Sequence details NCBI ID: XM_004867696.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tlr6
Gene Name toll-like receptor 6, transcript variant X2
Entrez Gene ID 101718313

Database interlinks

Part of NW_004624840.1 (Scaffold)

For more information consult the page for NW_004624840.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TLR6 ENSCPOG00000005088 (Guinea pig)

Gene Details

toll-like receptor 6

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004576, Guinea pig)

Protein Percentage 83.14%
CDS Percentage 88.47%
Ka/Ks Ratio 0.43516 (Ka = 0.097, Ks = 0.2229)

TLR6 ENSG00000174130 (Human)

Gene Details

toll-like receptor 6

External Links

Gene Match (Ensembl Protein ID: ENSP00000389600, Human)

Protein Percentage 76.73%
CDS Percentage 83.4%
Ka/Ks Ratio 0.39175 (Ka = 0.1432, Ks = 0.3655)

Tlr6 ENSMUSG00000051498 (Mouse)

Gene Details

toll-like receptor 6

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000062096, Mouse)

Protein Percentage 71.54%
CDS Percentage 76.83%
Ka/Ks Ratio 0.28079 (Ka = 0.1888, Ks = 0.6724)

Tlr6 ENSRNOG00000002161 (Rat)

Gene Details

toll-like receptor 6 (Tlr6), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000002933, Rat)

Protein Percentage 70.91%
CDS Percentage 76.66%
Ka/Ks Ratio 0.31195 (Ka = 0.1993, Ks = 0.6389)

Genome Location

Sequence Coding sequence

Length: 2427 bp    Location: 7352420..7323050   Strand: -
Raw sequence   
>XM_004867696.1
ATGACCCAAGACAAAGAACCTGTTATTGGAACCGTTTATTTAGTTTGCATCCTGACCTTAATAGTTGGAACCATAACCCACATCTGTGAAGAAAGTGAATTTGAAGTGTGCATGTCAAAAAATAACCTTACTCGAATTCCAAAAAACCTGCTGCCCACAACCAAAAGCTTAGATATATCTCAAAACTACATATCTGAGCTTCAGATCTCTGACATCAGCTTTTTGTCAGGGCTGAAAGTTCTGAAAGTTTCCCATAATAGAATCCAGAGACTGGATTTGAGTGTTTTCAAGTTCAATCAGGATTTAGAGCATTTGGATTTATCTCATAATCAGCTGCAAAAGATGTCCTGCTACCCTGTGGTGAGTCTGAAGCATCTAGACCTCTCATTCAATGACTTTGATGTGCTGCCCATATGTATGGAATTTGGCAACTTGACACAACTTAATTTCCTAGGATTAAGTGCTGCGAGGTTTCAACAAATAGATCTGCTACCGGTTGCTCACTTGCATCTAAATTACATTCTTCTGGTTTTGGGAGATTATTATAAGGAAAATGTAAGAGAAAAGCTTCAAATTCTGAATACAAAAACACTTCACTTTGTTTTTCACCCAAAAAGTTTATTCTCTGTTCAGGTGAACATATCAGTTAATACTTTGGGGTGTTTACAACTGACTAATATTAAATTGAATGATGAGAACTGTCAAGTTTTTGTTAAATTTTTATTAGGACTCATTAGAGGTCCAATGTTACTGAATCTTACTCTCAATCATATAGAAGCCCCTTGGAAATGCTTGGTTGAAATTTTTCAATTCCTTTGGCCCAGACCCGTGGAATGCCTCAATATTTACAATTTAACATTAGATGAAGTTGTTGATGATATACAAGTCACTTATCCAGAAACAACATTGAAAGCCTTGAAAATAGAGCATATTACAAAGCGAGTTTTTATTTTTTCACAGACTGTATTATACAAAGTGTTTTCTGAGATGAATATTATGATGTTAACCATATCAGAGACACCTTTTATTCACATGCTTTGTCCTAGAACATCCAGCACATTTAAGTTTTTGAACTTCACTCAAAATGTGTTCACAGATAGTGTTTTTGACACATGTTCCACTTTGGTGAGACTGGAGACACTTATTTTGCAAAAGAATAGTTTAAAAGACCTTTTTAAAGTAAGCCTTATGACTGAAAATATGCTATCTTTAGAAACACTGGATGTTAGCTGGAATTCTCTGGAATCTCATAGATATGAAGAAAATTGCACTTGGGCTAAGAGTATAGTGGTATTAAATTTGTCTTCAAATTCACTTACTGATTCTGTATTCAGATGTTTGCCTCCCAAGGTCAAGGTACTTGATCTTCACAACAATAGAATAACCAGCATCCCTAAGAATGTCACCCATCTAGAAGCTTTGCAAGAACTCAACATTGCTTTCAATTCTTTAACCGACCTTCCTGGATGTGGTACCTTTAGCAGCCTTTCTGCACTGATCATTGACCATAATTCAGTTTCCCACCCATCAGCTGATTTCTTCCAGAGCTGCCAGAAGATTAGGTCAATGAAAGCAGGGAACAACCCATTCCAATGCACATGTGAGTTAAGAGAGTTCATCAAAAATATAGATCAAGTGTCAAGTAAAGTAGCATGGGACTGGCCTGATTCTTTCAAGTGTGACTATCCAGAAAGCTCTAAGGGAATCCTGCTAAAGGACTTCCATGTGTCTCCACTATCCTGCAGCCCCACTCTGCTTATTCTTACCATTGTGACCACCATGCTGGTGTTGGCTGCTACTGTGACCTTCCTCTGCTGCTACTTCGATTTGCCCTGGTATCTCAGGATGATGTGTCAGTGGACCCAGACCCGGCACAGGGCTAGGAACATCCACTTGGAGGAACTCCAAGGAACTCTCCAATTTCATGCTTTTATCTCATACAGTGAACCTGATTCTGCCTGGGTAAAAAATGAATTACTACCAAACCTAGAAAAAGAAAATTTACAGATCTGCCTCCATGAGAGGAACTTTGTTCCTGGCAAGAGCATTTTGGAAAATATCATAAATTGCATTGAGAAGAGTTACAAGTCCATCTTTGTTTTGTCTCCCAACTTTATCCAGAGTGAGTGGTGCCATTATGAACTCTACTTTGCCCACCACCAGCTCTTCCATAAAGGGTCTAACAACTTAATCCTGATCTTACTGGAACCCATTCCTCAGAACAACATTCCCAGCAAGTATCACAGGCTGAGGGCTCTCATGGCACAGCGGACTTACCTGGAATGGCCCACAGAGAAGAGCAAACATGCACTTTTTTGGGCTAACATTAGAGCTGCTTTTAATATTAAATTAACACTAGCCACTGACAACAATGATGTGAAAACTTTAAAAAGCCAGGAAATTCAACTTAAGAGACTCAGACTCTGA

