Details from NCBI annotation

Gene Symbol Snta1
Gene Name syntrophin, alpha 1
Entrez Gene ID 101721241

Database interlinks

Part of NW_004624842.1 (Scaffold)

For more information consult the page for NW_004624842.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SNTA1 ENSCPOG00000005179 (Guinea pig)

Gene Details

syntrophin, alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004659, Guinea pig)

Protein Percentage 95.64%
CDS Percentage 93.47%
Ka/Ks Ratio 0.09807 (Ka = 0.0216, Ks = 0.2204)

SNTA1 ENSG00000101400 (Human)

Gene Details

syntrophin, alpha 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000217381, Human)

Protein Percentage 92.28%
CDS Percentage 89.57%
Ka/Ks Ratio 0.11555 (Ka = 0.044, Ks = 0.3804)

Snta1 ENSMUSG00000027488 (Mouse)

Gene Details

syntrophin, acidic 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000105350, Mouse)

Protein Percentage 93.99%
CDS Percentage 87.51%
Ka/Ks Ratio 0.06294 (Ka = 0.0357, Ks = 0.5675)

Snta1 ENSRNOG00000016062 (Rat)

Gene Details

syntrophin, alpha 1 (Snta1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000021715, Rat)

Protein Percentage 94.39%
CDS Percentage 88.84%
Ka/Ks Ratio 0.06343 (Ka = 0.0299, Ks = 0.4721)

Genome Location

Sequence Coding sequence

Length: 1518 bp    Location: 5805426..5834559   Strand: +
>XM_004867942.1
ATGGCATCAGGCAGACGCGCCCCGCGCACCGGGCTGCTGGAGCTGAGCGCCGGGGCGGGCTCGGGGGCCGGCGGCGAGCGGTGGCAGCGGGTGTTGCTCAGTCTGGCAGAGGACGCTCTGACCGTGAGCCCCGCCGACGGCGAGCCCGGCCCCGAGCCTGGCGCTTCGCGGGAGCCTGAGTCCGCGCAGCTCAACGGCGCCGCCGAGCCGGGCGCGGCGCCCCCGCAGCTGCCCGAGGCGCTGCTGCTCCAGCGGCGCCGCGTGACTGTGCGCAAGGCGGACGCCGGCGGGCTGGGCATCAGCATCAAAGGGGGCCGAGAGAACAAGATGCCCATTCTCATTTCCAAGATCTTCAAGGGGTTGGCAGCTGACCAGACAGAGGCTCTCTTCGTGGGGGATGCTATCCTGTCTGTGAATGGTGAAGACCTGTCCTCTGCCACCCATGACGAGGCAGTGCAAGCTCTCAAGAAGACAGGCAAGGAGGTAGTGCTGGAGGTCAAGTACATGAAGGAGGTCTCACCATATTTCAAGAACTCTGCCAGTGGGACTGCGGTTGGCTGGGACTCACCTCCTACTTCACCCCTTCAGCGGCAGCCTTCCTCCCCTGGCCCACAACCCCGCCACCTCAAGGAGGCCAAGCACGTGCCTTTGAAGATGGCATATGTCTCGAGGAGGTGCACCCCCTCTGACCCAGAGCCCAGGTACCTGGAGATCTGTGCAGCAGATGGCCAAGACACCTTCTTCTTGAGGGCCAAGGATGAAGCTACTGCGAGGTCATGGGCAGGTGCCATCCATGCCCAGATCAACGGTCTGATACCCTGGGTCAAGGACGAGCTGCAGGCACTCCTGGCAGCCTCAGGCACAGCTGGGAACCAGGACATCAAGCAGATTGGCTGGTTGACTGAACAGCTGCCTAGTGGGGGCTCAGCCCCAACCCTGGCCCTCCTGACTGAAAAGGAGCTGCTCCTCTACAGTGGTCTCCCCCAGACCCGGGAGGCCCTGAGCCGGCCAGCCCGCACTGCCCCACTCATCGCCACCAGGCTGGTGCACTCAGGCCCTTCCAAGGGCTCGGTACCTTATGACACAGAGCTCTCTTTTGCCCTACGCACGGGCACACGCCATGGTGTGGACACTCACCTGTTCAGCGTGGAGTCACCACAGGAGCTGGCTGCCTGGACCCGGCAGCTGGTAGATGGCTGTCACCGGGCTGCTGAAGGTGTGCAGGAGGTGTCTACAGCCTGCACGTGGAATGGCCGTCCCTGCAGCCTCTCTGTGCACATTGACAAAGGCTTCACACTGTGGGCAGCTGAGCCAGGGGCGGCTAGAGCTGTGCTGCTTCGACAGCCCTTTGAAAAGCTACAGATGTCCTCAGATGATGGTGCCAGTCTCCTTTTCCTGGACTTTGGGGGTGCTGAAGGCGAGATCCAGCTGGACCTGCACTCATGTCCCAAAACCATGGTCTTCATCATCCACTCCTTCCTCTCGGCCAAAGTCACCCGCCTGGGGCTCTTGGCCTAG

Related Sequences

XP_004867999.1 Protein

Snta1 PREDICTED: alpha-1-syntrophin [Heterocephalus glaber]

Length: 505 aa      View alignments
>XP_004867999.1
MASGRRAPRTGLLELSAGAGSGAGGERWQRVLLSLAEDALTVSPADGEPGPEPGASREPESAQLNGAAEPGAAPPQLPEALLLQRRRVTVRKADAGGLGISIKGGRENKMPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKKTGKEVVLEVKYMKEVSPYFKNSASGTAVGWDSPPTSPLQRQPSSPGPQPRHLKEAKHVPLKMAYVSRRCTPSDPEPRYLEICAADGQDTFFLRAKDEATARSWAGAIHAQINGLIPWVKDELQALLAASGTAGNQDIKQIGWLTEQLPSGGSAPTLALLTEKELLLYSGLPQTREALSRPARTAPLIATRLVHSGPSKGSVPYDTELSFALRTGTRHGVDTHLFSVESPQELAAWTRQLVDGCHRAAEGVQEVSTACTWNGRPCSLSVHIDKGFTLWAAEPGAARAVLLRQPFEKLQMSSDDGASLLFLDFGGAEGEIQLDLHSCPKTMVFIIHSFLSAKVTRLGLLA