Sequence details NCBI ID: XM_004867809.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Rbl1
Gene Name retinoblastoma-like 1 (p107)
Entrez Gene ID 101707342

Database interlinks

Part of NW_004624842.1 (Scaffold)

For more information consult the page for NW_004624842.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RBL1 ENSCPOG00000001340 (Guinea pig)

Gene Details

retinoblastoma-like 1 (p107)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000001216, Guinea pig)

Protein Percentage 92.95%
CDS Percentage 93.11%
Ka/Ks Ratio 0.1911 (Ka = 0.0372, Ks = 0.1944)

RBL1 ENSG00000080839 (Human)

Gene Details

retinoblastoma-like 1 (p107)

External Links

Gene Match (Ensembl Protein ID: ENSP00000362768, Human)

Protein Percentage 92.21%
CDS Percentage 91.53%
Ka/Ks Ratio 0.13394 (Ka = 0.0376, Ks = 0.2806)

Rbl1 ENSMUSG00000027641 (Mouse)

Gene Details

retinoblastoma-like 1 (p107)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000029170, Mouse)

Protein Percentage 89.55%
CDS Percentage 86.97%
Ka/Ks Ratio 0.1018 (Ka = 0.0522, Ks = 0.5123)

Rbl1 ENSRNOG00000006921 (Rat)

Gene Details

retinoblastoma-like 1 (p107) (Rbl1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000063017, Rat)

Protein Percentage 88.81%
CDS Percentage 86.47%
Ka/Ks Ratio 0.09818 (Ka = 0.0553, Ks = 0.5634)

Genome Location

Sequence Coding sequence

Length: 3201 bp    Location: 2495238..2563421   Strand: +
Raw sequence   
>XM_004867809.1
ATGTTCGAGGACGCGCCCCACGCAGAGGGGGCGGCGGTGGTCGCCGCGGCCGGGGAGGCACTGCAGGCCTTGTGCCAGGAGCTGAACCTCGACGAGGAGAGCGCAGCCGAAGCCCTGGATGATTTCACCGCTATCCGGGGCAACTACAGCCTAGAGGGAGAAGTTATACACTGGTTGGCATGTTCATTATATGTTGCATGCCGCAAAAGCATTATTCCTACAGTTGGAAGGGGTATCATGGAAGGAAACTGTGTGTCACTCACCAGAATACTACGTTCAGCTAAATTAAGTTTAATACAGTTTTTTAGTAAAATGAAGAAGTGGATGGACATGTTAAATCTGCCGCAAGAATTTCGTGAACGTATAGAAAGGCTAGAGAGAAATTTTGAAGTATCTACTGTAATTTTTAAAAAATTTGAGCCAATTTTTTTAGATATATTTCAAAATCCATTTGAAGAGCTACCAAAATTACCAAGAAGTAGGAAACAGAGGAGGATTCCTTGCAGTGTTAAGGATCTCTTTAATTTCTGTTGGACACTGTTTGTTTACACTAAGGGTAATTTTCGTATGATTGGGGATGATTTAGTAAACTCTTATCATTTACTTCTGTGCTGCTTGGATCTTGTTTTTGCTAATGCCATAATGTGCCCAAATAGACAAGACTTGCTGAATCCATCATTTAAAGGTTTGCCATCTGATTTCCATACTGCTGACTTTAGGGCTTCTGAAGAGCCTCCCTGCATCATTGCTATACTGTGTGAACTGCATGATGGACTTCTAATAGAAGCAAAAGGGATAAAGGAGCACTACTTTAAACCATATATTGCAAAACTTTTTGATAGGAAGGTTTTAAAAGGAGAATGCCTCCTTGACCTCTCCAGTTTTACTGATAATAGCAAAGCAGTGAACAAGGAGTATGAAGAATATGTTCTAACTGTTGGTGACTTTGATGAGAGGATCTTTTTGGGAGCAGATGCAGAAGAGGAAATTGGAACGCCACGAAAATTCACTGGTGACACCCCATTAGGAAAACTGACAGCGCAAACTAATGTGGAGTGTAACCTTCAACAGCATTTCGAAAAAAAAAGATCATTTGCACCTTCTACCCCACTGACAGGAAGAGGATATTTACGAGAAAAAGAAACAGTCATTACTCCTGTTGCTTCAGCCACCCAAAGTGTGAGCCGTTTACAGACTATTGTGGCTGGACTGAAAAATGCACCAAGTAAACAACTTACAAATATTTTTGAATCTTGTATGCGGAATCCTATGGAAAACATTATGAAAATAGTGAAAGGAATTGGAGAGACTTTCTGCCAACGCTATACTCAATCAACAGATGAGCAGCCTGGATCTCACATAGACTTTGCTATAAACAGATTAAAATTGGCAGAAATTTTGTATTATAAAATACTAGAGACTGTAATGGCTCAGGAAGCACGAAGACTTCATGGAATGGACATGTCAGTTCTTTTAGAGCAAGATATATTTCATCGTTCTTTGATGGCTTGTTGTTTAGAAATTGTGCTTTTTGCCTATAGTTCACCACGTACTTTTCCTTGGATTATTGAAATTCTCAACTTACAGCCATTTTATTTTTATAAGGTTATTGAGGTGGTGATTCGCTCAGAGGAGGGACTCTCCAGGGACATGGTGAAACACCTGAACAGCATTGAAGAACAGATTTTAGAGAGTTTAGCATGGAGTCACAATTCTGCTCTGTGGGAAGCTCTCTTGGCTTCTGGAAACAAAATCCCTACCTGTGAAGAAGTTATATTTCCAAATAACTTTGAAACAGGAAATGGAGGAAATGTACAGGGACATCTTCCCATGATGCCAATGTCTCCTATAATCCATCCAAGAGTCAAGGAAGTTCGGACAGACAGTGGGGGTCTTCGAAGGGATATACAACCACTGTCTCCAATTTCTGTCCATGAACGCTACAGTTCTCCAACTGCTGGGAGTGCTAAGAGAAGACTTTTTGGAGAGGATCCCCCAAAAGAAATGCTTATGGACAAGATTATAACAGAAGGGACAAAATTGAAAATTGCTCCTTCAAGCATCATTGTTGAAAATATATCAGTTTCACCTGGGCAAATTCTAACAATGTCCACAGCCACAGTAGCAGGGACAACGGGACACAAAGTTACAGTTCCATTGCATGGTGTTGCAAATGATTCAGGGGAGATCACACTGATTCCTATTTCCATGAATACAAGTCAAGAGCCCAAAATTGAGAGTCCTGTGTCACTCACTGCACAGTCATTAACTAGTGCTTCTCCAAAACAAACCTATTTGATTAAAACACAAGAGATTCATCTGACTGGAATAAACAAACCAAAGAGAACTGGGTCTTTAGCACTATTTTACAGAAAGGTCTATCATTTGGCAAGTGTACGCTTACGTGATTTATGTTTAAAACTGGATGTTTCGAATGAATTACGAAGGAAGATATGGACATGTTTTGAATTCACTTTAGTTCACTGCCCTGATTTAATGAAAGACAGGCATTTGGATCAGCTCCTCCTTTGTGCCTTTTACATCATGGCAAAGGTAACAAAAGAAGAAAGAACTTTTCAAGAAATAATGAAAAGTTATAGGAATCAGCCCCAAGCTAATAGTCACGTATATAGAAGCGTTCTGTTGAAAAGTATTCCAAGAGAAATTGTGACATATAATAATGATATAAGTGATGATTTTGAAATGACAGATGGTGACTTGGAAGAGGCCACAAAAACAACTGACTGTTCTAGTGGACCAGTGAAAGAAGAAAGAGGCGACCTTATCAAATTTTACAATACAATATATGTAGGAAGAGTGAAGTCATTTGCATTAAAATATGACTTATCAAATCAGGACCATGTGGTGGATGCTCCACCACTATCTCCTTTTCCACATATTAAGCAACAGCCAGGCTCACCGCGCCGCATTTCCCAGCAGCACTCCATTTATGTTTCCCCACACAAGAATGGATCGGGCCTTACACCGAGGAGTGCTCTACTGTACAAGTTCAACGGCAGCCCTTCTAAGAGTTTGAAAGATATCAATAACATGATAAGGCAAGGTGATCAGCGAACCAAGAAGCGTGCAATAGCCATCAGCGGAGATGCAGAATCACCTGCCAAACGCCTCTGCCAAGAAAATGATGATGTTTTGCTTAAACGACTACAGGATGTTGTCAGTGAAAGAGCAAACCATTAA