Related Sequences

XP_004867753.1 Protein

Tlr6 PREDICTED: toll-like receptor 6 isoform X2 [Heterocephalus glaber]

Length: 808 aa      View alignments
>XP_004867753.1
MTQDKEPVIGTVYLVCILTLIVGTITHICEESEFEVCMSKNNLTRIPKNLLPTTKSLDISQNYISELQISDISFLSGLKVLKVSHNRIQRLDLSVFKFNQDLEHLDLSHNQLQKMSCYPVVSLKHLDLSFNDFDVLPICMEFGNLTQLNFLGLSAARFQQIDLLPVAHLHLNYILLVLGDYYKENVREKLQILNTKTLHFVFHPKSLFSVQVNISVNTLGCLQLTNIKLNDENCQVFVKFLLGLIRGPMLLNLTLNHIEAPWKCLVEIFQFLWPRPVECLNIYNLTLDEVVDDIQVTYPETTLKALKIEHITKRVFIFSQTVLYKVFSEMNIMMLTISETPFIHMLCPRTSSTFKFLNFTQNVFTDSVFDTCSTLVRLETLILQKNSLKDLFKVSLMTENMLSLETLDVSWNSLESHRYEENCTWAKSIVVLNLSSNSLTDSVFRCLPPKVKVLDLHNNRITSIPKNVTHLEALQELNIAFNSLTDLPGCGTFSSLSALIIDHNSVSHPSADFFQSCQKIRSMKAGNNPFQCTCELREFIKNIDQVSSKVAWDWPDSFKCDYPESSKGILLKDFHVSPLSCSPTLLILTIVTTMLVLAATVTFLCCYFDLPWYLRMMCQWTQTRHRARNIHLEELQGTLQFHAFISYSEPDSAWVKNELLPNLEKENLQICLHERNFVPGKSILENIINCIEKSYKSIFVLSPNFIQSEWCHYELYFAHHQLFHKGSNNLILILLEPIPQNNIPSKYHRLRALMAQRTYLEWPTEKSKHALFWANIRAAFNIKLTLATDNNDVKTLKSQEIQLKRLRL