Details from NCBI annotation

Gene Symbol Pitx2
Gene Name paired-like homeodomain 2, transcript variant X1
Entrez Gene ID 101722303

Database interlinks

Part of NW_004624838.1 (Scaffold)

For more information consult the page for NW_004624838.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

PITX2 ENSCPOG00000009459 (Guinea pig)

Gene Details

paired-like homeodomain 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000008491, Guinea pig)

Protein Percentage 82.02%
CDS Percentage 83.28%
Ka/Ks Ratio 0.15169 (Ka = 0.1171, Ks = 0.7721)

PITX2 ENSG00000164093 (Human)

Gene Details

paired-like homeodomain 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000304169, Human)

Protein Percentage 96.9%
CDS Percentage 90.61%
Ka/Ks Ratio 0.01762 (Ka = 0.0127, Ks = 0.7225)

Pitx2 ENSMUSG00000028023 (Mouse)

Gene Details

paired-like homeodomain transcription factor 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000047359, Mouse)

Protein Percentage 95.98%
CDS Percentage 89.89%
Ka/Ks Ratio 0.02344 (Ka = 0.0169, Ks = 0.7192)

Pitx2 ENSRNOG00000010681 (Rat)

Gene Details

paired-like homeodomain 2 (Pitx2), transcript variant 2, mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000046259, Rat)

Protein Percentage 95.36%
CDS Percentage 89.47%
Ka/Ks Ratio 0.02618 (Ka = 0.0194, Ks = 0.7417)

Genome Location

Sequence Coding sequence

Length: 975 bp    Location: 4876776..4872315   Strand: -
>XM_004867586.1
ATGGACTGCATGAAAGGCCCGCTGCACTTGGAGCACCGCGCCGCCGGGGCCAAGCTGCCGGCCGCCTCCGCGTCGCCCTCCTGTCACCACCCCCAGCCCTTAGCAATGGCCTCGCTTCTGGCCCCGGGCCAGCCCCGCTCCCTGGACTCCAAACACCGGCTGGAGGTGCACACGATCTCCGACACCTCCAGCCCCGAGGCCGCAGAGAAAGACAAGAGCCAACAGGGCAAGAATGAGGACGTGGGCGCCGAGGACCCGTCCAAGAAGAAGAGGCAGCGGCGGCAGCGGACTCACTTTACCAGCCAACAGCTACAGGAGCTGGAAGCCACTTTCCAGAGGAACCGCTACCCAGATATGTCCACGCGAGAAGAAATCGCCGTGTGGACCAACCTCACGGAAGCCCGAGTCAGGGTTTGGTTCAAGAATCGCAGGGCCAAATGGAGAAAGCGGGAGCGCAACCAGCAGGCCGAGTTGTGCAAAAACGGCTTCGGGCCGCAGTTCAACGGGCTGATGCAGCCCTACGACGACGTGTACCCGGGCTACTCCTACAACAACTGGGCCGCCAAGGGCCTCACGCCGGCCTCCCTGTCCAGCAAAAGCTTCCCCTTCTTCAACTCCATGAACGTCAATCCCCTGTCCTCGCAGAGCATGTTCTCCCCGCCCAACTCCATCTCGTCCATGAGCATGCCGTCCAGCATGGTGCCCTCGGCGGTGACCGGCGTCCCGGGCTCCAGCCTCAACAGCCTCAACAACTTGAACAACCTGAGCAGCCCGTCGCTGAATTCCGCGGTGCCGACGCCCGCCTGTCCCTACGCGCCGCCGACGCCCCCGTACGTTTACAGGGACACGTGTAACTCCAGCCTGGCCAGCCTGAGACTGAAAGCCAAGCAACACTCCAGCTTCGGCTACGCCAGCGTGCAGAACCCCGCGTCCAACCTGAGTGCTTGTCAGTACGCGGTGGACCGGCCCGTGTGA

Related Sequences

XP_004867643.1 Protein

Pitx2 PREDICTED: pituitary homeobox 2 isoform X1 [Heterocephalus glaber]

Length: 324 aa      View alignments
>XP_004867643.1
MDCMKGPLHLEHRAAGAKLPAASASPSCHHPQPLAMASLLAPGQPRSLDSKHRLEVHTISDTSSPEAAEKDKSQQGKNEDVGAEDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKRERNQQAELCKNGFGPQFNGLMQPYDDVYPGYSYNNWAAKGLTPASLSSKSFPFFNSMNVNPLSSQSMFSPPNSISSMSMPSSMVPSAVTGVPGSSLNSLNNLNNLSSPSLNSAVPTPACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYASVQNPASNLSACQYAVDRPV