Sequence details NCBI ID: XM_004867537.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Mgat4c
Gene Name mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)
Entrez Gene ID 101725010

Database interlinks

Part of NW_004624837.1 (Scaffold)

For more information consult the page for NW_004624837.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

MGAT4C ENSCPOG00000013992 (Guinea pig)

Gene Details

mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000012609, Guinea pig)

Protein Percentage 93.23%
CDS Percentage 92.39%
Ka/Ks Ratio 0.1328 (Ka = 0.0354, Ks = 0.2664)

MGAT4C ENSG00000182050 (Human)

Gene Details

mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)

External Links

Gene Match (Ensembl Protein ID: ENSP00000474896, Human)

Protein Percentage 94.96%
CDS Percentage 91.67%
Ka/Ks Ratio 0.06365 (Ka = 0.0251, Ks = 0.394)

Mgat4c ENSMUSG00000019888 (Mouse)

Gene Details

mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative)

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000135959, Mouse)

Protein Percentage 93.7%
CDS Percentage 88.1%
Ka/Ks Ratio 0.04778 (Ka = 0.0306, Ks = 0.6407)

Mgat4c ENSRNOG00000004149 (Rat)

Gene Details

mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme C (putative) (Mgat4c), mRNA

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000005523, Rat)

Protein Percentage 93.91%
CDS Percentage 88.73%
Ka/Ks Ratio 0.04664 (Ka = 0.0282, Ks = 0.6049)

Genome Location

Sequence Coding sequence

Length: 1431 bp    Location: 5159940..5143464   Strand: -
Raw sequence   
>XM_004867537.1
ATGATTAAATTTTATCAAATGAAAGATTTTTTTCAAATACTGGATAAAATGAGATGCTTGCGAAAACGCTCTACAGTGTCATTCTTAGGAGTTCTTATAATTTTCCTCCTGTTTATGAATTTGTACATTGAAGACAGTTATGTTCTGGAGGGTGACAAACAACTAATAAGGGAAACATCTACGCATCAACTAAATTCTGAACGCTATGTTCATACTTTCAAAGATTTATCTAATTTTTCAGGAGCCATAAATGTCACTTATCGCTATCTAGCTGCCACACCTTTACAAAGAAAGCGATATCTTACTATTGGACTTTCATCAGTGAAGCGAAGGAAAGGAAACTATTTACTTGAGACAATCAAATCAATTTTTGAGCAGTCCAGCTATGAAGAACTGAAGGAAATTTCAGTAGTGGTTCATTTAGCAGACTTTAATTCATCCTGGCGTGATATCATGGTGCAGGATATTACACAGAAATTTGCCCATCATATTATTGCAGGAAGATTAATGGTGATACACGCTCCAGAGGAATATTACCCAATCTTGGATGGTCTTAAAAGAAATTACAATGATCCAGAAGATAGAGTCAAATTTCGTTCCAAGCAAAATGTAGATTACGCTTTTCTGCTTAATTTCTGTGCCAACACTTCAGACTATTATGTGATGCTTGAAGACGATGTCCGATGTTCCAAAAATTTCTTAACTGCCATCAAGAAGGTTATTGCATCTTTAGAAGGAACTTACTGGGTAACTCTTGAGTTCTCTAAACTTGGCTACATTGGTAAACTCTATCATTCCCATGATCTCCCACGATTGGCACATTTTTTACTAATGTTTTATCAAGAAATGCCTTGTGATTGGCTATTGACCCATTTCCGGGGTCTGTTGGCTCAGAAAAATGTGATCCGATTTAAACCATCTCTCTTCCAGCACATGGGTTATTACTCCTCATATAAAGGAACTGAGAATAAGCTAAAGGATGATGATTTTGAAGAGGAGTCATTTGACATCCCCGATAACCCCCCTGCAAGTCTGTACACCAATATGAATGTGTTTGAAAATTATGAAGCAAGCAAAGCTTACAGCAGCGTTGATGAGTACTTTTGGGGAAAACCACCTTCCAAAGGAGATGTCTTTCTTATTGTCTTTGAAAACCCAATTATAATAAAAAAAATTAAAGTGAATACTGGAACAGAAGATCGGCAAAATGATATTTTGCATTATGGAGTCCTAGATGTTGGGAAAAAAATTAGTAAACAAATGAGAGAATGCGATACTTACTTAAGACTAGGGGAATTCAAAAATGGAAACTTTGAAATGTCAGAAGTTAATCAAAAAATTCCATTTGATGTATATTGTATTAGGATATGTGTGACTAAAACACAAAAGGAATGGCTGATTATTAGGAGTATTAGCATTTGGACTTCTTAG

Related Sequences

XP_004867594.1 Protein

Mgat4c PREDICTED: alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C [Heterocephalus glaber]

Length: 476 aa      View alignments
>XP_004867594.1
MIKFYQMKDFFQILDKMRCLRKRSTVSFLGVLIIFLLFMNLYIEDSYVLEGDKQLIRETSTHQLNSERYVHTFKDLSNFSGAINVTYRYLAATPLQRKRYLTIGLSSVKRRKGNYLLETIKSIFEQSSYEELKEISVVVHLADFNSSWRDIMVQDITQKFAHHIIAGRLMVIHAPEEYYPILDGLKRNYNDPEDRVKFRSKQNVDYAFLLNFCANTSDYYVMLEDDVRCSKNFLTAIKKVIASLEGTYWVTLEFSKLGYIGKLYHSHDLPRLAHFLLMFYQEMPCDWLLTHFRGLLAQKNVIRFKPSLFQHMGYYSSYKGTENKLKDDDFEEESFDIPDNPPASLYTNMNVFENYEASKAYSSVDEYFWGKPPSKGDVFLIVFENPIIIKKIKVNTGTEDRQNDILHYGVLDVGKKISKQMRECDTYLRLGEFKNGNFEMSEVNQKIPFDVYCIRICVTKTQKEWLIIRSISIWTS