Sequence details NCBI ID: XM_004867541.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tmtc3
Gene Name transmembrane and tetratricopeptide repeat containing 3
Entrez Gene ID 101696722

Database interlinks

Part of NW_004624837.1 (Scaffold)

For more information consult the page for NW_004624837.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMTC3 ENSCPOG00000012492 (Guinea pig)

Gene Details

transmembrane and tetratricopeptide repeat containing 3

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000011240, Guinea pig)

Protein Percentage 95.39%
CDS Percentage 94.52%
Ka/Ks Ratio 0.13369 (Ka = 0.0231, Ks = 0.1727)

TMTC3 ENSG00000139324 (Human)

Gene Details

transmembrane and tetratricopeptide repeat containing 3

External Links

Gene Match (Ensembl Protein ID: ENSP00000266712, Human)

Protein Percentage 91.35%
CDS Percentage 90.54%
Ka/Ks Ratio 0.14224 (Ka = 0.046, Ks = 0.3236)

Tmtc3 ENSMUSG00000036676 (Mouse)

Gene Details

transmembrane and tetratricopeptide repeat containing 3

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000061470, Mouse)

Protein Percentage 90.14%
CDS Percentage 85.8%
Ka/Ks Ratio 0.09082 (Ka = 0.054, Ks = 0.5944)

Tmtc3 ENSRNOG00000006749 (Rat)

Gene Details

transmembrane and tetratricopeptide repeat containing 3 (Tmtc3), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000037617, Rat)

Protein Percentage 90.03%
CDS Percentage 86.6%
Ka/Ks Ratio 0.10058 (Ka = 0.0535, Ks = 0.5324)

Genome Location

Sequence Coding sequence

Length: 2745 bp    Location: 7139023..7186820   Strand: +
Raw sequence   
>XM_004867541.1
ATGGCTGATATTAACCTCAAAGAAGTAACCTTAATAGTAGGTGTGGTTATTGCCTGCTACTGGAACAGCCTATTCTGTGGTTTTGTTTTTGATGATGTTTCAGCAATACTGGATAATAAAGATCTGCATCCATCTACACCTTTAAAAACTTTATTTCAGAATGATTTCTGGGGAACCCCTATGTCCGAGGAGAGAAGTCACAAGTCCTACCGACCCTTAACAGTATTGACATTTCGCTTAAATTATATGTTTAGTGAACTAAACCCAATGTCATATCATCTCCTAAATATGATTTTTCATGCTATGGTTAGTGTGGTATTTCTTAAAGTCTGCAAACTTTTTCTGGACAACAAGAGCGGTCTGATTGCTGCTCTGCTTTTTGTAGTGCACCCCGTACATACAGAAGCAGTAACAGGTGTTGTAGGAAGAGCAGAACTTTTGTCATCTATCTTTTTTCTAGCTGCATTTTTGTCATATACAAAATCAAAAGGACCAGATAATTCCATAGTGTGGACTCCAATTGCATTGACAGTGATTTTAGTGGCTATTGCAACACTGTGTAAAGAACAAGGCATAACAGTTGTGGGAATATGTTGTGTATACGAAGTATTTATTGCCCAGGGGTATACTTTGCCATTATTGTGTACTACTGCTGCACAGTTTCTCCGTGGAAAGAGTAGTATTCCATTTTGTCTGCTACAGACACTAATAAAACTGATTGTCTTGATATTCAGTACATTATTACTTGTGGTAATTAGAGTCCAGGTTATTCAGTCCCAGCTTCCAGTATTTACAAGATTTGATAACCCAGCTGCTGTAAGTCCAACTCCTACAAGGCAGCTAACATTTAACTACCTTCTTCCTGTGAATGCTTGGCTTCTATTAAATCCTTCAGATCTCTGCTGTGATTGGACCATGGGAACAATACCACTAATAGAGTCATTTCTAGATATTCGAAATCTTGCCACTTTTGCTTTCTTTTGCTTTCTGGGGGTTTTGGGAATATTCAGTCTCCGGTACCCTGGTGATTCCTCAAAGACTGTATTAATGGCACTTTGTTTAATAGCATTACCTTTTATTCCTGCATCAAACCTTTTTTTTCCTGTTGGATTTGTTGTTGCTGAGCGAGTGCTATATGTTCCTAGCATGGGATTCTGTATTTTGGTAGCCCATGGATGGCAGAAAATTTCAAATAAAAGTGCATTTAAAAAGCTATCCTGGGCCTGTCTCTCAGTGGTGATACTTACTCATGCCTTAAAAACACTTCACAGAAATTGGGATTGGGAGTCTGAGTATACATTATTTATGTCAGCCTTGAAGGTAAATAAAAATAATGCCAAATTATGGAATAATGTTGGTCATGCTCTGGAAAATGAAAAGAACTTTGAGAGAGCTTTGAAATACTTCTTACAAGCTACCCACGTTCAGCCAGATGATATTGGTGCTCACATGAATGTAGGAAGAACTTACAAAAATTTAAATAGAACTAGAGAAGCTGAAGAATCTTACATGATGGCTAAGTCACTAATGCCTCAAATTATTCCTGGTAAAAAATACGCAGCCAGAATTGCCCCTAACCACCTAAATGTTTATATCAATCTGGCCAACCTGATCCGAGCAAATGAGTCCCGCCTAGAAGAAGCAGATCAGCTGTACCGACAAGCAATCAGCATGAGGCCTGACTTCAAGCAGGCTTATATTAGCAGGGGAGAATTGCTCTTAAAAATGAATAAGCCTCTCAAAGCAAAGGAAGCATATCTTAAAGCACTAGAGCTGGACAGAAATAATGCAGATCTTTGGTACAATTTGGCAATTGTGTATATTGAACTCAAAGAACCAAATGAAGCCCTAAAAAACTTCAATCATGCTTTAGAACTAAATCCAAGGCATAAGCTAGCATTATTCAATTCTGCTATATTAATGCAGGAATCAGGTGAAGTTAAACTCAGACCTGAAGCTAGAAAACGACTTCTGAACTATGTAAATGAAGAGCCATTAGATGCTAATGGTTATTTCAATTTGGGGATGCTTGCCATGGATGACAAAAAGGACACTGAGGCAGAGATTTGGATGAAGAAAGCCATTAAATTACAAGCTAACTTCAGAAGTGCTTTGTTTAATCTGGCTCTCCTCTATTCTCAGACTGCAAAGGAATTAAAGGCTCTGCCAATTTTAGAAGAGTTGCTCAAATACTACCCTGACCATATCAAGGGTCTCATTTTAAAAGGAGACATTCTGATGAATCAAAAGAAAGATATACTTGGAGCAAAAAAATGTTTTGAAAAAATCTTAGAGATGGATCCAACCAATGTCCAGGGGAAACACAATCTTTGTGTTGTTTATTTTGAAGAGAAAGACTTACTAAAAGCAGAAAGATGTCTGGTTGAAACATTGTCATTAGCACCACATGAAGAATATATTCAGCGCCATTTGAATATAGTCAGGGATAAAATCTCATCTGGTTTTGTAGAACAGCCAGTACTCCCACCTGGGAAGAATACAGATGAAGAAGGAGAAAACTTAATTCCAGCTGAAGATGTAAAGGAAATCAGAAGTGAGTCTAGACCAACACAGATAACGGAAACAAGTGATGATAAAAGTCAGTCTAAACCCAACAAACAATTGCAGAAAAATACAGACAAAGAGGTGCCTCAAAAAACAAAAGATATTAAAGAAATTGAGAAGAAAAGAGTTGCTGCTTTAAAAAGACTAGAAGAGATTGAACGTATTTTAAATGGGGAATAA

