Sequence details NCBI ID: XM_004867531.1 (Coding sequence)   Best Hit

Details from NCBI annotation

Gene Symbol Tmtc2
Gene Name transmembrane and tetratricopeptide repeat containing 2
Entrez Gene ID 101721941

Database interlinks

Part of NW_004624837.1 (Scaffold)

For more information consult the page for NW_004624837.1 (Scaffold)

Potential Gene Matches

The following genes have been identified as possible homologs of the naked mole-rat gene and compared to it.

TMTC2 ENSCPOG00000005425 (Guinea pig)

Gene Details

transmembrane and tetratricopeptide repeat containing 2

External Links

Gene Match (Ensembl Protein ID: ENSCPOP00000004882, Guinea pig)

Protein Percentage 90.68%
CDS Percentage 89.31%
Ka/Ks Ratio 0.19649 (Ka = 0.0613, Ks = 0.3122)

TMTC2 ENSG00000179104 (Human)

Gene Details

transmembrane and tetratricopeptide repeat containing 2

External Links

Gene Match (Ensembl Protein ID: ENSP00000322300, Human)

Protein Percentage 95.93%
CDS Percentage 92.54%
Ka/Ks Ratio 0.06528 (Ka = 0.0188, Ks = 0.2883)

Tmtc2 ENSMUSG00000036019 (Mouse)

Gene Details

transmembrane and tetratricopeptide repeat containing 2

External Links

Gene Match (Ensembl Protein ID: ENSMUSP00000061919, Mouse)

Protein Percentage 95.33%
CDS Percentage 88.64%
Ka/Ks Ratio 0.04078 (Ka = 0.0225, Ks = 0.5506)

Tmtc2 ENSRNOG00000004585 (Rat)

Gene Details

transmembrane and TPR repeat-containing protein 2 precursor

External Links

Gene Match (Ensembl Protein ID: ENSRNOP00000006086, Rat)

Protein Percentage 93.06%
CDS Percentage 86.36%
Ka/Ks Ratio 0.06163 (Ka = 0.04, Ks = 0.649)

Genome Location

Sequence Coding sequence

Length: 2511 bp    Location: 1998542..2398269   Strand: +
Raw sequence   
>XM_004867531.1
ATGATTGCAGAGTTGGTGAGCAGCGCTCTGGGGCTCGCCTTGTATCTCAACACCCTGAGCGCGGATTTCTGCTACGATGACAGCCGTGCTATCAAGACTAATCAGGACCTCCTCCGAGAAACTCCATGGACACACATTTTCTACAATGATTTTTGGGGGACTCTTCTAACACACAGCGGCAGCCACAAGTCCTACCGGCCTTTCTGCACTCTTTCCTTTCGCCTGAACCATGCCATTGGAGGCTTGAATCCCTGGAGCTACCATCTGGTCAATGTCCTATTGCATGCGGCTGTCACCGGTCTCTTCACGAGCTTCTCCAAGACCCTCCTGGGTGACGGATACTGGACATTCATGGCCGGTTTGATGTTCGCTTCTCACCCCATCCACACAGAGGCAGTGGCGGGAATCGTGGGCCGCGCTGATGTTGGGGCCAGTCTGTTCTTTCTCCTCTCCTTGCTCTGCTACATTAAACACTGTTCTACAAGAGGCTACTCAGCCAGGACCTGGGGCTGGTTCCTGGGCACTGGACTGTGTGCGGGGTGCAGCATGTTGTGGAAGGAACACGGAGTGACTGTTCTCGCAGTTTCCGCAGTTTATGATGTCTTTGTCTTTCACAGACTGAAAATGAAGCAGATCTTACCTGCCATTTACAAAAGGAAGAATTTGTCTCTTTTTCTCAGCGTTAGTTTGTTAACTTTCTGGGGGACCTCCCTTTTGGGAGCCCGGTTATACTGGATGGGAAACAAACCACCAAGCTTTTCCAACTCAGACAACCCAGCCGCAGATTCAGATAGCCTCCTGGCTCGTGCGCTTACCTTCTTCTATTTGCCAACCAAGAACCTCTGGTTGTTGCTCTGTCCAGATACCCTCAGTTTTGATTGGTCCATGGATGCCGTGCCTCTGCTGAAAACAATTTGTGATTGGAGAAACCTACACACTGTGGCCTTCTATACTGGACTCCTCCTCCTTGCCTACTATGGTTTGAAGAGCCCAAGCTTAGAAAGAGAATACAATGGGAAAGCTGTCACAAATGGCAAGCAGAATGCTAATGGACATAGCTGCCATTCAGATGTGGAGTACCGGAACTCAGAGATTAAGCCCAGCTTTGCCTCCAAAGCAGAAAATGGCATTAAAAATAATGTATCACAGACAACACAGCTCCCTTCTACAGAGAACATTGTTGTTCTGTCTTTATCTTTGTTGGTAATACCCTTTCTTCCTGCTACGAACTTGTTTTTCTATGTTGGCTTTGTAATTGCAGAGCGAGTATTATATATTCCTAGTATGGGCTTTTGCCTGCTGATTACAGTGGGTGCCAGAGCCCTTTATGTCAAAGTCCAAAAGCGGTTTCTCAAGAGCTTGATTTTTTATGCTACAGCTACATTAATTGTTTTCTATGGACTCAAGACTGTCATCAGGAATGGAGACTGGCAGAATGAGGAAATGCTGTATAGGTCTGGGATAAAAGTAAACCCAGCTAAAGCGTGGGGTAACCTTGGAAATGTTCTGAAGAGTCAGAGCAAAATTTCTGAAGCTGAAAGCGCCTATAGAAATGCTTTGTACCACCGCAGCAACATGGCTGACATGCTTTATAATTTAGGGTTGCTTCTCCAAGAGAACAGCAGGTTTGCAGAGGCCCTCCATTATTATAAACTGGCCATCGGGAGCAGGCCTACCCTGGCTTCTGCATATTTAAATACCGGCATTATTCTAATGAACCAAGGAAAGACCGAAGAAGCCCGGCGGACCTTCCTAAAGTGTTCTGAGATTCCAGATGAAAACCTGAAGGACCCTCATGCACACAAGAGCTCTGTTACCAGCTGCCTGTACAACCTGGGGAAACTCTATCACGAGCAGGGACACTATGAGGAAGCCCTGACTGTGTACAAGGAAGCAATTCAGAAAATGCCCCGACAGTTTGCCCCACAGAGTTTGTACAACATGATGGGTGAAGCATATATGCGAATGAGCAAGCTCCCTGAAGCAGAGCATTGGTATATGGAGTCCCTGAGATCCAAGACGGACCACATCCCTGCTCATCTCACCTATGGGAAGTTGCTAGCTCTCACGGGTCGTAAGAGTGAGGCTGAAAAGTTCTTCTTGAAGGCCATTGAGTTGGATCCCACCAAAGGAAACTGTTACATGCATTATGGTCAGTTTCTTCTGGAAGAAGCTCGCCTCTTAGAAGCGGCTGAGATGGCAAAAAAAGCAGCTGAACTAGACAGTACAGAGTTCGATGTTGTCTTCAATGCTGCCCACATGCTCAGACAGGCTAGCCTCAATGAAGAAGCCGAAAAGTATTACGATCTGGCAGCCAGACTCAGGCCTAATTATCCAGCAGCTCTGATGAACCTGGGAGCGATCCTGCACCTCAATGGCCGACTCCAGAAAGCGGAGGCCAACTACCTGCGCGCCCTGCAGCTCAAGCCAGATGATGTCATCACGCAGTCCAATCTTCGCAAGCTGTGGAACATCATGGAAAAGCAAGGCTTAAAGACTTCCAAGACCTGA

