Details from NCBI annotation

Gene Symbol Rprd1b
Gene Name regulation of nuclear pre-mRNA domain containing 1B, transcript variant X1
Entrez Gene ID 101699448

Database interlinks

Part of NW_004624842.1 (Scaffold)

For more information consult the page for NW_004624842.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

RPRD1B ENSCPOG00000012751 (Guinea pig)

Gene Details

regulation of nuclear pre-mRNA domain containing 1B

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011474, Guinea pig)

Protein Percentage 99.69%
CDS Percentage 97.14%
Ka/Ks Ratio 0.01251 (Ka = 0.0014, Ks = 0.1121)

RPRD1B ENSG00000101413 (Human)

Gene Details

regulation of nuclear pre-mRNA domain containing 1B

External Links

Gene Match (Ensembl Protein ID: ENSP00000362532, Human)

Protein Percentage 100.0%
CDS Percentage 94.79%
Ka/Ks Ratio 0.001 (Ka = 0.0002, Ks = 0.2211)

Rprd1b ENSMUSG00000027651 (Mouse)

Gene Details

regulation of nuclear pre-mRNA domain containing 1B

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000099412, Mouse)

Protein Percentage 99.69%
CDS Percentage 92.62%
Ka/Ks Ratio 0.00438 (Ka = 0.0014, Ks = 0.3272)

Rprd1b ENSRNOG00000012923 (Rat)

Gene Details

regulation of nuclear pre-mRNA domain containing 1B (Rprd1b), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017265, Rat)

Protein Percentage 99.39%
CDS Percentage 93.46%
Ka/Ks Ratio 0.01035 (Ka = 0.0029, Ks = 0.2762)

Genome Location

Sequence Coding sequence

Length: 981 bp    Location: 1629878..1573064   Strand: -
>XM_004867787.1
ATGTCCTCCTTCTCCGAGTCGGCGCTGGAGAAGAAGCTCTCGGAGCTGAGCAACTCTCAGCAGAGCGTGCAGACTCTATCTCTGTGGCTCATACACCACCGCAAGCACGCAGGACCAATCGTCTCTGTGTGGCATCGCGAGCTCCGCAAAGCCAAATCAAATAGAAAGCTTACTTTTCTGTACTTAGCAAATGATGTGATCCAAAACAGTAAAAGGAAAGGACCTGAATTCACTAGAGAATTTGAATCTGTCCTTGTGGATGCCTTTTCTCATGTTGCCAGAGAGGCAGATGAAGGCTGTAAAAAACCTTTAGAAAGATTGCTGAACATCTGGCAAGAAAGAAGTGTGTATGGCGGCGAGTTCATACAGCAGCTGAAGCTGTCTATGGAGGACTCCAAGAGCCCTCCCCCCAAAGCAACAGAGGAGAAGAAATCTCTGAAACGAACTTTTCAGCAAATACAAGAGGAAGAGGATGATGACTATCCTGGAAGCTACTCTCCCCAAGATCCTTCTGCAGGACCCCTCTTGACTGAAGAACTAATCAAAGCTTTGCAGGATCTTGAAAATGCTGCGTCAGGGGATGCAACTGTTCGACAGAAAATTGCTTCTCTTCCCCAAGAAGTGCAAGATGTTTCTCTCTTGGAAAAAATAACAGACAAAGAGGCAGCTGAACGTCTTTCAAAAACAGTAGATGAAGCATGTCTGTTACTAGCAGAATATAACGGGCGCCTGGCAGCAGAACTGGAAGACCGGCGCCAGCTGGCTCGGATGTTGGTGGAGTACACCCAGAATCAGAAAGATGTTTTGTCAGAAAAAGAGAAAAAGCTAGAAGAATATAAACAGAAGCTCGCACGAGTAACCCAGGTCCGCAAGGAACTGAAGTCCCATATTCAGAGCTTACCAGACCTCTCACTGCTGCCCAACGTCACAGGGGGATTGGCCCCTCTGCCCTCTGCTGGTGACCTCTTTTCAACTGATTAG

Related Sequences

XP_004867844.1 Protein

Rprd1b PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1B isoform X1 [Heterocephalus glaber]

Length: 326 aa      View alignments
>XP_004867844.1
MSSFSESALEKKLSELSNSQQSVQTLSLWLIHHRKHAGPIVSVWHRELRKAKSNRKLTFLYLANDVIQNSKRKGPEFTREFESVLVDAFSHVAREADEGCKKPLERLLNIWQERSVYGGEFIQQLKLSMEDSKSPPPKATEEKKSLKRTFQQIQEEEDDDYPGSYSPQDPSAGPLLTEELIKALQDLENAASGDATVRQKIASLPQEVQDVSLLEKITDKEAAERLSKTVDEACLLLAEYNGRLAAELEDRRQLARMLVEYTQNQKDVLSEKEKKLEEYKQKLARVTQVRKELKSHIQSLPDLSLLPNVTGGLAPLPSAGDLFSTD