Details from NCBI annotation

Gene Symbol Samhd1
Gene Name SAM domain and HD domain 1, transcript variant X2
Entrez Gene ID 101709493

Database interlinks

Part of NW_004624842.1 (Scaffold)

For more information consult the page for NW_004624842.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

SAMHD1 ENSCPOG00000007987 (Guinea pig)

Gene Details

SAM domain and HD domain 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000007189, Guinea pig)

Protein Percentage 80.91%
CDS Percentage 84.74%
Ka/Ks Ratio 0.3138 (Ka = 0.1228, Ks = 0.3914)

SAMHD1 ENSG00000101347 (Human)

Gene Details

SAM domain and HD domain 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000262878, Human)

Protein Percentage 82.39%
CDS Percentage 85.03%
Ka/Ks Ratio 0.24812 (Ka = 0.1038, Ks = 0.4185)

Samhd1 ENSMUSG00000027639 (Mouse)

Gene Details

SAM domain and HD domain, 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000059717, Mouse)

Protein Percentage 75.08%
CDS Percentage 77.14%
Ka/Ks Ratio 0.20133 (Ka = 0.1672, Ks = 0.8303)

Samhd1 ENSRNOG00000006418 (Rat)

Gene Details

SAM domain and HD domain, 1

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000008961, Rat)

Protein Percentage 73.93%
CDS Percentage 76.07%
Ka/Ks Ratio 0.20128 (Ka = 0.1787, Ks = 0.8876)

Genome Location

Sequence Coding sequence

Length: 1905 bp    Location: 2591064..2649746   Strand: +
>XM_004867815.1
ATGCAGAGATCCGACTCTGAGCAACCCTCTAAGCGGCCCCGATGCGATGGCAGCCCAAGAACTCCACCAAACACTCCCGCAGGGACGGACAGGCCCCCAGTCTTGGAACTCCATCCCGACCACCGGACGTGGGGCCCGGAGCAGGTGTGCTCCTACTTGGAGCATTGTGGCTTCTCAAAACCGGGACTGCTGAAAAACTTCCGAGATAATAAAATCACAGGTTTATTACTGCCCTTTCTCGATGAGTCTCTTCTTGAAAACCTTGGAGTAAGTTCCTTGGGGGAGAGGAAGAAACTGCTTAATTATATCCAACGATTGAGTCAAACTCACATTGAGACAATGAAGGTAATTAATGATCCTATCCATGGCCATATTGAGCTGCACCCTCTTCTTATGCGAATCATTGACACACCTCAATTTCAGCGGCTTCGATATATTAAACAGTTGGGAGGCGGCTACTATGTTTTTCCAGGAGCTTCACACAATCGATTTGAGCATAGTCTAGGGGTAGGGTATCTAGCAGGATGTCTAGTACGTGAACTGTGTGAAAAACAACCAGAACTGCAGATAAGTGAGCGAGATGTGCTCTGTGTTCAGATTGCCGGGCTTTGTCATGATCTTGGTCATGGGCCATTTTCTCATATGTTTGATGGAAGATTTATCCCACTCGCTCGACCAGAGGTGAAATGGACGCATGAACAGGGGTCAGTTCAGATGTTTGAGTATTTAGTTAATTCTAACGGTCTCAGAGCTATCATGGAACGCTATGGTCTAATCCCTGAGGAAGATATTTGTTTTATCAAGGAACAAATTGCAGGACCACTTGAATCACCGGTCAAAGATTTTTCGTGGCCATATAAAGGACGTCCTAAAGAGAAAAGCTTCCTTTATGAGATAGTGGCTAATAAAAGAAATGGCATTGATGTAGATAAGTGGGATTATTTTGCCAGGGACTGCCATCATCTTGGAATCCAAAATAATTTTGATTACAAGCGCTTTCTTAAGTTTGCCCGTGTCTGTGAAGTGGATAATAGGAAGCATATTTGCACTAGAGAAAAGGAGGTTGGCAATCTGTATGACATGTTCCACACACGCAACTGTTTACACCGCAGAGCTTATCAACATAAAGTCGGTAACATCATTGATACAATGATTACAGATGCTTTCCTCAAAGCAGACCCCTACATAGAGATTATAGGTGCTGAAGGGAAAAAATATCACATTTCTACAGCAATTGATGACATGGAAGCCTTCACCAAGCTGACAGATAACATTTTTCTGGAGATTTTACACTCTACTGATCCCAAATTGGATGCTGCACGAGAAGTTTTAAAAAATGTTGAATACCGTAATCTGTACAAATATGTGGGTGAGACCCAGCCTGGGAAACGAAAGATTAGAAAGGAAGATTACGAACACCTTCCAAAAGAGGTTGCTGACTCTAAACCTAAGGATATGGTCCTGGAGGCTGAAATGAAGGCTGAAGATTTCATAGTGGATGTCATCAACATGGATTACGGAATGGAAGACAAGAATCCAATTGATCATGTTCGCTTCTATTGTAAAAGTGACCCTCGCCGAGCAATCATGATTACTAGAAATCAGGTCTCACAGCTTCTGCCAGAGAGATTTGCAGAGCAGCTTATTCGTGTATATTGTAAGAAGAAGGATGGAAAGAGTTTGTTTGCTGCAAAACAGCACTTCGTTCAATGGTGTGCAGCCAATGACTTCACAAAGCCACAGGATGGTGATATTGTGGCCCCCCTTATAACACCTCGAAAACCAGAGTGGAATTACAGTCCAGCTCACCCCCCAGAAGCATCCAGATCCAGAGTCCAGCTGTTTAAGGATGATTCCACAGTGCATAAGGATGAGTCCATGTTGCTTGAGGACGACTTGATGTGA

Related Sequences

XP_004867872.1 Protein

Samhd1 PREDICTED: SAM domain and HD domain-containing protein 1 isoform X2 [Heterocephalus glaber]

Length: 634 aa      View alignments
>XP_004867872.1
MQRSDSEQPSKRPRCDGSPRTPPNTPAGTDRPPVLELHPDHRTWGPEQVCSYLEHCGFSKPGLLKNFRDNKITGLLLPFLDESLLENLGVSSLGERKKLLNYIQRLSQTHIETMKVINDPIHGHIELHPLLMRIIDTPQFQRLRYIKQLGGGYYVFPGASHNRFEHSLGVGYLAGCLVRELCEKQPELQISERDVLCVQIAGLCHDLGHGPFSHMFDGRFIPLARPEVKWTHEQGSVQMFEYLVNSNGLRAIMERYGLIPEEDICFIKEQIAGPLESPVKDFSWPYKGRPKEKSFLYEIVANKRNGIDVDKWDYFARDCHHLGIQNNFDYKRFLKFARVCEVDNRKHICTREKEVGNLYDMFHTRNCLHRRAYQHKVGNIIDTMITDAFLKADPYIEIIGAEGKKYHISTAIDDMEAFTKLTDNIFLEILHSTDPKLDAAREVLKNVEYRNLYKYVGETQPGKRKIRKEDYEHLPKEVADSKPKDMVLEAEMKAEDFIVDVINMDYGMEDKNPIDHVRFYCKSDPRRAIMITRNQVSQLLPERFAEQLIRVYCKKKDGKSLFAAKQHFVQWCAANDFTKPQDGDIVAPLITPRKPEWNYSPAHPPEASRSRVQLFKDDSTVHKDESMLLEDDLM