Details from NCBI annotation

Gene Symbol Cdk5rap1
Gene Name CDK5 regulatory subunit associated protein 1, transcript variant X2
Entrez Gene ID 101721598

Database interlinks

Part of NW_004624842.1 (Scaffold)

For more information consult the page for NW_004624842.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

CDK5RAP1 ENSCPOG00000006663 (Guinea pig)

Gene Details

CDK5 regulatory subunit associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000006001, Guinea pig)

Protein Percentage 92.72%
CDS Percentage 92.84%
Ka/Ks Ratio 0.19821 (Ka = 0.0372, Ks = 0.1876)

CDK5RAP1 ENSG00000101391 (Human)

Gene Details

CDK5 regulatory subunit associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000217372, Human)

Protein Percentage 90.44%
CDS Percentage 88.28%
Ka/Ks Ratio 0.1277 (Ka = 0.0499, Ks = 0.3909)

Cdk5rap1 ENSMUSG00000027487 (Mouse)

Gene Details

CDK5 regulatory subunit associated protein 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105353, Mouse)

Protein Percentage 88.72%
CDS Percentage 86.61%
Ka/Ks Ratio 0.13295 (Ka = 0.0609, Ks = 0.4583)

Cdk5rap1 ENSRNOG00000015696 (Rat)

Gene Details

CDK5 regulatory subunit associated protein 1 (Cdk5rap1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021418, Rat)

Protein Percentage 87.8%
CDS Percentage 86.25%
Ka/Ks Ratio 0.16301 (Ka = 0.0703, Ks = 0.431)

Genome Location

Sequence Coding sequence

Length: 1764 bp    Location: 5843657..5885510   Strand: +
>XM_004867944.1
ATGCATTCTTTACAATGTGTCCTCCAAGCGCAGAAGTCTCTAAGGTGGGGGCCATTGGCTGCTATGTCGTGGCTGCTGCTCAGGACCTGCAGGGCACATAGCAGCCTCCCCACCTCTGCAAGTCCCAGTCCAGAGAGGCAGGAGAATGGAGTTCGAAAGGATTTCAGCTCCAGGCTGGCCACTGGACCAACTTTTCAGCATTTTTTAAGAAGTACCTCAGCTCCTCAAGAAAAGCCATCTTCTCCAGAAGCAGAGGATCCACCTCCCTATCTCACAGAGGAAGAGCTTTTAGGAAGACAGAGAAAAGTCTACCTTGAGACCTATGGCTGCCAGATGAATGTGAATGACACAGAGATAGCCTGGTCCATCTTACAGAAGAGTGGCTACCTCCGGACCAGGAACCTCCAAGAGGCTGATGTGATTCTTCTTGTTACATGTTCTATCAGGGAGAAGCCTGAGCAGACCATCTGGAACCGTTTACATCAGCTGAAAACCCTAAAGACAAAGCGGCTCCGATCTCGGGTACCTTTGAGGATTGGGATTCTAGGCTGCATGGCTGAGAGACTGAAGGAGGAGATCCTCAGCAGGGAGAAAATGGTGGACCTCTTGGCCGGTCCGGACGCCTATCGGGACCTTCCTCGGTTGCTGGCTGTTGTGGAGTCAGGACAACAAGCTGCCAATGTGCTGCTGTCTCTTGATGAGACCTATGCTGATGTCATGCCAGTCCAGACGAGCCCCAGTGCCACTTCTGCCTTCGTGTCAATCATGAGGGGATGTGACAACATGTGCAGCTACTGCATTGTTCCTTTCACACGTGGCCGGGAGAGGAGTCGGCCTGTTGCCTCCATTCTAGAGGAAGTGAGGAAGCTTTCTGACCAGGGGCTAAAAGAGGTGACACTTCTTGGACAGAATGTTAATAGTTTTCGAGACAATTCAGAGGTCCAGTTCAACAATTCAGTGTCTACTAACCTCAGTCATGGTTTCACCACCAACTATAAAACCAAACAAGGAGGGCTTCGTTTTTCTCACCTTTTGGATCAGGTTTCCCGAGTAGATCCTGAAATGAGGATCCGGTTCACCTCTCCCCACCCCAAGGATTTTCCTGATGAGGTTCTGCAGCTGATTCAAGAGAGAGACAACATCTGTAAGCAGATCCACCTGCCAGCCCAGAGTGGAAGCAGCCGTGTATTGGAGGCCATGCGGAGAGGATATTCACGAGAGGCTTATGTGGAGTTAGTTCACCATCTCAGAGAGTCTATTCCAGGGGTGTGCCTCAGCAGTGACTTCATTGCTGGCTTTTGTGGAGAGACAGAAGAAGATCACCAGCAAACAGTGTCTTTGCTTCGGGAAGTTCAGTACAACACAGGTTTCCTCTTTGCCTACAGCATGAGACAGACACGGGCATATCACAGGCTGAAGGACGATGTTCCAGAAGAAGTAAAATTAAGGCGTTTGGAGGAACTTATCACTGTCTTCCGCGAAGAAGCTTCAAAAGCCAATAAAACCTCTGTGGGTTGTACGCAGTTGGTACTAGTAGAGGGGCTCAGTAAACGCTCTGTCACAGACTTGTGTGGCCGGAATGATGGAAACCTTAAAGTAATTTTCCCTGATGCAGAGGTGGAGGATGGCATTAACCCTGGGCTTAAGGTCAGAGCCCAGCCTGGAGATTATGTCCTGGTAAAGATCACCTCTGCCAGCTCTCAGACGCTCAAAGGACATGTTCTGTGCAGGACCACTCTGAAGGACTCCTTAGCATATTGTTGA

Related Sequences

XP_004868001.1 Protein

Cdk5rap1 PREDICTED: CDK5 regulatory subunit-associated protein 1 isoform X2 [Heterocephalus glaber]

Length: 587 aa      View alignments
>XP_004868001.1
MHSLQCVLQAQKSLRWGPLAAMSWLLLRTCRAHSSLPTSASPSPERQENGVRKDFSSRLATGPTFQHFLRSTSAPQEKPSSPEAEDPPPYLTEEELLGRQRKVYLETYGCQMNVNDTEIAWSILQKSGYLRTRNLQEADVILLVTCSIREKPEQTIWNRLHQLKTLKTKRLRSRVPLRIGILGCMAERLKEEILSREKMVDLLAGPDAYRDLPRLLAVVESGQQAANVLLSLDETYADVMPVQTSPSATSAFVSIMRGCDNMCSYCIVPFTRGRERSRPVASILEEVRKLSDQGLKEVTLLGQNVNSFRDNSEVQFNNSVSTNLSHGFTTNYKTKQGGLRFSHLLDQVSRVDPEMRIRFTSPHPKDFPDEVLQLIQERDNICKQIHLPAQSGSSRVLEAMRRGYSREAYVELVHHLRESIPGVCLSSDFIAGFCGETEEDHQQTVSLLREVQYNTGFLFAYSMRQTRAYHRLKDDVPEEVKLRRLEELITVFREEASKANKTSVGCTQLVLVEGLSKRSVTDLCGRNDGNLKVIFPDAEVEDGINPGLKVRAQPGDYVLVKITSASSQTLKGHVLCRTTLKDSLAYC