Details from NCBI annotation

Gene Symbol Lrit1
Gene Name leucine-rich repeat, immunoglobulin-like and transmembrane domains 1
Entrez Gene ID 101706242

Database interlinks

Part of NW_004624841.1 (Scaffold)

For more information consult the page for NW_004624841.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

LRIT1 ENSCPOG00000015393 (Guinea pig)

Gene Details

leucine-rich repeat, immunoglobulin-like and transmembrane domains 1

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000013878, Guinea pig)

Protein Percentage 84.55%
CDS Percentage 87.91%
Ka/Ks Ratio 0.15515 (Ka = 0.0777, Ks = 0.501)

LRIT1 ENSG00000148602 (Human)

Gene Details

leucine-rich repeat, immunoglobulin-like and transmembrane domains 1

External Links

Gene Match (Ensembl Protein ID: ENSP00000361177, Human)

Protein Percentage 78.18%
CDS Percentage 81.49%
Ka/Ks Ratio 0.15008 (Ka = 0.1199, Ks = 0.7986)

Lrit1 ENSMUSG00000041044 (Mouse)

Gene Details

leucine-rich repeat, immunoglobulin-like and transmembrane domains 1

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000113964, Mouse)

Protein Percentage 80.29%
CDS Percentage 79.64%
Ka/Ks Ratio 0.0979 (Ka = 0.1031, Ks = 1.0535)

Lrit1 ENSRNOG00000012790 (Rat)

Gene Details

leucine-rich repeat, immunoglobulin-like and transmembrane domains 1 (Lrit1), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000017773, Rat)

Protein Percentage 80.46%
CDS Percentage 80.24%
Ka/Ks Ratio 0.10887 (Ka = 0.1024, Ks = 0.9403)

