 (Mouse)

Gene Details

collagen, type IV, alpha 4

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000084282, Mouse)

Protein Percentage 78.0%
CDS Percentage 80.04%
Ka/Ks Ratio 0.31286 (Ka = 0.1586, Ks = 0.507)

Genome Location

Sequence Coding sequence

Length: 5052 bp    Location: 1486252..1364674   Strand: -
>XM_004867983.1
ATGGAGTGCTCTTCCAGATGTACTAAACCCTTTGGCTCAGATCCCTGGTCATTTATACTCATTCTGTTTTCTATACCACATGTGTATGGGGGTGGAAAGAAGTATATCAGTCCATGTGGAGGAAGAGACTGCTCTGTTTGCCAGTGCTTTCCTGAAAAGGGGTCCCGGGGTCAACCAGGACCACTAGGATCACAGGGTCCCATAGGGCCTCTGGGACCCCCAGGACCCATTGGAATTCCAGGAGAGAAAGGACTGAGAGGTGACAGTGGCTCTCCTGGGGCCGCAGGGGAGAAAGGAGACAAGGGTCCAACTGGTGTTCCTGGATTTCCGGGTTTGGATGGTATACCTGGTCACCCAGGACCTCCAGGGTCCAGAGGCAAACCTGGAATGAACGGTTACAATGGCTCAAGAGGAAACCCGGGGCTTCCAGGGGAAAGAGGAGCTCCTGGCCCAAGAGGCACCCCAGGCCTTCTTGGAGAAAAAGGAGAAAAAGGAAATTCAGTGTTCATTTCAGGTGGCATTAAAGGTATTCAGGGAGATCGAGGGGACCCAGGACCAGCCGGGTTGCCAGGATCCCGAGGTGCTCGAGGACCCACAGGCCCAATGGGAGGTCCTGGAGCCCCCGGCTTGACAGGAGCTCCAGGTCACCCTGGGAGTCCAGGTTTCAAGGGCAATCCTGGTGTTGGAGTAAGAGGGCAAATGGGGGACCCGGGTGAAGTTGGCCAACAAGGTTTTCCTGGACCCACCCTATTGGTAGAGCCACCTGATTTTTGCCTCTATAAAGGAGAAAAGGGTGTAAAAGGAATTCCTGGAATGATTGGACCTCCAGGACCACCAGGACTCAAGGGAGAACTTGGTATTGGGGTGAAAGGAGAGAAAGGCATTCCTGGCTTCCCAGGACCTCGGGGTTACCCTGGTTCCTACGGATCTCCAGGCTTTCCAGGATTAAAGGGAGACCAAGGGCCCCCTGGAGACCCTGGGGTATTTGGATTTCTTGGCCCAAAGGGCGATCCTGGAGACCGCGGGTACCCGGGACCACCAGCTGTTTTGGTAACTCCAGCTCCTCCACTCAAAGGTCCTCCAGGGGACCGAGGATCCCCTGGCCGCTATGGAGAAATAGGAGATATTGGACCCCCTGGTCCCCCAGGTCCTTCGGGCCAACCAGGGGAAGCTTGTCCAGGCATGGTGGGACCTCTGGGACCACCAGGGCTTCCTGGTCCTCCAGGGTTTCCAGGGGAAGCCGGTATTCCTTCGAGGCCTGACTCCACCCCAGGAAAACCAGGGCAGCCAGGACCCCCTGGCTTACCCGGAGTCCCAGGGCTACAGGGTCCCGCAGGACCGAATGTGGTACATTGCAGTGTGGGGCTCCCTGGACCACAAGGAATAAAGGGCAAAATGGGCCCCCCGGGAGGAAGAGGCTCAAAAGGAGAAAAAGGAAACGAAGGACTCTGTGCCTGCCCACCTGGCCCTGTGGGGCCCCCTGGCCCTCTGGGGCTACCTGGGAGGCAGGGCGATAAGGGGGAAGCAGGGCTCCCAGGCTGGCTTGGAGGAAAAGGTGACCTAGGCCCTCCTGGCGCTGAAGGATCACCAGGGCAACCAGGAAAATCTGGTGTTCCAGGACCTTCTGGCAACAAAGGAACAAAGGGTGACATGGTGGTAGCAAGAGTTAAAGGGTACAAAGGAGAAAGAGGACCTGATGGGCCCCCTGGATTTCCAGGGCAGCCTGGACAAGATGGTCAGGATGGACATGCTGGAGAAAAGGGGGATCCAGGACCCCGGGGGGATCATGAAGATGCAGCCCCAGGTGAGAAGGGGTTTCCTGGCCCACTGGGTCCTCCTGGGGAAGCAGGACCAGTGGGGCCTCCGGGACTGGGATTTCCCGGTCCACCAGGAAAAAGAGGTCAACCAGGCATTCCAGGCCGCCCAGGAGAGAGGGGCCCTGATGGCCTTAAGGGGCTGAAAGGTGACTCCATCCCTTGTAATGTAACCTACCCTGGGAGGCCAGGCCTTCCAGGCTTTGATGGACCTCCAGGTCAGAAGGGATTTCCAGGTCCCCCGGGTGCTCCTGGGCTGAGGTGTTCGGATGGACCAAAAGGCCAACCAGGCCAACCAGGAATACCAGGAATACCAGGCCCACCTGGTTTTCGTGGTGACATGGGCGATCCGGGTTTTGGAGGTGAAAATGGGTCCTCCCCTCTTGGACCCCCAGGTCCCCCTGGGCCACGTGGAGTGAATGGTCAGAAGGGAACACCAGGAGACCCTGCATTTGGTCAGCCAGGACCCCCTGGAAATAGGGGTCTTCCGGGAGTGCCAGGGATAAAAGGACCCCAAGGTGACCCCGGATGCCCCGGGCCTGAAGGGGCAGCTGCCATTCCTGGCTTGCCAGGTCTCAAAGGTCCCAGAGGCAAAGCAGGAAGTGCTGGATTTCCAGGCATCCCAGGTCTACCAGGCCATTCCTGTGAAAGAGGCGCTCCTGGGATCCCAGGCCAACCAGGACCCCTGGGAGCTCCAGGTAGTCCAGGTGCCCCAGGTAGGAAAGGACAGCAAGGAGATATGGGGTCTCCTGGACCAGCTGGAATGAAGGGCTTCCCTGGATCCCCAGGACTGCTTGGGCCAGATGGACTCCCAGGACCTCCAGGAATCCCAGGCCGTTTTGGGGAAGATGGGCTACCTGGTCATCCAGGTCCAAAGGGACCCAGGGGGCTGCCTGGTCTCCCAGGCTTTCCAGGAGAGAGAGGAAATCCAGGCACCACAGGCCACCCAGGCAGAAAGGGAGAAATCGGAGAGAAGGGCTGGCCTGGCTTTCAGGGGGACCCGGGAGTCCGAGGTGCCAAAGGAGCCAGAGGACTTCCTGGAGATGAAGGAAAAATGGCCATCATTTCCAAAAGAGGGGACACTGGGGAACCTGGGCCTCCTGGAGATGGAGGGTTCGTAGGAGAGAGAGGTGACAGAGGAATTCCTGGGACACAAGGGAGAAGAGGAGAGCCAGGACGATATGGACCACCTGGATTTCCGAGGGGGGAACCTGGCAGAAATGGACAACGTGGGTTTCCAGGACCCCCTGGACCTCCAGGTTCCCCTGGGCTAAGAGGGATCATTGGTTTTCCAGGATTTCCAGGTGACCAGGGTGAGCCAGGTTCTCCAGGCCCCCCTGGATTTTCAGGAACTGATGGAACAAAAGGACCTAAAGGAAACAAAGGTGATCCTGCCAGTCAGTTTACTCTACCTGGTCCGAAGGGTGAGCCTGGTGGCCCTGGATATCAAGGACATGTGGGAGCCCCTGGAGAGCAAGGCTCGCCTGGAGTCCCAGGGCTGAGAGGACCACCAGGAACGCCAGGACCGCCTGGCTCCTCAGGGCCACCAGGGTGTCCAGGTGATCGGGGAAGGCCTGGGCCGAAGGGCTCTCCAGGAGAAATGGGGGATGCTGGGCCTCGAGGCCTCCCAGGGGATCCAGGGATGCCAGGTCCTCCAGGAATAAAAGGTCCTGCTGGGTTACCTGGCCTGCATGGCTTGCATGGTTTGAAGGGAGAGAAAGGAACCAAAGGTGCCTCAGGTTTGCACGAAATGGGCCCACCAGGTCCGGTGGGAATACCTGGTCAAAAAGGAGAGATAGGAGACCCTGGGAATCCCGGAATTTCTCCTCCAGGCCTTTTTGGAGAGAAAGGCTTTGCAGGCCCCCCAGGGAGACCAGGACCACCAGGTCCCGCAGGTGCCCCAGGCAAAGCTCCTAAGGGTGATGTTCCTGATCCTGGTCCACCTGGAGATGAGGGACCCCCTGGCCCTGATGGCCCACGAGGAGCTCCTGGGCCTCCGGGACCCCATGGGAGTGTTGACCTTCTGAAAGGGGAGCCAGGTGACTGTGGTCTGCCAGGGCCACCAGGTCCCCATGGCCCGCCAGGACCTCCCGGATGCCAGGGTGTTCCAGGATGTGATGGAAAAGATGGCCAAAAAGGACCAGTGGGATTTCCAGGGCCTCCAGGGCCACCTGGCCTTCCTGGAGCACCTGGAGAGAAGGGTTTACGTGGACCTCCAGGAAGGAGAGGGTTCATAGGTCCCCCAGGTCCCAGAGGTGAAGCTGGGCCACCTGCAGATGTGGATGCCTGTCCCCAAATCCCAGGGCTTCCTGGGGTGCCAGGCCCACGAGGACCAGAAGGAGCCATGGGGCTCCCAGGACAGCAGGGTCCCCCAGGACCAGGGTGCAAAGGGAAGCCTGGGCCGGATGGCAGGAGGGGCGAGGATGGAGTCCCTGGGCCTCCCGGGCCTCCCGGGCACACAGGGGACAGCGGAGAGGCCGGCTGCCCTGGAGCACCAGGCCCTCCTGGTCCAACTGGCGACCCTGGCCCCAAAGGGAGTGGGCTTGGCTACCTCAGTGGCTTCCTCCTAGTGGTCCACAGCCAAACGGATGAGGAACCCGCCTGCCCCATGGGGATGCCCCGGCTCTGGAGTGGGTACAGCCTGCTCTACCTGGAAGGGCAGGAGAAAGCACACAACCAGGACCTCGGTCTGGCGGGATCTTGCCTTCCTGTGTTCAGCACGCTGCCCTTTGCCTACTGCAACGTCCACCAAGTGTGCCACTACGCCCGGAGGAACGACAGGTCCTATTGGCTGGCCAGCGCCGCGCCCCTCCCCATGGCGCCCGTGTCGGAGGAAGACATCCGACCCCACGTGAGCCGCTGCGCCGTGTGCGAGGCTCCAGCGCAGGCTGTGGCGGTGCACAGCCAGGACCAGGCCATCCCGCCGTGTCCCCGGGCCTGGAGGAGCCTCTGGATCGGGTACTCGTTCCTGATGCACACAGGAGCTGGGGACCAAGGAGGAGGGCAGGCCCTGATGTCACCTGGCAGCTGCCTACAGGATTTCAGAGCGGCGCCGTTCCTCGAATGCCAAGGGCGCCAGGGCACCTGCCACGTTTTTGCAAATGAGTACAGCTTCTGGCTGACCACGGTGAAACCAGACTTGCAGTTTTCCTCTGCGCCGTCACCAGACACCTTAAAAGATGGCTACGCGCAGCGCCAGAAGATCAGCAGGTGCCAGGTCTGCGTGAAGTACAGCTAG