Related Sequences

XP_004867598.1 Protein

Tmtc3 PREDICTED: transmembrane and TPR repeat-containing protein 3 [Heterocephalus glaber]

Length: 914 aa      View alignments
>XP_004867598.1
MADINLKEVTLIVGVVIACYWNSLFCGFVFDDVSAILDNKDLHPSTPLKTLFQNDFWGTPMSEERSHKSYRPLTVLTFRLNYMFSELNPMSYHLLNMIFHAMVSVVFLKVCKLFLDNKSGLIAALLFVVHPVHTEAVTGVVGRAELLSSIFFLAAFLSYTKSKGPDNSIVWTPIALTVILVAIATLCKEQGITVVGICCVYEVFIAQGYTLPLLCTTAAQFLRGKSSIPFCLLQTLIKLIVLIFSTLLLVVIRVQVIQSQLPVFTRFDNPAAVSPTPTRQLTFNYLLPVNAWLLLNPSDLCCDWTMGTIPLIESFLDIRNLATFAFFCFLGVLGIFSLRYPGDSSKTVLMALCLIALPFIPASNLFFPVGFVVAERVLYVPSMGFCILVAHGWQKISNKSAFKKLSWACLSVVILTHALKTLHRNWDWESEYTLFMSALKVNKNNAKLWNNVGHALENEKNFERALKYFLQATHVQPDDIGAHMNVGRTYKNLNRTREAEESYMMAKSLMPQIIPGKKYAARIAPNHLNVYINLANLIRANESRLEEADQLYRQAISMRPDFKQAYISRGELLLKMNKPLKAKEAYLKALELDRNNADLWYNLAIVYIELKEPNEALKNFNHALELNPRHKLALFNSAILMQESGEVKLRPEARKRLLNYVNEEPLDANGYFNLGMLAMDDKKDTEAEIWMKKAIKLQANFRSALFNLALLYSQTAKELKALPILEELLKYYPDHIKGLILKGDILMNQKKDILGAKKCFEKILEMDPTNVQGKHNLCVVYFEEKDLLKAERCLVETLSLAPHEEYIQRHLNIVRDKISSGFVEQPVLPPGKNTDEEGENLIPAEDVKEIRSESRPTQITETSDDKSQSKPNKQLQKNTDKEVPQKTKDIKEIEKKRVAALKRLEEIERILNGE