Genome Location

Sequence Coding sequence

Length: 1848 bp    Location: 2790326..2799402   Strand: +
>XM_004867734.1
ATGTGGGCGGCCGTGGGCCTGCTCTGGGTCCTGGCCCTTGGGGGGCCCCACCAGGCCTGGTGCTCCTGCCCCTCTCAGTGCAGCTGCAGCCTCCACATCCTGAGTGACGGCAGCAAGGCCAGGACGGTGGTGTGCAGCTACTCCGACATGACCCTGCCGCCTGCCTCCCTCCCCACGGACACGTGCAGGCTGCGCCTGGAGCGCACAGCCATGCGCAGGGTGACAGCCGAGGCCTTCCGGTCGCTGGGCCGCCTGGAGCAGCTCTGGCTGCCCTACAACGCGCTGGGAGAGCTCAGCGCGCTCATGCTGCGAGGCCTGCGGCGCCTGCGCGAGCTGCGGCTGCCGGGGAACCGCCTGATAGCCTTCCCCTGGGCTGCGCTCAGGGACGCCCCCGAGTTGCGGCTGCTGGACCTGCAGGCCAACCGCCTGGCTGCCGTGCCTCCTGAGGCTGCGCGCTTCCTGGGCAATCTCACCTTCCTGGACCTCTCCAGCAACCAGCTGATGAGGCTTCCGCAGGAGCTGCTGCTCACCTGGGCGCACCTGAAGACCAGACCTTTCCTGCCTAGCCTCCACGCCAGGCTGGTCCTAGGGCTTCAGGACAACCCCTGGGCATGTGACTGCCGGCTCTATGAGCTGGTCCATCTCCTGGATGGCTGGGCCCCAAACTTGGTCTTCATTGAGACCAGACTGAGGTGTGCCAGCCCACGTAACCTGGCCGGAGTGGCCTTCAGCCAGCTGGAGCTGAGGAAGTGCCAAGGTCCCCAGCTCCGTCCAGGGGCGACCAGCATCAGGTCCCCTTTGGGTAGCTCTGTATTGCTACACTGTGGAGCCACTGGGGTCCCTGGGCCCGAGATGAGCTGGAGAAGAGCCAGTGGGCGCCCACTCAATGGCACAGTGCACCAGGAAATCTCCAGTGATGGCTCAAGCTGGACTCTCCTGGACCTGCCCACCGTGTCTCATTTTGATTCCGGAGACTACGTCTGCCAGGCCAAGAACTTCCTGGGGGCCTCAGAGACTATCATCTCCCTGATTGTCACTGAGCCCCAGACTCCTACAGAAGACAGTAGGAGCTCAGGGGCGCGGTGGACAAGGACAGGCGACAGGGCAGAGGCTGCTGTTTACAACAACAAGCTGGTGGCCAGGCACGTGCCCCATGTGCCTGAGCCTGCCGTGCTGGCTGCCAGGCCCTCTGTGCCCAGCGTGAAGGAGGAGCTGGCCCTCCAGTACTTCCAGATGGGCGAGCTGGGGGCGCTGTCGGAGGGGAAGGAGGCGCGCATGGTGAGGTCGCTCAAGGTGGTGGGGGACACCTACAACAGTGTGTCCCTGGTGTGGAAGGCCCCCCAGGCTGGGAACACAACGGCCTTCAACGTCCTCTACACTGTCTTCGGGCAGCGAGACATGCGGCGGGTGACAGTGCAGCCGGGCATGACCACCGTCACCATCGAGGGGCTGGCGCCCAAGACCAAGTACGTCGCGTGCGTGTGCACGCGGGGCCAGGTGCCGCGCAAGGAGCAGTGCGTCATCTTCTCCACTGACCAGATAGCGGATGCCCAGGGCACCCAGAGGCTCATCAACATAGTGGTGATCAGCGTGGCGGCCACCATCGCCCTGCCGCCCACGCTGTCTGTGTGCTGCGGGGCGCTCCGCAGGCGCTGTCGCAAGTGTCTCACGAGAGGCTCTGGCGAGGCAACGGACGCCTACGTGCACCTGGAGAGGCTGGCTCACAGTGAGGACTGCTCGGAGGAGCTGTCCAGGCAAAGCCTCAGTGGAGAGGCCGACAGGCTCCTCTCTGCGCGCTCCAGTCTGGACTCGAAGGCGGGCAGACGCATCAATGAGTACTTCTGCTGA

Related Sequences

XP_004867791.1 Protein

Lrit1 PREDICTED: leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1 [Heterocephalus glaber]

Length: 615 aa      View alignments
>XP_004867791.1
MWAAVGLLWVLALGGPHQAWCSCPSQCSCSLHILSDGSKARTVVCSYSDMTLPPASLPTDTCRLRLERTAMRRVTAEAFRSLGRLEQLWLPYNALGELSALMLRGLRRLRELRLPGNRLIAFPWAALRDAPELRLLDLQANRLAAVPPEAARFLGNLTFLDLSSNQLMRLPQELLLTWAHLKTRPFLPSLHARLVLGLQDNPWACDCRLYELVHLLDGWAPNLVFIETRLRCASPRNLAGVAFSQLELRKCQGPQLRPGATSIRSPLGSSVLLHCGATGVPGPEMSWRRASGRPLNGTVHQEISSDGSSWTLLDLPTVSHFDSGDYVCQAKNFLGASETIISLIVTEPQTPTEDSRSSGARWTRTGDRAEAAVYNNKLVARHVPHVPEPAVLAARPSVPSVKEELALQYFQMGELGALSEGKEARMVRSLKVVGDTYNSVSLVWKAPQAGNTTAFNVLYTVFGQRDMRRVTVQPGMTTVTIEGLAPKTKYVACVCTRGQVPRKEQCVIFSTDQIADAQGTQRLINIVVISVAATIALPPTLSVCCGALRRRCRKCLTRGSGEATDAYVHLERLAHSEDCSEELSRQSLSGEADRLLSARSSLDSKAGRRINEYFC