Related Sequences

XP_004867588.1 Protein

Tmtc2 PREDICTED: transmembrane and TPR repeat-containing protein 2-like [Heterocephalus glaber]

Length: 836 aa      View alignments
>XP_004867588.1
MIAELVSSALGLALYLNTLSADFCYDDSRAIKTNQDLLRETPWTHIFYNDFWGTLLTHSGSHKSYRPFCTLSFRLNHAIGGLNPWSYHLVNVLLHAAVTGLFTSFSKTLLGDGYWTFMAGLMFASHPIHTEAVAGIVGRADVGASLFFLLSLLCYIKHCSTRGYSARTWGWFLGTGLCAGCSMLWKEHGVTVLAVSAVYDVFVFHRLKMKQILPAIYKRKNLSLFLSVSLLTFWGTSLLGARLYWMGNKPPSFSNSDNPAADSDSLLARALTFFYLPTKNLWLLLCPDTLSFDWSMDAVPLLKTICDWRNLHTVAFYTGLLLLAYYGLKSPSLEREYNGKAVTNGKQNANGHSCHSDVEYRNSEIKPSFASKAENGIKNNVSQTTQLPSTENIVVLSLSLLVIPFLPATNLFFYVGFVIAERVLYIPSMGFCLLITVGARALYVKVQKRFLKSLIFYATATLIVFYGLKTVIRNGDWQNEEMLYRSGIKVNPAKAWGNLGNVLKSQSKISEAESAYRNALYHRSNMADMLYNLGLLLQENSRFAEALHYYKLAIGSRPTLASAYLNTGIILMNQGKTEEARRTFLKCSEIPDENLKDPHAHKSSVTSCLYNLGKLYHEQGHYEEALTVYKEAIQKMPRQFAPQSLYNMMGEAYMRMSKLPEAEHWYMESLRSKTDHIPAHLTYGKLLALTGRKSEAEKFFLKAIELDPTKGNCYMHYGQFLLEEARLLEAAEMAKKAAELDSTEFDVVFNAAHMLRQASLNEEAEKYYDLAARLRPNYPAALMNLGAILHLNGRLQKAEANYLRALQLKPDDVITQSNLRKLWNIMEKQGLKTSKT