Details from NCBI annotation

Gene Symbol Phf20
Gene Name PHD finger protein 20
Entrez Gene ID 101699970

Database interlinks

Part of NW_004624842.1 (Scaffold)

For more information consult the page for NW_004624842.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PHF20 ENSCPOG00000002034 (Guinea pig)

Gene Details

PHD finger protein 20

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001840, Guinea pig)

Protein Percentage 88.93%
CDS Percentage 89.55%
Ka/Ks Ratio 0.27153 (Ka = 0.0729, Ks = 0.2686)

PHF20 ENSG00000025293 (Human)

Gene Details

PHD finger protein 20

External Links

Gene Match (Ensembl Protein ID: ENSP00000363124, Human)

Protein Percentage 93.41%
CDS Percentage 91.48%
Ka/Ks Ratio 0.10362 (Ka = 0.0342, Ks = 0.3298)

Phf20 ENSMUSG00000038116 (Mouse)

Gene Details

PHD finger protein 20

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000043138, Mouse)

Protein Percentage 89.31%
CDS Percentage 87.82%
Ka/Ks Ratio 0.1228 (Ka = 0.0569, Ks = 0.4632)

Phf20 ENSRNOG00000019948 (Rat)

Gene Details

PHD finger protein 20 (Phf20), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000027067, Rat)

Protein Percentage 89.05%
CDS Percentage 87.47%
Ka/Ks Ratio 0.12486 (Ka = 0.058, Ks = 0.4648)

Genome Location

Sequence Coding sequence

Length: 2277 bp    Location: 3669576..3511525   Strand: -
>XM_004867963.1
ATGACAAAGCATCCACCTAACAGAAGAGGAATCAGCTTTGAAGTGGGAGCCCAGTTGGAAGCCCGGGACCGTTTAAAAAACTGGTATCCAGCTCACATAGAAGACATTGACTACGAGGAAGGAAAAGTACTCATCCATTTCAAGCGTTGGAACCATCGTTATGATGAATGGTTTTGCTGGGACAGTCCTTATTTACGCCCTTTAGAGAAAATACAACTGAGAAAAGAGGGTTTACATGAAGAGGATGGATCTTCTGAATTTCAGATAAACGAGCAGGTCCTTGCTTGCTGGTCTGATTGTCGTTTTTACCCAGCCAAAGTCACTGCTGTTAACAAGGATGGTACTTACACTGTGAAATTTTATGATGGAGTAGTTCAGACTGTCAAACATATTCATGTCAAAGCTTTTTCCAAAGATCAGAATATTGTGGGTAATGCTAGGCCTAAAGAAACAGATCACAAAAGTCTTTCATCATCTCCTGATAAACGAGAGAAGTTTAAAGAGCAGAGAAAAGCCACAATCAATGTGAAGAAAGACAAAGAGGATAAAGCCTTAAAGACAGAAAAGCGACCCAAGCAGCCTGACAAAGAAGGAAAGTTAATCTGTTCTGAAAAAGGAAAGGTGTCTGAGAAAAACCTTCCCAAGAACGAGAAGGAAGATAAGGAGAACATTTCAGAGAATGACAGGGAGTACTCTGGAGACACCCAAGTGGACAAGAAACCTGAAAATGACATTGTGAAGAGTCCACAAGAGAACTTGAGGGAGCCAAAAAGAAAACGAGGCAGACCCCCTTCCATAGCTCCTACTGCTGTGGATTCAAACTCTCAAACTTTACAACCAATAACATTGGAACTGAGAAGACGGAAAATATCAAAAGGAAGTGATGTCCCGTTAAAACGGCCTCGACTTGACAAAAATTCATCCCAGGAGAAGTCAAAAAACTGCTCTGAAAAAGACTTATCCAGGAGACGGTCTTCCAGGCTATCCACTAATGGGACCCATGAGATCCTAGATCCTTTTTGTATGTTTGTTGGTGATGCTGAGAGTGAACCAAGGGCCTACTGCACATTAGTACCAAATGCTTTTAAGAAAACAGATGATTTTGTGACATCTAATGTGCCAGCTGTGGACCTGGACCACAAATTTAGATGCAAGGTTGTGGACTGTTTAAAATTTTTCCGCAAAGCTAAACTGCTGCACTATCATATGAAATATTTCCATGGGATGGAGAAGTCACCAGAGCCAGAGGAAAGCCCAGGGAAGAGGCATGTCCAAACAAGGGGCTCTTCAGCTTCTGACAAGGCCGGCCAGGAGAGCTTGACTAGGAAGCGGGTCTCTGCAAGTTCTCCGACTGCAAAAGACAAGGAAAAGAATAAAGAGAAAAAATTCAAAGAGTTTGTGAGAGTGAAACCAAAGAAGAAGAAGAAAAAGAAAAAGAAAACCAAACCTGAATGCCCCTGCAGTGAGGAGATCAGTGACACTTCCCAGGAACCATCGCCACCCAAGGCATTTGGTGTGACAAGGTGTGGGTCCTCACACAAGCCTGTAGTCCATATGAGCCCACAGCTCCATGGCACAGAAACTGGCAACCACAAAGGGAAATTGAAAGCATCTGAGGAGGATAATTTGAGTGAGTCCTCTTCTGAGAGTTTTCTTTGGAGTGATGAGGAGTATGGTCAAGATGTTGATGTGACTACCAACCCAGATGAGGAACTTGATGGGGATGACCGCTATGATTTTGAGGTGGTCCGTTGCATCTGTGAAGTCCAGGAGGAAAATGATTTCATGATTCAGTGTGAAGAGTGCCAGTGCTGGCAGCATGGAGTCTGCATGGGATTACTGGAAGAAAATGTACCTGAGAAATACACCTGTTATGTTTGCCAAGACCCTCCAGGTCAAAGGCCTAGCTTTAAGTACTGGTATGATAAGGAGTGGTTGAGCAGAGGACATATGCATGGCCTGGCCTTTTTGGAAGAGAACTACTCCCATCAGAATGCTAAGAAGATTGTGGCCACCCACCAGCTTCTTGGGGATGTGCAGAGAGTGATCGAGGTTCTGCACGGCCTCCAGCTCAAAATGAGCATCTTGCAAAGCAGGGAGCATCCTGATCTGCAACTGTGGTGCCAGCCTTGGAAACAACACTCAGGGGAAGGGAGAGCTCATTCCAGACACATCCATGTGATGGACACCAGAAGCAAGCAAGAAGCCCCCAGCTATAGAACTTTGAACGGGGCAGTGGAGAAGCCCCTACCCCTACCCCTTCCCCTGCCTCAGTCT