Related Sequences

XP_004868040.1 Protein

Col4a4 PREDICTED: collagen alpha-4(IV) chain isoform X3 [Heterocephalus glaber]

Length: 1683 aa     
>XP_004868040.1
MECSSRCTKPFGSDPWSFILILFSIPHVYGGGKKYISPCGGRDCSVCQCFPEKGSRGQPGPLGSQGPIGPLGPPGPIGIPGEKGLRGDSGSPGAAGEKGDKGPTGVPGFPGLDGIPGHPGPPGSRGKPGMNGYNGSRGNPGLPGERGAPGPRGTPGLLGEKGEKGNSVFISGGIKGIQGDRGDPGPAGLPGSRGARGPTGPMGGPGAPGLTGAPGHPGSPGFKGNPGVGVRGQMGDPGEVGQQGFPGPTLLVEPPDFCLYKGEKGVKGIPGMIGPPGPPGLKGELGIGVKGEKGIPGFPGPRGYPGSYGSPGFPGLKGDQGPPGDPGVFGFLGPKGDPGDRGYPGPPAVLVTPAPPLKGPPGDRGSPGRYGEIGDIGPPGPPGPSGQPGEACPGMVGPLGPPGLPGPPGFPGEAGIPSRPDSTPGKPGQPGPPGLPGVPGLQGPAGPNVVHCSVGLPGPQGIKGKMGPPGGRGSKGEKGNEGLCACPPGPVGPPGPLGLPGRQGDKGEAGLPGWLGGKGDLGPPGAEGSPGQPGKSGVPGPSGNKGTKGDMVVARVKGYKGERGPDGPPGFPGQPGQDGQDGHAGEKGDPGPRGDHEDAAPGEKGFPGPLGPPGEAGPVGPPGLGFPGPPGKRGQPGIPGRPGERGPDGLKGLKGDSIPCNVTYPGRPGLPGFDGPPGQKGFPGPPGAPGLRCSDGPKGQPGQPGIPGIPGPPGFRGDMGDPGFGGENGSSPLGPPGPPGPRGVNGQKGTPGDPAFGQPGPPGNRGLPGVPGIKGPQGDPGCPGPEGAAAIPGLPGLKGPRGKAGSAGFPGIPGLPGHSCERGAPGIPGQPGPLGAPGSPGAPGRKGQQGDMGSPGPAGMKGFPGSPGLLGPDGLPGPPGIPGRFGEDGLPGHPGPKGPRGLPGLPGFPGERGNPGTTGHPGRKGEIGEKGWPGFQGDPGVRGAKGARGLPGDEGKMAIISKRGDTGEPGPPGDGGFVGERGDRGIPGTQGRRGEPGRYGPPGFPRGEPGRNGQRGFPGPPGPPGSPGLRGIIGFPGFPGDQGEPGSPGPPGFSGTDGTKGPKGNKGDPASQFTLPGPKGEPGGPGYQGHVGAPGEQGSPGVPGLRGPPGTPGPPGSSGPPGCPGDRGRPGPKGSPGEMGDAGPRGLPGDPGMPGPPGIKGPAGLPGLHGLHGLKGEKGTKGASGLHEMGPPGPVGIPGQKGEIGDPGNPGISPPGLFGEKGFAGPPGRPGPPGPAGAPGKAPKGDVPDPGPPGDEGPPGPDGPRGAPGPPGPHGSVDLLKGEPGDCGLPGPPGPHGPPGPPGCQGVPGCDGKDGQKGPVGFPGPPGPPGLPGAPGEKGLRGPPGRRGFIGPPGPRGEAGPPADVDACPQIPGLPGVPGPRGPEGAMGLPGQQGPPGPGCKGKPGPDGRRGEDGVPGPPGPPGHTGDSGEAGCPGAPGPPGPTGDPGPKGSGLGYLSGFLLVVHSQTDEEPACPMGMPRLWSGYSLLYLEGQEKAHNQDLGLAGSCLPVFSTLPFAYCNVHQVCHYARRNDRSYWLASAAPLPMAPVSEEDIRPHVSRCAVCEAPAQAVAVHSQDQAIPPCPRAWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLQDFRAAPFLECQGRQGTCHVFANEYSFWLTTVKPDLQFSSAPSPDTLKDGYAQRQKISRCQVCVKYS