Related Sequences

XP_004867866.1 Protein

Rbl1 PREDICTED: retinoblastoma-like protein 1 [Heterocephalus glaber]

Length: 1066 aa      View alignments
>XP_004867866.1
MFEDAPHAEGAAVVAAAGEALQALCQELNLDEESAAEALDDFTAIRGNYSLEGEVIHWLACSLYVACRKSIIPTVGRGIMEGNCVSLTRILRSAKLSLIQFFSKMKKWMDMLNLPQEFRERIERLERNFEVSTVIFKKFEPIFLDIFQNPFEELPKLPRSRKQRRIPCSVKDLFNFCWTLFVYTKGNFRMIGDDLVNSYHLLLCCLDLVFANAIMCPNRQDLLNPSFKGLPSDFHTADFRASEEPPCIIAILCELHDGLLIEAKGIKEHYFKPYIAKLFDRKVLKGECLLDLSSFTDNSKAVNKEYEEYVLTVGDFDERIFLGADAEEEIGTPRKFTGDTPLGKLTAQTNVECNLQQHFEKKRSFAPSTPLTGRGYLREKETVITPVASATQSVSRLQTIVAGLKNAPSKQLTNIFESCMRNPMENIMKIVKGIGETFCQRYTQSTDEQPGSHIDFAINRLKLAEILYYKILETVMAQEARRLHGMDMSVLLEQDIFHRSLMACCLEIVLFAYSSPRTFPWIIEILNLQPFYFYKVIEVVIRSEEGLSRDMVKHLNSIEEQILESLAWSHNSALWEALLASGNKIPTCEEVIFPNNFETGNGGNVQGHLPMMPMSPIIHPRVKEVRTDSGGLRRDIQPLSPISVHERYSSPTAGSAKRRLFGEDPPKEMLMDKIITEGTKLKIAPSSIIVENISVSPGQILTMSTATVAGTTGHKVTVPLHGVANDSGEITLIPISMNTSQEPKIESPVSLTAQSLTSASPKQTYLIKTQEIHLTGINKPKRTGSLALFYRKVYHLASVRLRDLCLKLDVSNELRRKIWTCFEFTLVHCPDLMKDRHLDQLLLCAFYIMAKVTKEERTFQEIMKSYRNQPQANSHVYRSVLLKSIPREIVTYNNDISDDFEMTDGDLEEATKTTDCSSGPVKEERGDLIKFYNTIYVGRVKSFALKYDLSNQDHVVDAPPLSPFPHIKQQPGSPRRISQQHSIYVSPHKNGSGLTPRSALLYKFNGSPSKSLKDINNMIRQGDQRTKKRAIAISGDAESPAKRLCQENDDVLLKRLQDVVSERANH