Related Sequences

XP_004868020.1 Protein

Phf20 PREDICTED: PHD finger protein 20, partial [Heterocephalus glaber]

Length: 759 aa      View alignments
>XP_004868020.1
MTKHPPNRRGISFEVGAQLEARDRLKNWYPAHIEDIDYEEGKVLIHFKRWNHRYDEWFCWDSPYLRPLEKIQLRKEGLHEEDGSSEFQINEQVLACWSDCRFYPAKVTAVNKDGTYTVKFYDGVVQTVKHIHVKAFSKDQNIVGNARPKETDHKSLSSSPDKREKFKEQRKATINVKKDKEDKALKTEKRPKQPDKEGKLICSEKGKVSEKNLPKNEKEDKENISENDREYSGDTQVDKKPENDIVKSPQENLREPKRKRGRPPSIAPTAVDSNSQTLQPITLELRRRKISKGSDVPLKRPRLDKNSSQEKSKNCSEKDLSRRRSSRLSTNGTHEILDPFCMFVGDAESEPRAYCTLVPNAFKKTDDFVTSNVPAVDLDHKFRCKVVDCLKFFRKAKLLHYHMKYFHGMEKSPEPEESPGKRHVQTRGSSASDKAGQESLTRKRVSASSPTAKDKEKNKEKKFKEFVRVKPKKKKKKKKKTKPECPCSEEISDTSQEPSPPKAFGVTRCGSSHKPVVHMSPQLHGTETGNHKGKLKASEEDNLSESSSESFLWSDEEYGQDVDVTTNPDEELDGDDRYDFEVVRCICEVQEENDFMIQCEECQCWQHGVCMGLLEENVPEKYTCYVCQDPPGQRPSFKYWYDKEWLSRGHMHGLAFLEENYSHQNAKKIVATHQLLGDVQRVIEVLHGLQLKMSILQSREHPDLQLWCQPWKQHSGEGRAHSRHIHVMDTRSKQEAPSYRTLNGAVEKPLPLPLPLPQS